RNA–Protein interactions for RNA: ENST00000380265.9

HERC6-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HERC6, Length 3,781 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-203ENST00000380265 JADE3Q92613 823 aa12.63□□□□□ -0.39
HERC6-203ENST00000380265 LIN28AQ9H9Z2 209 aaKnown RBP12.63□□□□□ -0.39
HERC6-203ENST00000380265 DDX56Q9NY93 547 aaKnown RBP12.63□□□□□ -0.39
HERC6-203ENST00000380265 AP4B1Q9Y6B7 739 aa12.63□□□□□ -0.39
HERC6-203ENST00000380265 A0A0B4J269 797 aa12.62□□□□□ -0.39
HERC6-203ENST00000380265 CXorf49A8MYA2 514 aaPredicted RBP12.62□□□□□ -0.39
HERC6-203ENST00000380265 H0YIN7 160 aa12.62□□□□□ -0.39
HERC6-203ENST00000380265 DCXO43602 365 aa12.62□□□□□ -0.39
HERC6-203ENST00000380265 PEX1O43933 1283 aa12.62□□□□□ -0.39
HERC6-203ENST00000380265 HDAC4P56524 1084 aa12.62□□□□□ -0.39
HERC6-203ENST00000380265 SLC18A2Q05940 514 aa12.62□□□□□ -0.39
HERC6-203ENST00000380265 CBX3Q13185 183 aa12.62□□□□□ -0.39
HERC6-203ENST00000380265 HNRNPDQ14103 355 aaKnown RBP12.62□□□□□ -0.39
HERC6-203ENST00000380265 HSF5Q4G112 596 aaPredicted RBP12.62□□□□□ -0.39
HERC6-203ENST00000380265 FASTKD1Q53R41 847 aaKnown RBP12.62□□□□□ -0.39
HERC6-203ENST00000380265 TTC13Q8NBP0 860 aa12.62□□□□□ -0.39
HERC6-203ENST00000380265 C20orf27Q9GZN8 174 aa12.62□□□□□ -0.39
HERC6-203ENST00000380265 BLOC1S6Q9UL45 172 aa12.62□□□□□ -0.39
HERC6-203ENST00000380265 POLIQ9UNA4 740 aa12.62□□□□□ -0.39
HERC6-203ENST00000380265 MRPL11Q9Y3B7 192 aaKnown RBP12.62□□□□□ -0.39
HERC6-203ENST00000380265 ARFGEF1Q9Y6D6 1849 aa12.62□□□□□ -0.39
HERC6-203ENST00000380265 VILLO15195 856 aa12.62□□□□□ -0.39
HERC6-203ENST00000380265 ATP9BO43861 1147 aa12.62□□□□□ -0.39
HERC6-203ENST00000380265 TBC1D12O60347 775 aa12.62□□□□□ -0.39
HERC6-203ENST00000380265 CD48P09326 243 aa12.62□□□□□ -0.39
HERC6-203ENST00000380265 OGDHQ02218 1023 aa12.62□□□□□ -0.39
HERC6-203ENST00000380265 DPYSL3Q14195 570 aa12.62□□□□□ -0.39
HERC6-203ENST00000380265 MYLK3Q32MK0 819 aa12.62□□□□□ -0.39
HERC6-203ENST00000380265 SCARA5Q6ZMJ2 495 aa12.62□□□□□ -0.39
HERC6-203ENST00000380265 EMC1Q8N766 993 aa12.62□□□□□ -0.39
HERC6-203ENST00000380265 TMC2Q8TDI7 906 aa12.62□□□□□ -0.39
HERC6-203ENST00000380265 LZICQ8WZA0 190 aa12.62□□□□□ -0.39
HERC6-203ENST00000380265 CEP170P1Q96L14 293 aa12.62□□□□□ -0.39
HERC6-203ENST00000380265 PRICKLE1Q96MT3 831 aaPredicted RBP12.62□□□□□ -0.39
HERC6-203ENST00000380265 TMEM191CA6NGB0 347 aa12.61□□□□□ -0.39
HERC6-203ENST00000380265 ZNF189O75820 626 aaPredicted RBP12.61□□□□□ -0.39
HERC6-203ENST00000380265 DGKIO75912 1065 aa12.61□□□□□ -0.39
HERC6-203ENST00000380265 TFAP2AP05549 437 aa12.61□□□□□ -0.39
HERC6-203ENST00000380265 TMEM191BP0C7N4 346 aa12.61□□□□□ -0.39
HERC6-203ENST00000380265 C1QBPQ07021 282 aaKnown RBP12.61□□□□□ -0.39
HERC6-203ENST00000380265 SEZ6Q53EL9 994 aa12.61□□□□□ -0.39
HERC6-203ENST00000380265 C6orf52Q5T4I8 152 aa12.61□□□□□ -0.39
HERC6-203ENST00000380265 BSPRYQ5W0U4 402 aa12.61□□□□□ -0.39
HERC6-203ENST00000380265 PDPK2PQ6A1A2 396 aa12.61□□□□□ -0.39
HERC6-203ENST00000380265 UGT2A3Q6UWM9 527 aa12.61□□□□□ -0.39
HERC6-203ENST00000380265 AMIGO2Q86SJ2 522 aa12.61□□□□□ -0.39
HERC6-203ENST00000380265 ZNF554Q86TJ5 538 aa12.61□□□□□ -0.39
HERC6-203ENST00000380265 SLC35B2Q8TB61 432 aa12.61□□□□□ -0.39
HERC6-203ENST00000380265 DEPDC1BQ8WUY9 529 aa12.61□□□□□ -0.39
HERC6-203ENST00000380265 ZNF606Q8WXB4 792 aa12.61□□□□□ -0.39
HERC6-203ENST00000380265 DHRS4Q9BTZ2 278 aa12.61□□□□□ -0.39
HERC6-203ENST00000380265 COPS7BQ9H9Q2 264 aaPredicted RBP12.61□□□□□ -0.39
HERC6-203ENST00000380265 FETUBQ9UGM5 382 aa12.61□□□□□ -0.39
HERC6-203ENST00000380265 TTLL13PA6NNM8 815 aa12.61□□□□□ -0.39
HERC6-203ENST00000380265 E9PBE3 544 aa12.61□□□□□ -0.39
HERC6-203ENST00000380265 H3BSA7 217 aa12.61□□□□□ -0.39
HERC6-203ENST00000380265 KLHL41O60662 606 aa12.61□□□□□ -0.39
HERC6-203ENST00000380265 CALB1P05937 261 aa12.61□□□□□ -0.39
HERC6-203ENST00000380265 CDK4P11802 303 aa12.61□□□□□ -0.39
HERC6-203ENST00000380265 GK3PQ14409 553 aa12.61□□□□□ -0.39
HERC6-203ENST00000380265 NPNTQ6UXI9 565 aa12.61□□□□□ -0.39
HERC6-203ENST00000380265 CCDC33Q8N5R6 958 aa12.61□□□□□ -0.39
HERC6-203ENST00000380265 PIWIL2Q8TC59 973 aaKnown RBP12.61□□□□□ -0.39
HERC6-203ENST00000380265 CMTM5Q96DZ9 223 aa12.61□□□□□ -0.39
HERC6-203ENST00000380265 CCT7Q99832 543 aa12.61□□□□□ -0.39
HERC6-203ENST00000380265 MXRA8Q9BRK3 442 aa12.61□□□□□ -0.39
HERC6-203ENST00000380265 MAN1C1Q9NR34 630 aa12.61□□□□□ -0.39
HERC6-203ENST00000380265 THAP1Q9NVV9 213 aa12.61□□□□□ -0.39
HERC6-203ENST00000380265 THEGQ9P2T0 379 aa12.61□□□□□ -0.39
HERC6-203ENST00000380265 CCNL1Q9UK58 526 aaPredicted RBP12.61□□□□□ -0.39
HERC6-203ENST00000380265 HEY1Q9Y5J3 304 aa12.61□□□□□ -0.39
HERC6-203ENST00000380265 SRCAPQ6ZRS2 3230 aa12.61□□□□□ -0.39
HERC6-203ENST00000380265 SIN3BO75182 1162 aa12.61□□□□□ -0.39
HERC6-203ENST00000380265 TRMUO75648 421 aaKnown RBP12.61□□□□□ -0.39
HERC6-203ENST00000380265 TNFAIP8O95379 198 aa12.61□□□□□ -0.39
HERC6-203ENST00000380265 ITGB5P18084 799 aa12.61□□□□□ -0.39
HERC6-203ENST00000380265 TCN1P20061 433 aaPredicted RBP12.61□□□□□ -0.39
HERC6-203ENST00000380265 ROR1Q01973 937 aa12.61□□□□□ -0.39
HERC6-203ENST00000380265 SFSWAPQ12872 951 aaKnown RBP12.61□□□□□ -0.39
HERC6-203ENST00000380265 PDE1CQ14123 709 aaPredicted RBP12.61□□□□□ -0.39
HERC6-203ENST00000380265 PDK1Q15118 436 aa12.61□□□□□ -0.39
HERC6-203ENST00000380265 KCTD21Q4G0X4 260 aa12.61□□□□□ -0.39
HERC6-203ENST00000380265 SIAH1Q8IUQ4 282 aa12.61□□□□□ -0.39
HERC6-203ENST00000380265 TMEM161BQ8NDZ6 487 aa12.61□□□□□ -0.39
HERC6-203ENST00000380265 CSRNP1Q96S65 589 aa12.61□□□□□ -0.39
HERC6-203ENST00000380265 ZDHHC7Q9NXF8 308 aa12.61□□□□□ -0.39
HERC6-203ENST00000380265 CNTN3Q9P232 1028 aa12.61□□□□□ -0.39
HERC6-203ENST00000380265 HERC5Q9UII4 1024 aaKnown RBP12.61□□□□□ -0.39
HERC6-203ENST00000380265 PCDHGB4Q9UN71 923 aa12.61□□□□□ -0.39
HERC6-203ENST00000380265 PCDHGB5Q9Y5G0 923 aa12.61□□□□□ -0.39
HERC6-203ENST00000380265 ITM2AO43736 263 aa12.6□□□□□ -0.39
HERC6-203ENST00000380265 MAPTP10636 758 aaKnown RBP12.6□□□□□ -0.39
HERC6-203ENST00000380265 PIGHQ14442 188 aaPredicted RBP12.6□□□□□ -0.39
HERC6-203ENST00000380265 UGCGQ16739 394 aa12.6□□□□□ -0.39
HERC6-203ENST00000380265 SH3D19Q5HYK7 790 aa12.6□□□□□ -0.39
HERC6-203ENST00000380265 PTF1AQ7RTS3 328 aa12.6□□□□□ -0.39
HERC6-203ENST00000380265 PHF13Q86YI8 300 aaPredicted RBP12.6□□□□□ -0.39
HERC6-203ENST00000380265 PQLC1Q8N2U9 271 aa12.6□□□□□ -0.39
HERC6-203ENST00000380265 TMEM35BQ8NCS4 154 aa12.6□□□□□ -0.39
HERC6-203ENST00000380265 KCNK16Q96T55 309 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms