RNA–Protein interactions for RNA: ENST00000380176.7

PDLIM5-204, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best)

Gene PDLIM5, Length 3,098 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-204ENST00000380176 SPAG7O75391 227 aa8.32□□□□□ -1.08
PDLIM5-204ENST00000380176 CELF2O95319 508 aaKnown RBP8.32□□□□□ -1.08
PDLIM5-204ENST00000380176 CPP00450 1065 aa8.32□□□□□ -1.08
PDLIM5-204ENST00000380176 CCDC130P13994 396 aa8.32□□□□□ -1.08
PDLIM5-204ENST00000380176 DARSP14868 501 aaKnown RBP8.32□□□□□ -1.08
PDLIM5-204ENST00000380176 IGFBP6P24592 240 aaPredicted RBP8.32□□□□□ -1.08
PDLIM5-204ENST00000380176 ATP5DP30049 168 aa8.32□□□□□ -1.08
PDLIM5-204ENST00000380176 ATXN1P54253 815 aaKnown RBP8.32□□□□□ -1.08
PDLIM5-204ENST00000380176 BEX3Q00994 111 aa8.32□□□□□ -1.08
PDLIM5-204ENST00000380176 EFTUD2Q15029 972 aaKnown RBP eCLIP8.32□□□□□ -1.08
PDLIM5-204ENST00000380176 PKN2Q16513 984 aaKnown RBP8.32□□□□□ -1.08
PDLIM5-204ENST00000380176 HIF1AQ16665 826 aa8.32□□□□□ -1.08
PDLIM5-204ENST00000380176 C1orf228Q6PIY5 440 aa8.32□□□□□ -1.08
PDLIM5-204ENST00000380176 CENPUQ71F23 418 aa8.32□□□□□ -1.08
PDLIM5-204ENST00000380176 SESTD1Q86VW0 696 aa8.32□□□□□ -1.08
PDLIM5-204ENST00000380176 PPIL6Q8IXY8 311 aa8.32□□□□□ -1.08
PDLIM5-204ENST00000380176 OR6B3Q8NGW1 331 aa8.32□□□□□ -1.08
PDLIM5-204ENST00000380176 CCDC77Q9BR77 488 aa8.32□□□□□ -1.08
PDLIM5-204ENST00000380176 SLC4A5Q9BY07 1137 aa8.32□□□□□ -1.08
PDLIM5-204ENST00000380176 RSAD1Q9HA92 442 aa8.32□□□□□ -1.08
PDLIM5-204ENST00000380176 UBN1Q9NPG3 1134 aa8.32□□□□□ -1.08
PDLIM5-204ENST00000380176 FGFR1OP2Q9NVK5 253 aa8.32□□□□□ -1.08
PDLIM5-204ENST00000380176 MBLAC1A4D2B0 266 aaPredicted RBP8.31□□□□□ -1.08
PDLIM5-204ENST00000380176 PRPSAP2O60256 369 aa8.31□□□□□ -1.08
PDLIM5-204ENST00000380176 FSBPO95073 299 aa8.31□□□□□ -1.08
PDLIM5-204ENST00000380176 YARSP54577 528 aaKnown RBP8.31□□□□□ -1.08
PDLIM5-204ENST00000380176 SOX4Q06945 474 aaPredicted RBP8.31□□□□□ -1.08
PDLIM5-204ENST00000380176 NOTUMQ6P988 496 aa8.31□□□□□ -1.08
PDLIM5-204ENST00000380176 CCDC121Q6ZUS5 278 aa8.31□□□□□ -1.08
PDLIM5-204ENST00000380176 TMEM110Q86TL2 294 aa8.31□□□□□ -1.08
PDLIM5-204ENST00000380176 TLK2Q86UE8 772 aa8.31□□□□□ -1.08
PDLIM5-204ENST00000380176 FAM172AQ8WUF8 416 aa8.31□□□□□ -1.08
PDLIM5-204ENST00000380176 KBTBD7Q8WVZ9 684 aa8.31□□□□□ -1.08
PDLIM5-204ENST00000380176 CCT6BQ92526 530 aa8.31□□□□□ -1.08
PDLIM5-204ENST00000380176 TRIM6Q9C030 488 aaPredicted RBP8.31□□□□□ -1.08
PDLIM5-204ENST00000380176 CNTN3Q9P232 1028 aa8.31□□□□□ -1.08
PDLIM5-204ENST00000380176 PIN4Q9Y237 131 aaKnown RBP8.31□□□□□ -1.08
PDLIM5-204ENST00000380176 SMIM28A0A1B0GU29 152 aa8.31□□□□□ -1.08
PDLIM5-204ENST00000380176 SMIM35A0A1B0GVV1 85 aa8.31□□□□□ -1.08
PDLIM5-204ENST00000380176 A0A1W2PPM1 405 aa8.31□□□□□ -1.08
PDLIM5-204ENST00000380176 SLC15A5A6NIM6 579 aa8.31□□□□□ -1.08
PDLIM5-204ENST00000380176 A8MXQ7 604 aa8.31□□□□□ -1.08
PDLIM5-204ENST00000380176 MCF2LO15068 1137 aa8.31□□□□□ -1.08
PDLIM5-204ENST00000380176 ZNF865P0CJ78 1059 aaPredicted RBP8.31□□□□□ -1.08
PDLIM5-204ENST00000380176 C7P10643 843 aa8.31□□□□□ -1.08
PDLIM5-204ENST00000380176 ADAM17P78536 824 aa8.31□□□□□ -1.08
PDLIM5-204ENST00000380176 BASP1P80723 227 aaKnown RBP8.31□□□□□ -1.08
PDLIM5-204ENST00000380176 SLC6A3Q01959 620 aa8.31□□□□□ -1.08
PDLIM5-204ENST00000380176 SNX17Q15036 470 aa8.31□□□□□ -1.08
PDLIM5-204ENST00000380176 NOMO1Q15155 1222 aa8.31□□□□□ -1.08
PDLIM5-204ENST00000380176 MORN1Q5T089 497 aa8.31□□□□□ -1.08
PDLIM5-204ENST00000380176 TRABD2AQ86V40 505 aa8.31□□□□□ -1.08
PDLIM5-204ENST00000380176 IGDCC3Q8IVU1 814 aa8.31□□□□□ -1.08
PDLIM5-204ENST00000380176 PQLC3Q8N755 202 aa8.31□□□□□ -1.08
PDLIM5-204ENST00000380176 CCDC197Q8NCU1 140 aa8.31□□□□□ -1.08
PDLIM5-204ENST00000380176 BEST2Q8NFU1 509 aa8.31□□□□□ -1.08
PDLIM5-204ENST00000380176 CKAP2Q8WWK9 683 aa8.31□□□□□ -1.08
PDLIM5-204ENST00000380176 RNF157Q96PX1 679 aa8.31□□□□□ -1.08
PDLIM5-204ENST00000380176 MAK16Q9BXY0 300 aaKnown RBP8.31□□□□□ -1.08
PDLIM5-204ENST00000380176 GGT7Q9UJ14 662 aa8.31□□□□□ -1.08
PDLIM5-204ENST00000380176 DERAQ9Y315 318 aa8.31□□□□□ -1.08
PDLIM5-204ENST00000380176 GOLGA6L7A0A1B0GV03 622 aa8.31□□□□□ -1.08
PDLIM5-204ENST00000380176 PIRO00625 290 aa8.31□□□□□ -1.08
PDLIM5-204ENST00000380176 AP1G2O75843 785 aa8.31□□□□□ -1.08
PDLIM5-204ENST00000380176 ADORA2BP29275 332 aa8.31□□□□□ -1.08
PDLIM5-204ENST00000380176 HDAC4P56524 1084 aa8.31□□□□□ -1.08
PDLIM5-204ENST00000380176 WDR4P57081 412 aaKnown RBP8.31□□□□□ -1.08
PDLIM5-204ENST00000380176 ACTN3Q08043 901 aaPredicted RBP8.31□□□□□ -1.08
PDLIM5-204ENST00000380176 SETDB1Q15047 1291 aa8.31□□□□□ -1.08
PDLIM5-204ENST00000380176 TTC31Q49AM3 519 aaPredicted RBP8.31□□□□□ -1.08
PDLIM5-204ENST00000380176 ANKRD20A8PQ5CZ79 823 aa8.31□□□□□ -1.08
PDLIM5-204ENST00000380176 UBXN11Q5T124 520 aa8.31□□□□□ -1.08
PDLIM5-204ENST00000380176 NUGGCQ68CJ6 796 aa8.31□□□□□ -1.08
PDLIM5-204ENST00000380176 DARS2Q6PI48 645 aaKnown RBP8.31□□□□□ -1.08
PDLIM5-204ENST00000380176 C4orf33Q8N1A6 199 aa8.31□□□□□ -1.08
PDLIM5-204ENST00000380176 PLD5Q8N7P1 536 aa8.31□□□□□ -1.08
PDLIM5-204ENST00000380176 ARRDC4Q8NCT1 418 aa8.31□□□□□ -1.08
PDLIM5-204ENST00000380176 P3H4Q92791 437 aa8.31□□□□□ -1.08
PDLIM5-204ENST00000380176 TTC25Q96NG3 672 aa8.31□□□□□ -1.08
PDLIM5-204ENST00000380176 SNRNP25Q9BV90 132 aaKnown RBP8.31□□□□□ -1.08
PDLIM5-204ENST00000380176 FRMD8P1Q9BZ68 369 aaPredicted RBP8.31□□□□□ -1.08
PDLIM5-204ENST00000380176 XPO7Q9UIA9 1087 aaKnown RBP8.31□□□□□ -1.08
PDLIM5-204ENST00000380176 RABGEF1Q9UJ41 708 aa8.31□□□□□ -1.08
PDLIM5-204ENST00000380176 HEY1Q9Y5J3 304 aa8.31□□□□□ -1.08
PDLIM5-204ENST00000380176 IGF2BP3O00425 579 aaKnown RBP eCLIP8.3□□□□□ -1.08
PDLIM5-204ENST00000380176 SNX3O60493 162 aa8.3□□□□□ -1.08
PDLIM5-204ENST00000380176 FOXN2P32314 431 aa8.3□□□□□ -1.08
PDLIM5-204ENST00000380176 ROR1Q01973 937 aa8.3□□□□□ -1.08
PDLIM5-204ENST00000380176 KRT81Q14533 505 aa8.3□□□□□ -1.08
PDLIM5-204ENST00000380176 STILQ15468 1287 aa8.3□□□□□ -1.08
PDLIM5-204ENST00000380176 FBXO47Q5MNV8 452 aa8.3□□□□□ -1.08
PDLIM5-204ENST00000380176 CEP128Q6ZU80 1094 aa8.3□□□□□ -1.08
PDLIM5-204ENST00000380176 C3orf62Q6ZUJ4 267 aa8.3□□□□□ -1.08
PDLIM5-204ENST00000380176 PCGF5Q86SE9 256 aa8.3□□□□□ -1.08
PDLIM5-204ENST00000380176 TTC39CQ8N584 583 aa8.3□□□□□ -1.08
PDLIM5-204ENST00000380176 CCDC33Q8N5R6 958 aa8.3□□□□□ -1.08
PDLIM5-204ENST00000380176 LRRC52Q8N7C0 313 aa8.3□□□□□ -1.08
PDLIM5-204ENST00000380176 FBXO36Q8NEA4 188 aa8.3□□□□□ -1.08
PDLIM5-204ENST00000380176 PCDH19Q8TAB3 1148 aa8.3□□□□□ -1.08
PDLIM5-204ENST00000380176 PYROXD1Q8WU10 500 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms