RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 SCINQ9Y6U3 715 aa7.77□□□□□ -1.17
CDKL5-201ENST00000379989 FAM170AA1A519 330 aa7.77□□□□□ -1.17
CDKL5-201ENST00000379989 ENPP3O14638 875 aa7.77□□□□□ -1.17
CDKL5-201ENST00000379989 TCEA3O75764 348 aa7.77□□□□□ -1.17
CDKL5-201ENST00000379989 CRTAMO95727 393 aa7.77□□□□□ -1.17
CDKL5-201ENST00000379989 KRT13P13646 458 aa7.77□□□□□ -1.17
CDKL5-201ENST00000379989 AKR1B1P15121 316 aa7.77□□□□□ -1.17
CDKL5-201ENST00000379989 EPHA7Q15375 998 aa7.77□□□□□ -1.17
CDKL5-201ENST00000379989 CALCRLQ16602 461 aa7.77□□□□□ -1.17
CDKL5-201ENST00000379989 NAALADL2Q58DX5 795 aa7.77□□□□□ -1.17
CDKL5-201ENST00000379989 RNF19BQ6ZMZ0 732 aa7.77□□□□□ -1.17
CDKL5-201ENST00000379989 SV2BQ7L1I2 683 aa7.77□□□□□ -1.17
CDKL5-201ENST00000379989 NIPA1Q7RTP0 329 aa7.77□□□□□ -1.17
CDKL5-201ENST00000379989 RALGPS2Q86X27 583 aaPredicted RBP7.77□□□□□ -1.17
CDKL5-201ENST00000379989 CAPSLQ8WWF8 208 aa7.77□□□□□ -1.17
CDKL5-201ENST00000379989 HSPH1Q92598 858 aa7.77□□□□□ -1.17
CDKL5-201ENST00000379989 ACAP3Q96P50 834 aa7.77□□□□□ -1.17
CDKL5-201ENST00000379989 NUF2Q9BZD4 464 aa7.77□□□□□ -1.17
CDKL5-201ENST00000379989 JMJD4Q9H9V9 463 aa7.77□□□□□ -1.17
CDKL5-201ENST00000379989 KIAA1586Q9HCI6 787 aa7.77□□□□□ -1.17
CDKL5-201ENST00000379989 C12orf4Q9NQ89 552 aa7.77□□□□□ -1.17
CDKL5-201ENST00000379989 KCND2Q9NZV8 630 aa7.77□□□□□ -1.17
CDKL5-201ENST00000379989 ANKFY1Q9P2R3 1169 aa7.77□□□□□ -1.17
CDKL5-201ENST00000379989 FER1L6Q2WGJ9 1857 aa7.77□□□□□ -1.17
CDKL5-201ENST00000379989 A0A1W2PRG0 241 aa7.76□□□□□ -1.17
CDKL5-201ENST00000379989 GOLGA8IPA6NC78 632 aa7.76□□□□□ -1.17
CDKL5-201ENST00000379989 CENPBD1B2RD01 187 aa7.76□□□□□ -1.17
CDKL5-201ENST00000379989 DDX3YO15523 660 aaKnown RBP7.76□□□□□ -1.17
CDKL5-201ENST00000379989 JAK1P23458 1154 aa7.76□□□□□ -1.17
CDKL5-201ENST00000379989 PRDX6P30041 224 aa7.76□□□□□ -1.17
CDKL5-201ENST00000379989 IREB2P48200 963 aaKnown RBP7.76□□□□□ -1.17
CDKL5-201ENST00000379989 PPP2R2BQ00005 443 aa7.76□□□□□ -1.17
CDKL5-201ENST00000379989 CDK16Q00536 496 aa7.76□□□□□ -1.17
CDKL5-201ENST00000379989 SLC1A5Q15758 541 aa7.76□□□□□ -1.17
CDKL5-201ENST00000379989 SPDYE2Q495Y8 402 aa7.76□□□□□ -1.17
CDKL5-201ENST00000379989 ZFYVE27Q5T4F4 411 aa7.76□□□□□ -1.17
CDKL5-201ENST00000379989 TTC27Q6P3X3 843 aa7.76□□□□□ -1.17
CDKL5-201ENST00000379989 PRUNE1Q86TP1 453 aa7.76□□□□□ -1.17
CDKL5-201ENST00000379989 HEATR4Q86WZ0 1026 aa7.76□□□□□ -1.17
CDKL5-201ENST00000379989 HACE1Q8IYU2 909 aa7.76□□□□□ -1.17
CDKL5-201ENST00000379989 CMTR1Q8N1G2 835 aaKnown RBP7.76□□□□□ -1.17
CDKL5-201ENST00000379989 ATL1Q8WXF7 558 aa7.76□□□□□ -1.17
CDKL5-201ENST00000379989 ZNF75CPQ92670 426 aaPredicted RBP7.76□□□□□ -1.17
CDKL5-201ENST00000379989 DCUN1D1Q96GG9 259 aa7.76□□□□□ -1.17
CDKL5-201ENST00000379989 DHRS9Q9BPW9 319 aa7.76□□□□□ -1.17
CDKL5-201ENST00000379989 KCNQ5Q9NR82 932 aa7.76□□□□□ -1.17
CDKL5-201ENST00000379989 MTPAPQ9NVV4 582 aaKnown RBP eCLIP7.76□□□□□ -1.17
CDKL5-201ENST00000379989 STK39Q9UEW8 545 aa7.76□□□□□ -1.17
CDKL5-201ENST00000379989 ZNRF3Q9ULT6 936 aa7.76□□□□□ -1.17
CDKL5-201ENST00000379989 INPP5FQ9Y2H2 1132 aa7.76□□□□□ -1.17
CDKL5-201ENST00000379989 DTNAQ9Y4J8 743 aa7.76□□□□□ -1.17
CDKL5-201ENST00000379989 AP4B1Q9Y6B7 739 aa7.76□□□□□ -1.17
CDKL5-201ENST00000379989 RIMBP2O15034 1052 aa7.76□□□□□ -1.17
CDKL5-201ENST00000379989 TP73O15350 636 aa7.76□□□□□ -1.17
CDKL5-201ENST00000379989 CDH16O75309 829 aa7.76□□□□□ -1.17
CDKL5-201ENST00000379989 GABBR2O75899 941 aa7.76□□□□□ -1.17
CDKL5-201ENST00000379989 FKBP9O95302 570 aa7.76□□□□□ -1.17
CDKL5-201ENST00000379989 TTC4O95801 387 aa7.76□□□□□ -1.17
CDKL5-201ENST00000379989 FAM58BPP0C7Q3 252 aa7.76□□□□□ -1.17
CDKL5-201ENST00000379989 TGFB3P10600 412 aa7.76□□□□□ -1.17
CDKL5-201ENST00000379989 CCDC130P13994 396 aa7.76□□□□□ -1.17
CDKL5-201ENST00000379989 BMPR1AP36894 532 aa7.76□□□□□ -1.17
CDKL5-201ENST00000379989 SLC1A1P43005 524 aa7.76□□□□□ -1.17
CDKL5-201ENST00000379989 P2RX3P56373 397 aa7.76□□□□□ -1.17
CDKL5-201ENST00000379989 ZNF200P98182 395 aaPredicted RBP7.76□□□□□ -1.17
CDKL5-201ENST00000379989 ZBTB16Q05516 673 aa7.76□□□□□ -1.17
CDKL5-201ENST00000379989 KLHL30Q0D2K2 578 aa7.76□□□□□ -1.17
CDKL5-201ENST00000379989 TRIM16LQ309B1 348 aa7.76□□□□□ -1.17
CDKL5-201ENST00000379989 TMEM119Q4V9L6 283 aa7.76□□□□□ -1.17
CDKL5-201ENST00000379989 OGFRL1Q5TC84 451 aaPredicted RBP7.76□□□□□ -1.17
CDKL5-201ENST00000379989 SLFN13Q68D06 897 aa7.76□□□□□ -1.17
CDKL5-201ENST00000379989 SLC30A10Q6XR72 485 aa7.76□□□□□ -1.17
CDKL5-201ENST00000379989 KYAT3Q6YP21 454 aaKnown RBP7.76□□□□□ -1.17
CDKL5-201ENST00000379989 GPR180Q86V85 440 aa7.76□□□□□ -1.17
CDKL5-201ENST00000379989 ADGRF4Q8IZF3 695 aa7.76□□□□□ -1.17
CDKL5-201ENST00000379989 GUF1Q8N442 669 aaKnown RBP7.76□□□□□ -1.17
CDKL5-201ENST00000379989 CCDC24Q8N4L8 307 aa7.76□□□□□ -1.17
CDKL5-201ENST00000379989 LPAR1Q92633 364 aa7.76□□□□□ -1.17
CDKL5-201ENST00000379989 ZBED3Q96IU2 234 aaPredicted RBP7.76□□□□□ -1.17
CDKL5-201ENST00000379989 WNK4Q96J92 1243 aa7.76□□□□□ -1.17
CDKL5-201ENST00000379989 ZNF512Q96ME7 567 aaPredicted RBP7.76□□□□□ -1.17
CDKL5-201ENST00000379989 TTC25Q96NG3 672 aa7.76□□□□□ -1.17
CDKL5-201ENST00000379989 PIGSQ96S52 555 aa7.76□□□□□ -1.17
CDKL5-201ENST00000379989 CIB1Q99828 191 aa7.76□□□□□ -1.17
CDKL5-201ENST00000379989 ZBED2Q9BTP6 218 aa7.76□□□□□ -1.17
CDKL5-201ENST00000379989 HERC2P3Q9BVR0 1158 aa7.76□□□□□ -1.17
CDKL5-201ENST00000379989 MXD3Q9BW11 206 aa7.76□□□□□ -1.17
CDKL5-201ENST00000379989 TP63Q9H3D4 680 aaPredicted RBP7.76□□□□□ -1.17
CDKL5-201ENST00000379989 KCNK13Q9HB14 408 aa7.76□□□□□ -1.17
CDKL5-201ENST00000379989 WDR6Q9NNW5 1121 aaKnown RBP7.76□□□□□ -1.17
CDKL5-201ENST00000379989 DSEQ9UL01 958 aa7.76□□□□□ -1.17
CDKL5-201ENST00000379989 CDH7Q9ULB5 785 aa7.76□□□□□ -1.17
CDKL5-201ENST00000379989 TMX2Q9Y320 296 aa7.76□□□□□ -1.17
CDKL5-201ENST00000379989 PPP2R3BQ9Y5P8 575 aa7.76□□□□□ -1.17
CDKL5-201ENST00000379989 ATP8B3O60423 1300 aa7.76□□□□□ -1.17
CDKL5-201ENST00000379989 UBE4BO95155 1302 aa7.76□□□□□ -1.17
CDKL5-201ENST00000379989 SPDYE2BA6NHP3 402 aa7.76□□□□□ -1.17
CDKL5-201ENST00000379989 USP17L5A8MUK1 530 aa7.76□□□□□ -1.17
CDKL5-201ENST00000379989 POTECB2RU33 542 aa7.76□□□□□ -1.17
CDKL5-201ENST00000379989 PSMD12O00232 456 aaPredicted RBP7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms