RNA–Protein interactions for RNA: ENST00000379361.4

PTCHD1-201, Transcript of patched domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD1, Length 13,714 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1-201ENST00000379361 RSAD1Q9HA92 442 aa11.58□□□□□ -0.56
PTCHD1-201ENST00000379361 GPN3Q9UHW5 284 aaPredicted RBP11.58□□□□□ -0.56
PTCHD1-201ENST00000379361 PCDHB9Q9Y5E1 797 aa11.58□□□□□ -0.56
PTCHD1-201ENST00000379361 TGM2P21980 687 aa11.58□□□□□ -0.56
PTCHD1-201ENST00000379361 EMC2Q15006 297 aa11.58□□□□□ -0.56
PTCHD1-201ENST00000379361 ATF7IP2Q5U623 682 aa11.58□□□□□ -0.56
PTCHD1-201ENST00000379361 OR8H2Q8N162 312 aa11.58□□□□□ -0.56
PTCHD1-201ENST00000379361 OR52L1Q8NGH7 329 aa11.58□□□□□ -0.56
PTCHD1-201ENST00000379361 PPP1R16AQ96I34 528 aa11.58□□□□□ -0.56
PTCHD1-201ENST00000379361 COMMD8Q9NX08 183 aa11.58□□□□□ -0.56
PTCHD1-201ENST00000379361 RGS7P49802 495 aa11.58□□□□□ -0.56
PTCHD1-201ENST00000379361 RUVBL2Q9Y230 463 aaKnown RBP11.58□□□□□ -0.56
PTCHD1-201ENST00000379361 MAGEA9P43362 315 aa11.58□□□□□ -0.56
PTCHD1-201ENST00000379361 FAM117BQ6P1L5 589 aa11.58□□□□□ -0.56
PTCHD1-201ENST00000379361 SUGP1Q8IWZ8 645 aaKnown RBP11.58□□□□□ -0.56
PTCHD1-201ENST00000379361 DDHD1Q8NEL9 900 aa11.58□□□□□ -0.56
PTCHD1-201ENST00000379361 EAF2Q96CJ1 260 aaPredicted RBP11.58□□□□□ -0.56
PTCHD1-201ENST00000379361 CEP44Q9C0F1 390 aa11.58□□□□□ -0.56
PTCHD1-201ENST00000379361 PRCPP42785 496 aa11.57□□□□□ -0.56
PTCHD1-201ENST00000379361 SEPT1Q8WYJ6 367 aa11.57□□□□□ -0.56
PTCHD1-201ENST00000379361 RERGLQ9H628 205 aa11.57□□□□□ -0.56
PTCHD1-201ENST00000379361 ENTPD4Q9Y227 616 aa11.57□□□□□ -0.56
PTCHD1-201ENST00000379361 PALLDQ8WX93 1383 aa11.57□□□□□ -0.56
PTCHD1-201ENST00000379361 PDE9AO76083 593 aa11.57□□□□□ -0.56
PTCHD1-201ENST00000379361 ZNF23P17027 643 aa11.57□□□□□ -0.56
PTCHD1-201ENST00000379361 COQ7Q99807 217 aa11.57□□□□□ -0.56
PTCHD1-201ENST00000379361 TSC22D2O75157 780 aa11.57□□□□□ -0.56
PTCHD1-201ENST00000379361 HPCAL1P37235 193 aa11.57□□□□□ -0.56
PTCHD1-201ENST00000379361 DSG1Q02413 1049 aa11.57□□□□□ -0.56
PTCHD1-201ENST00000379361 PTPN12Q05209 780 aaKnown RBP11.57□□□□□ -0.56
PTCHD1-201ENST00000379361 LPIN1Q14693 890 aa11.57□□□□□ -0.56
PTCHD1-201ENST00000379361 CASP12Q6UXS9 341 aa11.57□□□□□ -0.56
PTCHD1-201ENST00000379361 GUCY1B2O75343 617 aa11.57□□□□□ -0.56
PTCHD1-201ENST00000379361 ZNF248Q8NDW4 579 aa11.57□□□□□ -0.56
PTCHD1-201ENST00000379361 NPC1L1Q9UHC9 1359 aa11.57□□□□□ -0.56
PTCHD1-201ENST00000379361 CDH16O75309 829 aa11.57□□□□□ -0.56
PTCHD1-201ENST00000379361 ZBTB7AO95365 584 aa11.57□□□□□ -0.56
PTCHD1-201ENST00000379361 ZNF682O95780 498 aa11.57□□□□□ -0.56
PTCHD1-201ENST00000379361 CYP2A7P20853 494 aa11.57□□□□□ -0.56
PTCHD1-201ENST00000379361 HALP42357 657 aa11.57□□□□□ -0.56
PTCHD1-201ENST00000379361 C2CD6Q53TS8 623 aa11.57□□□□□ -0.56
PTCHD1-201ENST00000379361 KANSL3Q9P2N6 904 aa11.57□□□□□ -0.56
PTCHD1-201ENST00000379361 DNALI1O14645 258 aaPredicted RBP11.57□□□□□ -0.56
PTCHD1-201ENST00000379361 RPL10AP62906 217 aaKnown RBP11.57□□□□□ -0.56
PTCHD1-201ENST00000379361 SPON1Q9HCB6 807 aa11.57□□□□□ -0.56
PTCHD1-201ENST00000379361 ASAP1Q9ULH1 1129 aa11.57□□□□□ -0.56
PTCHD1-201ENST00000379361 PHF20L1A8MW92 1017 aa11.57□□□□□ -0.56
PTCHD1-201ENST00000379361 PMPCBO75439 489 aa11.57□□□□□ -0.56
PTCHD1-201ENST00000379361 FDFT1P37268 417 aa11.57□□□□□ -0.56
PTCHD1-201ENST00000379361 PARD6BQ9BYG5 372 aa11.57□□□□□ -0.56
PTCHD1-201ENST00000379361 OVOS2A0A0G2JMS6 1433 aa11.57□□□□□ -0.56
PTCHD1-201ENST00000379361 OVOS2A0A0J9YW53 1432 aa11.57□□□□□ -0.56
PTCHD1-201ENST00000379361 OVOS2Q6IE36 1432 aa11.57□□□□□ -0.56
PTCHD1-201ENST00000379361 FER1L5A0AVI2 2057 aa11.57□□□□□ -0.56
PTCHD1-201ENST00000379361 E2F4Q16254 413 aa11.57□□□□□ -0.56
PTCHD1-201ENST00000379361 SMU1Q2TAY7 513 aa11.57□□□□□ -0.56
PTCHD1-201ENST00000379361 FAM98BQ52LJ0 330 aaKnown RBP11.57□□□□□ -0.56
PTCHD1-201ENST00000379361 TAF8Q7Z7C8 310 aa11.57□□□□□ -0.56
PTCHD1-201ENST00000379361 ZNF668Q96K58 619 aaPredicted RBP11.57□□□□□ -0.56
PTCHD1-201ENST00000379361 BTBD9Q96Q07 612 aa11.57□□□□□ -0.56
PTCHD1-201ENST00000379361 USP18Q9UMW8 372 aa11.57□□□□□ -0.56
PTCHD1-201ENST00000379361 F5P12259 2224 aa11.57□□□□□ -0.56
PTCHD1-201ENST00000379361 METP08581 1390 aa11.57□□□□□ -0.56
PTCHD1-201ENST00000379361 RPL9P32969 192 aaKnown RBP11.57□□□□□ -0.56
PTCHD1-201ENST00000379361 ZNF655Q8N720 491 aaPredicted RBP11.57□□□□□ -0.56
PTCHD1-201ENST00000379361 MUTP22033 750 aa11.57□□□□□ -0.56
PTCHD1-201ENST00000379361 HPDLQ96IR7 371 aa11.57□□□□□ -0.56
PTCHD1-201ENST00000379361 LRRC4BQ9NT99 713 aa11.57□□□□□ -0.56
PTCHD1-201ENST00000379361 MDH1BQ5I0G3 518 aa11.57□□□□□ -0.56
PTCHD1-201ENST00000379361 TAF1DQ9H5J8 278 aaPredicted RBP11.57□□□□□ -0.56
PTCHD1-201ENST00000379361 KLHL1Q9NR64 748 aa11.57□□□□□ -0.56
PTCHD1-201ENST00000379361 SLC25A12O75746 678 aa11.56□□□□□ -0.56
PTCHD1-201ENST00000379361 STAT5AP42229 794 aa11.56□□□□□ -0.56
PTCHD1-201ENST00000379361 BCAP31P51572 246 aa11.56□□□□□ -0.56
PTCHD1-201ENST00000379361 CACNB3P54284 484 aa11.56□□□□□ -0.56
PTCHD1-201ENST00000379361 TRIM51Q9BSJ1 452 aa11.56□□□□□ -0.56
PTCHD1-201ENST00000379361 ELOVL6Q9H5J4 265 aa11.56□□□□□ -0.56
PTCHD1-201ENST00000379361 SNX4O95219 450 aa11.56□□□□□ -0.56
PTCHD1-201ENST00000379361 ACTN3Q08043 901 aaPredicted RBP11.56□□□□□ -0.56
PTCHD1-201ENST00000379361 PRMT1Q99873 361 aaKnown RBP11.56□□□□□ -0.56
PTCHD1-201ENST00000379361 PIK3R1P27986 724 aa11.56□□□□□ -0.56
PTCHD1-201ENST00000379361 TLX1P31314 330 aaPredicted RBP11.56□□□□□ -0.56
PTCHD1-201ENST00000379361 PSMD4P55036 377 aaKnown RBP11.56□□□□□ -0.56
PTCHD1-201ENST00000379361 MOV10L1Q9BXT6 1211 aaKnown RBP11.56□□□□□ -0.56
PTCHD1-201ENST00000379361 SEC31BQ9NQW1 1179 aa11.56□□□□□ -0.56
PTCHD1-201ENST00000379361 CES1P23141 567 aa11.56□□□□□ -0.56
PTCHD1-201ENST00000379361 FUT11Q495W5 492 aa11.56□□□□□ -0.56
PTCHD1-201ENST00000379361 LIN54Q6MZP7 749 aa11.56□□□□□ -0.56
PTCHD1-201ENST00000379361 CYP20A1Q6UW02 462 aa11.56□□□□□ -0.56
PTCHD1-201ENST00000379361 PPP1R10Q96QC0 940 aaKnown RBP11.56□□□□□ -0.56
PTCHD1-201ENST00000379361 CBX5P45973 191 aa11.56□□□□□ -0.56
PTCHD1-201ENST00000379361 MRPS35P82673 323 aaKnown RBP11.56□□□□□ -0.56
PTCHD1-201ENST00000379361 SMTNL2Q2TAL5 461 aa11.56□□□□□ -0.56
PTCHD1-201ENST00000379361 RANBP17Q9H2T7 1088 aaKnown RBP11.56□□□□□ -0.56
PTCHD1-201ENST00000379361 POLR1AO95602 1720 aaPredicted RBP11.56□□□□□ -0.56
PTCHD1-201ENST00000379361 CYP2C9P11712 490 aa11.56□□□□□ -0.56
PTCHD1-201ENST00000379361 EXOSC10Q01780 885 aaKnown RBP11.56□□□□□ -0.56
PTCHD1-201ENST00000379361 MYL12BO14950 172 aa11.56□□□□□ -0.56
PTCHD1-201ENST00000379361 SNPHO15079 494 aa11.56□□□□□ -0.56
PTCHD1-201ENST00000379361 USP17L6PQ6QN14 398 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms