RNA–Protein interactions for RNA: ENST00000379237.6

USP6NL-202, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP6NL, Length 4,546 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-202ENST00000379237 TEDDM1Q5T9Z0 273 aa11.33□□□□□ -0.6
USP6NL-202ENST00000379237 KYAT3Q6YP21 454 aaKnown RBP11.33□□□□□ -0.6
USP6NL-202ENST00000379237 GET4Q7L5D6 327 aaPredicted RBP11.33□□□□□ -0.6
USP6NL-202ENST00000379237 MARVELD2Q8N4S9 558 aa11.33□□□□□ -0.6
USP6NL-202ENST00000379237 TERB1Q8NA31 727 aa11.33□□□□□ -0.6
USP6NL-202ENST00000379237 KYQ8NBH2 561 aa11.33□□□□□ -0.6
USP6NL-202ENST00000379237 PDCD6IPQ8WUM4 868 aaKnown RBP11.33□□□□□ -0.6
USP6NL-202ENST00000379237 CDKL2Q92772 493 aa11.33□□□□□ -0.6
USP6NL-202ENST00000379237 SMYD2Q9NRG4 433 aa11.33□□□□□ -0.6
USP6NL-202ENST00000379237 LAMA4Q16363 1823 aa11.33□□□□□ -0.6
USP6NL-202ENST00000379237 A0A1W2PPW3 197 aa11.32□□□□□ -0.6
USP6NL-202ENST00000379237 DNAJA2O60884 412 aa11.32□□□□□ -0.6
USP6NL-202ENST00000379237 H6PDO95479 791 aa11.32□□□□□ -0.6
USP6NL-202ENST00000379237 DLDP09622 509 aaKnown RBP11.32□□□□□ -0.6
USP6NL-202ENST00000379237 CSE1LP55060 971 aaKnown RBP11.32□□□□□ -0.6
USP6NL-202ENST00000379237 MARSP56192 900 aaKnown RBP11.32□□□□□ -0.6
USP6NL-202ENST00000379237 FBXL19Q6PCT2 694 aa11.32□□□□□ -0.6
USP6NL-202ENST00000379237 TRAF7Q6Q0C0 670 aa11.32□□□□□ -0.6
USP6NL-202ENST00000379237 CDR2LQ86X02 465 aaPredicted RBP11.32□□□□□ -0.6
USP6NL-202ENST00000379237 MCF2L2Q86YR7 1114 aa11.32□□□□□ -0.6
USP6NL-202ENST00000379237 ZNF280CQ8ND82 737 aa11.32□□□□□ -0.6
USP6NL-202ENST00000379237 TRPC4APQ8TEL6 797 aa11.32□□□□□ -0.6
USP6NL-202ENST00000379237 BHMTQ93088 406 aa11.32□□□□□ -0.6
USP6NL-202ENST00000379237 PBXIP1Q96AQ6 731 aa11.32□□□□□ -0.6
USP6NL-202ENST00000379237 ORAI2Q96SN7 254 aa11.32□□□□□ -0.6
USP6NL-202ENST00000379237 EBF4Q9BQW3 602 aa11.32□□□□□ -0.6
USP6NL-202ENST00000379237 HMG20AQ9NP66 347 aa11.32□□□□□ -0.6
USP6NL-202ENST00000379237 THAP1Q9NVV9 213 aa11.32□□□□□ -0.6
USP6NL-202ENST00000379237 CRYBG1Q9Y4K1 1723 aa11.32□□□□□ -0.6
USP6NL-202ENST00000379237 USP17L5A8MUK1 530 aa11.32□□□□□ -0.6
USP6NL-202ENST00000379237 MYO1DO94832 1006 aa11.32□□□□□ -0.6
USP6NL-202ENST00000379237 GZMAP12544 262 aa11.32□□□□□ -0.6
USP6NL-202ENST00000379237 RAD23AP54725 363 aa11.32□□□□□ -0.6
USP6NL-202ENST00000379237 CYP2A13Q16696 494 aa11.32□□□□□ -0.6
USP6NL-202ENST00000379237 DCAF6Q58WW2 860 aa11.32□□□□□ -0.6
USP6NL-202ENST00000379237 GJC2Q5T442 439 aaPredicted RBP11.32□□□□□ -0.6
USP6NL-202ENST00000379237 ITPKCQ96DU7 683 aa11.32□□□□□ -0.6
USP6NL-202ENST00000379237 FRMD8Q9BZ67 464 aaPredicted RBP11.32□□□□□ -0.6
USP6NL-202ENST00000379237 ZNF395Q9H8N7 513 aaPredicted RBP11.32□□□□□ -0.6
USP6NL-202ENST00000379237 IGSF9Q9P2J2 1179 aa11.32□□□□□ -0.6
USP6NL-202ENST00000379237 ZC3H7BQ9UGR2 993 aaKnown RBP11.32□□□□□ -0.6
USP6NL-202ENST00000379237 PLA2G4CQ9UP65 541 aa11.32□□□□□ -0.6
USP6NL-202ENST00000379237 HEG1Q9ULI3 1381 aa11.32□□□□□ -0.6
USP6NL-202ENST00000379237 PIK3R2O00459 728 aa11.32□□□□□ -0.6
USP6NL-202ENST00000379237 ALAS1P13196 640 aa11.32□□□□□ -0.6
USP6NL-202ENST00000379237 CCNA2P20248 432 aa11.32□□□□□ -0.6
USP6NL-202ENST00000379237 KCNA4P22459 653 aa11.32□□□□□ -0.6
USP6NL-202ENST00000379237 GLRA2P23416 452 aa11.32□□□□□ -0.6
USP6NL-202ENST00000379237 RFC4P35249 363 aa11.32□□□□□ -0.6
USP6NL-202ENST00000379237 HADHQ16836 314 aaKnown RBP11.32□□□□□ -0.6
USP6NL-202ENST00000379237 PGS1Q32NB8 556 aa11.32□□□□□ -0.6
USP6NL-202ENST00000379237 RWDD4Q6NW29 188 aaKnown RBP11.32□□□□□ -0.6
USP6NL-202ENST00000379237 PIWIL2Q8TC59 973 aaKnown RBP11.32□□□□□ -0.6
USP6NL-202ENST00000379237 SCYL1Q96KG9 808 aa11.32□□□□□ -0.6
USP6NL-202ENST00000379237 VTA1Q9NP79 307 aa11.32□□□□□ -0.6
USP6NL-202ENST00000379237 SACM1LQ9NTJ5 587 aa11.32□□□□□ -0.6
USP6NL-202ENST00000379237 DSEQ9UL01 958 aa11.32□□□□□ -0.6
USP6NL-202ENST00000379237 SORCS3Q9UPU3 1222 aa11.32□□□□□ -0.6
USP6NL-202ENST00000379237 SHOC2Q9UQ13 582 aa11.32□□□□□ -0.6
USP6NL-202ENST00000379237 SNX5Q9Y5X3 404 aa11.32□□□□□ -0.6
USP6NL-202ENST00000379237 IDH3BO43837 385 aa11.32□□□□□ -0.6
USP6NL-202ENST00000379237 CSF1RP07333 972 aa11.32□□□□□ -0.6
USP6NL-202ENST00000379237 TNNI1P19237 187 aa11.32□□□□□ -0.6
USP6NL-202ENST00000379237 TUBA4AP68366 448 aa11.32□□□□□ -0.6
USP6NL-202ENST00000379237 DCDC5Q6ZRR9 648 aa11.32□□□□□ -0.6
USP6NL-202ENST00000379237 ZNF804AQ7Z570 1209 aa11.32□□□□□ -0.6
USP6NL-202ENST00000379237 TTC30AQ86WT1 665 aa11.32□□□□□ -0.6
USP6NL-202ENST00000379237 SNX32Q86XE0 403 aa11.32□□□□□ -0.6
USP6NL-202ENST00000379237 IMPG2Q9BZV3 1241 aa11.32□□□□□ -0.6
USP6NL-202ENST00000379237 EIF3FO00303 357 aaPredicted RBP11.31□□□□□ -0.6
USP6NL-202ENST00000379237 GAS7O60861 476 aa11.31□□□□□ -0.6
USP6NL-202ENST00000379237 ME2P23368 584 aa11.31□□□□□ -0.6
USP6NL-202ENST00000379237 HIBADHP31937 336 aaKnown RBP11.31□□□□□ -0.6
USP6NL-202ENST00000379237 MSLNQ13421 630 aaPredicted RBP11.31□□□□□ -0.6
USP6NL-202ENST00000379237 FASTKD1Q53R41 847 aaKnown RBP11.31□□□□□ -0.6
USP6NL-202ENST00000379237 PPM1LQ5SGD2 360 aa11.31□□□□□ -0.6
USP6NL-202ENST00000379237 DNAJC24Q6P3W2 148 aa11.31□□□□□ -0.6
USP6NL-202ENST00000379237 DPH6Q7L8W6 267 aa11.31□□□□□ -0.6
USP6NL-202ENST00000379237 ADGRG6Q86SQ4 1221 aa11.31□□□□□ -0.6
USP6NL-202ENST00000379237 NLRX1Q86UT6 975 aa11.31□□□□□ -0.6
USP6NL-202ENST00000379237 TDRPQ86YL5 185 aa11.31□□□□□ -0.6
USP6NL-202ENST00000379237 METTL25Q8N6Q8 603 aa11.31□□□□□ -0.6
USP6NL-202ENST00000379237 TNIP2Q8NFZ5 429 aa11.31□□□□□ -0.6
USP6NL-202ENST00000379237 TBX22Q9Y458 520 aa11.31□□□□□ -0.6
USP6NL-202ENST00000379237 NEO1Q92859 1461 aa11.31□□□□□ -0.6
USP6NL-202ENST00000379237 SYCE1LA8MT33 242 aa11.31□□□□□ -0.6
USP6NL-202ENST00000379237 CYB561D2O14569 222 aa11.31□□□□□ -0.6
USP6NL-202ENST00000379237 IST1P53990 364 aa11.31□□□□□ -0.6
USP6NL-202ENST00000379237 HNRNPDQ14103 355 aaKnown RBP11.31□□□□□ -0.6
USP6NL-202ENST00000379237 PRPSAP1Q14558 356 aa11.31□□□□□ -0.6
USP6NL-202ENST00000379237 COG2Q14746 738 aa11.31□□□□□ -0.6
USP6NL-202ENST00000379237 TMEM132AQ24JP5 1023 aa11.31□□□□□ -0.6
USP6NL-202ENST00000379237 TMEM119Q4V9L6 283 aa11.31□□□□□ -0.6
USP6NL-202ENST00000379237 SCARA3Q6AZY7 606 aa11.31□□□□□ -0.6
USP6NL-202ENST00000379237 SLC26A11Q86WA9 606 aa11.31□□□□□ -0.6
USP6NL-202ENST00000379237 PSPC1Q8WXF1 523 aaKnown RBP11.31□□□□□ -0.6
USP6NL-202ENST00000379237 MAN1C1Q9NR34 630 aa11.31□□□□□ -0.6
USP6NL-202ENST00000379237 PCDHA1Q9Y5I3 950 aa11.31□□□□□ -0.6
USP6NL-202ENST00000379237 KANSL1LA0AUZ9 987 aa11.31□□□□□ -0.6
USP6NL-202ENST00000379237 ALOX15BO15296 676 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms