RNA–Protein interactions for RNA: ENST00000378362.3

GFRA3-202, Transcript of GDNF family receptor alpha 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GFRA3, Length 1,837 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3-202ENST00000378362 ARNTLO00327 626 aa23.06■■□□□ 1.28
GFRA3-202ENST00000378362 TLR5O60602 858 aa23.06■■□□□ 1.28
GFRA3-202ENST00000378362 POLR2FP61218 127 aaKnown RBP23.06■■□□□ 1.28
GFRA3-202ENST00000378362 RAB41Q5JT25 222 aa23.06■■□□□ 1.28
GFRA3-202ENST00000378362 PDZD8Q8NEN9 1154 aa23.06■■□□□ 1.28
GFRA3-202ENST00000378362 CLEC4CQ8WTT0 213 aa23.06■■□□□ 1.28
GFRA3-202ENST00000378362 SLC35F5Q8WV83 523 aa23.06■■□□□ 1.28
GFRA3-202ENST00000378362 NAP1L5Q96NT1 182 aaPredicted RBP23.06■■□□□ 1.28
GFRA3-202ENST00000378362 GANQ9H2C0 597 aa23.06■■□□□ 1.28
GFRA3-202ENST00000378362 LRRC4Q9HBW1 653 aa23.06■■□□□ 1.28
GFRA3-202ENST00000378362 PNPLA8Q9NP80 782 aa23.06■■□□□ 1.28
GFRA3-202ENST00000378362 TLR8Q9NR97 1041 aaKnown RBP23.06■■□□□ 1.28
GFRA3-202ENST00000378362 MTF2Q9Y483 593 aaPredicted RBP23.06■■□□□ 1.28
GFRA3-202ENST00000378362 LRRC10BA6NIK2 292 aa23.05■■□□□ 1.28
GFRA3-202ENST00000378362 LEFTY2O00292 366 aa23.05■■□□□ 1.28
GFRA3-202ENST00000378362 IRF1P10914 325 aa23.05■■□□□ 1.28
GFRA3-202ENST00000378362 ARSAP15289 507 aa23.05■■□□□ 1.28
GFRA3-202ENST00000378362 PPP3CCP48454 512 aa23.05■■□□□ 1.28
GFRA3-202ENST00000378362 IRF7Q92985 503 aa23.05■■□□□ 1.28
GFRA3-202ENST00000378362 E2F7Q96AV8 911 aa23.05■■□□□ 1.28
GFRA3-202ENST00000378362 NACA2Q9H009 215 aa23.05■■□□□ 1.28
GFRA3-202ENST00000378362 TBC1D17Q9HA65 648 aa23.05■■□□□ 1.28
GFRA3-202ENST00000378362 ST7Q9NRC1 585 aa23.05■■□□□ 1.28
GFRA3-202ENST00000378362 RARGP13631 454 aa23.05■■□□□ 1.28
GFRA3-202ENST00000378362 WEE1P30291 646 aa23.05■■□□□ 1.28
GFRA3-202ENST00000378362 PLA2G4AP47712 749 aa23.05■■□□□ 1.28
GFRA3-202ENST00000378362 ZNF77Q15935 545 aa23.05■■□□□ 1.28
GFRA3-202ENST00000378362 TPRG1Q6ZUI0 275 aa23.05■■□□□ 1.28
GFRA3-202ENST00000378362 OVCA2Q8WZ82 227 aa23.05■■□□□ 1.28
GFRA3-202ENST00000378362 MIS12Q9H081 205 aa23.05■■□□□ 1.28
GFRA3-202ENST00000378362 TJP2Q9UDY2 1190 aa23.05■■□□□ 1.28
GFRA3-202ENST00000378362 HELZP42694 1942 aaKnown RBP23.04■■□□□ 1.28
GFRA3-202ENST00000378362 CACNA1IQ9P0X4 2223 aa23.04■■□□□ 1.28
GFRA3-202ENST00000378362 CHADO15335 359 aa23.04■■□□□ 1.28
GFRA3-202ENST00000378362 GPD2P43304 727 aa23.04■■□□□ 1.28
GFRA3-202ENST00000378362 MTF1Q14872 753 aa23.04■■□□□ 1.28
GFRA3-202ENST00000378362 MLF2Q15773 248 aaPredicted RBP23.04■■□□□ 1.28
GFRA3-202ENST00000378362 CWF19L1Q69YN2 538 aaKnown RBP23.04■■□□□ 1.28
GFRA3-202ENST00000378362 FAM71AQ8IYT1 594 aa23.04■■□□□ 1.28
GFRA3-202ENST00000378362 ZFRQ96KR1 1074 aaKnown RBP23.04■■□□□ 1.28
GFRA3-202ENST00000378362 COMMD8Q9NX08 183 aa23.04■■□□□ 1.28
GFRA3-202ENST00000378362 CFAP97Q9P2B7 532 aa23.04■■□□□ 1.28
GFRA3-202ENST00000378362 ARHGAP26Q9UNA1 814 aa23.04■■□□□ 1.28
GFRA3-202ENST00000378362 SHISA7A6NL88 538 aa23.03■■□□□ 1.28
GFRA3-202ENST00000378362 OLFM2O95897 454 aa23.03■■□□□ 1.28
GFRA3-202ENST00000378362 ZBED1O96006 694 aa23.03■■□□□ 1.28
GFRA3-202ENST00000378362 SETSIPP0DME0 302 aa23.03■■□□□ 1.28
GFRA3-202ENST00000378362 PFKPQ01813 784 aa23.03■■□□□ 1.28
GFRA3-202ENST00000378362 TAF3Q5VWG9 929 aa23.03■■□□□ 1.28
GFRA3-202ENST00000378362 SNX30Q5VWJ9 437 aa23.03■■□□□ 1.28
GFRA3-202ENST00000378362 BHLHA9Q7RTU4 235 aa23.03■■□□□ 1.28
GFRA3-202ENST00000378362 CCDC186Q7Z3E2 898 aa23.03■■□□□ 1.28
GFRA3-202ENST00000378362 FBXL6Q8N531 539 aa23.03■■□□□ 1.28
GFRA3-202ENST00000378362 EDEM1Q92611 657 aa23.03■■□□□ 1.28
GFRA3-202ENST00000378362 UBXN6Q9BZV1 441 aa23.03■■□□□ 1.28
GFRA3-202ENST00000378362 HPS4Q9NQG7 708 aa23.03■■□□□ 1.28
GFRA3-202ENST00000378362 MTPAPQ9NVV4 582 aaKnown RBP eCLIP23.03■■□□□ 1.28
GFRA3-202ENST00000378362 OBP2AQ9NY56 170 aa23.03■■□□□ 1.28
GFRA3-202ENST00000378362 ZMYM5Q9UJ78 669 aa23.03■■□□□ 1.28
GFRA3-202ENST00000378362 YJEFN3A6XGL0 299 aa23.03■■□□□ 1.28
GFRA3-202ENST00000378362 E7ENQ6 273 aa23.03■■□□□ 1.28
GFRA3-202ENST00000378362 RFX1P22670 979 aa23.03■■□□□ 1.28
GFRA3-202ENST00000378362 SLC7A9P82251 487 aa23.03■■□□□ 1.28
GFRA3-202ENST00000378362 C10orf120Q5SQS8 335 aa23.03■■□□□ 1.28
GFRA3-202ENST00000378362 NAIF1Q69YI7 327 aaPredicted RBP23.03■■□□□ 1.28
GFRA3-202ENST00000378362 CC2D1AQ6P1N0 951 aaPredicted RBP23.03■■□□□ 1.28
GFRA3-202ENST00000378362 MIB1Q86YT6 1006 aa23.03■■□□□ 1.28
GFRA3-202ENST00000378362 SCUBE3Q8IX30 993 aa23.03■■□□□ 1.28
GFRA3-202ENST00000378362 FAM81BQ96LP2 452 aa23.03■■□□□ 1.28
GFRA3-202ENST00000378362 FAM83CQ9BQN1 747 aa23.03■■□□□ 1.28
GFRA3-202ENST00000378362 PIAS3Q9Y6X2 628 aa23.03■■□□□ 1.28
GFRA3-202ENST00000378362 F8VZ95 297 aa23.02■■□□□ 1.28
GFRA3-202ENST00000378362 GFPT2O94808 682 aa23.02■■□□□ 1.28
GFRA3-202ENST00000378362 DCNP07585 359 aaKnown RBP23.02■■□□□ 1.28
GFRA3-202ENST00000378362 PTK2Q05397 1052 aa23.02■■□□□ 1.28
GFRA3-202ENST00000378362 ZNF268Q14587 947 aaPredicted RBP23.02■■□□□ 1.28
GFRA3-202ENST00000378362 ARHGAP29Q52LW3 1261 aa23.02■■□□□ 1.28
GFRA3-202ENST00000378362 SIX6OS1Q8N1H7 587 aa23.02■■□□□ 1.28
GFRA3-202ENST00000378362 WDTC1Q8N5D0 677 aa23.02■■□□□ 1.28
GFRA3-202ENST00000378362 TMEM105Q8N8V8 129 aa23.02■■□□□ 1.28
GFRA3-202ENST00000378362 STK33Q9BYT3 514 aa23.02■■□□□ 1.28
GFRA3-202ENST00000378362 RTN4Q9NQC3 1192 aaKnown RBP23.02■■□□□ 1.28
GFRA3-202ENST00000378362 THG1LQ9NWX6 298 aaKnown RBP23.02■■□□□ 1.28
GFRA3-202ENST00000378362 DUS2Q9NX74 493 aaKnown RBP23.02■■□□□ 1.28
GFRA3-202ENST00000378362 SOBPA7XYQ1 873 aa23.01■■□□□ 1.27
GFRA3-202ENST00000378362 KPNA1P52294 538 aaPredicted RBP23.01■■□□□ 1.27
GFRA3-202ENST00000378362 YWHAGP61981 247 aaKnown RBP eCLIP23.01■■□□□ 1.27
GFRA3-202ENST00000378362 USP4Q13107 963 aa23.01■■□□□ 1.27
GFRA3-202ENST00000378362 UBXN2BQ14CS0 331 aa23.01■■□□□ 1.27
GFRA3-202ENST00000378362 TXNDC11Q6PKC3 985 aa23.01■■□□□ 1.27
GFRA3-202ENST00000378362 SUGP1Q8IWZ8 645 aaKnown RBP23.01■■□□□ 1.27
GFRA3-202ENST00000378362 CSGALNACT1Q8TDX6 532 aa23.01■■□□□ 1.27
GFRA3-202ENST00000378362 NDRG2Q9UN36 371 aaKnown RBP23.01■■□□□ 1.27
GFRA3-202ENST00000378362 HMBSP08397 361 aa23.01■■□□□ 1.27
GFRA3-202ENST00000378362 EFEMP1Q12805 493 aa23.01■■□□□ 1.27
GFRA3-202ENST00000378362 STILQ15468 1287 aa23.01■■□□□ 1.27
GFRA3-202ENST00000378362 PM20D1Q6GTS8 502 aa23.01■■□□□ 1.27
GFRA3-202ENST00000378362 BMP8AQ7Z5Y6 402 aa23.01■■□□□ 1.27
GFRA3-202ENST00000378362 RNF214Q8ND24 703 aa23.01■■□□□ 1.27
GFRA3-202ENST00000378362 NEK11Q8NG66 645 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms