RNA–Protein interactions for RNA: ENST00000378308.6

USP9X-202, Transcript of ubiquitin specific peptidase 9 X-linked, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP9X, Length 8,371 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP9X-202ENST00000378308 TRIT1Q9H3H1 467 aaKnown RBP13.75□□□□□ -0.21
USP9X-202ENST00000378308 ZNRF3Q9ULT6 936 aa13.75□□□□□ -0.21
USP9X-202ENST00000378308 SH3GLB1Q9Y371 365 aa13.75□□□□□ -0.21
USP9X-202ENST00000378308 PTPRTO14522 1441 aa13.75□□□□□ -0.21
USP9X-202ENST00000378308 TTC26A0AVF1 554 aa13.75□□□□□ -0.21
USP9X-202ENST00000378308 KATNA1O75449 491 aa13.75□□□□□ -0.21
USP9X-202ENST00000378308 TAF6P49848 677 aa13.75□□□□□ -0.21
USP9X-202ENST00000378308 ATP6AP1LQ52LC2 224 aa13.75□□□□□ -0.21
USP9X-202ENST00000378308 PEG10Q86TG7 708 aaKnown RBP13.75□□□□□ -0.21
USP9X-202ENST00000378308 BBS4Q96RK4 519 aa13.75□□□□□ -0.21
USP9X-202ENST00000378308 PRKD2Q9BZL6 878 aa13.75□□□□□ -0.21
USP9X-202ENST00000378308 IL1RAPL1Q9NZN1 696 aa13.75□□□□□ -0.21
USP9X-202ENST00000378308 HPS5Q9UPZ3 1129 aa13.75□□□□□ -0.21
USP9X-202ENST00000378308 AAR2Q9Y312 384 aaKnown RBP13.75□□□□□ -0.21
USP9X-202ENST00000378308 EXTL3O43909 919 aa13.74□□□□□ -0.21
USP9X-202ENST00000378308 PRMT3O60678 531 aa13.74□□□□□ -0.21
USP9X-202ENST00000378308 FNDC3BQ53EP0 1204 aaKnown RBP13.74□□□□□ -0.21
USP9X-202ENST00000378308 SERPINB12Q96P63 405 aa13.74□□□□□ -0.21
USP9X-202ENST00000378308 SHANK2Q9UPX8 1470 aa13.74□□□□□ -0.21
USP9X-202ENST00000378308 CENPXA8MT69 81 aa13.74□□□□□ -0.21
USP9X-202ENST00000378308 KIAA0391O15091 583 aaKnown RBP13.74□□□□□ -0.21
USP9X-202ENST00000378308 MSH4O15457 936 aa13.74□□□□□ -0.21
USP9X-202ENST00000378308 CPA2P48052 419 aa13.74□□□□□ -0.21
USP9X-202ENST00000378308 BIKQ13323 160 aa13.74□□□□□ -0.21
USP9X-202ENST00000378308 SKIV2L2P42285 1042 aaKnown RBP13.74□□□□□ -0.21
USP9X-202ENST00000378308 CCT8P50990 548 aa13.74□□□□□ -0.21
USP9X-202ENST00000378308 KRR1Q13601 381 aaKnown RBP13.74□□□□□ -0.21
USP9X-202ENST00000378308 ARMC4Q5T2S8 1044 aa13.74□□□□□ -0.21
USP9X-202ENST00000378308 DOK6Q6PKX4 331 aa13.74□□□□□ -0.21
USP9X-202ENST00000378308 NT5DC3Q86UY8 548 aa13.74□□□□□ -0.21
USP9X-202ENST00000378308 PAICSP22234 425 aaKnown RBP13.74□□□□□ -0.21
USP9X-202ENST00000378308 PNPLA4P41247 253 aa13.74□□□□□ -0.21
USP9X-202ENST00000378308 CTCFP49711 727 aaPredicted RBP13.74□□□□□ -0.21
USP9X-202ENST00000378308 CHRNB3Q05901 458 aa13.74□□□□□ -0.21
USP9X-202ENST00000378308 PACS1Q6VY07 963 aa13.74□□□□□ -0.21
USP9X-202ENST00000378308 GPR141Q7Z602 305 aa13.74□□□□□ -0.21
USP9X-202ENST00000378308 ITIH5Q86UX2 942 aa13.74□□□□□ -0.21
USP9X-202ENST00000378308 SLC9A7Q96T83 725 aa13.74□□□□□ -0.21
USP9X-202ENST00000378308 USP15Q9Y4E8 981 aaPredicted RBP13.74□□□□□ -0.21
USP9X-202ENST00000378308 NPHP4O75161 1426 aaPredicted RBP13.74□□□□□ -0.21
USP9X-202ENST00000378308 PVALEFA0A1B0GWK0 134 aa13.74□□□□□ -0.21
USP9X-202ENST00000378308 SNPHO15079 494 aa13.74□□□□□ -0.21
USP9X-202ENST00000378308 OR6B1O95007 311 aa13.74□□□□□ -0.21
USP9X-202ENST00000378308 LTKP29376 864 aa13.74□□□□□ -0.21
USP9X-202ENST00000378308 COPAP53621 1224 aa13.74□□□□□ -0.21
USP9X-202ENST00000378308 DSG1Q02413 1049 aa13.74□□□□□ -0.21
USP9X-202ENST00000378308 DSG4Q86SJ6 1040 aa13.74□□□□□ -0.21
USP9X-202ENST00000378308 C1QTNF7Q9BXJ2 289 aa13.74□□□□□ -0.21
USP9X-202ENST00000378308 SLITRK2Q9H156 845 aa13.74□□□□□ -0.21
USP9X-202ENST00000378308 CLEC4MQ9H2X3 399 aaPredicted RBP13.74□□□□□ -0.21
USP9X-202ENST00000378308 RPS6KL1Q9Y6S9 549 aa13.74□□□□□ -0.21
USP9X-202ENST00000378308 CRTAMO95727 393 aa13.74□□□□□ -0.21
USP9X-202ENST00000378308 SCAIQ8N9R8 606 aa13.74□□□□□ -0.21
USP9X-202ENST00000378308 RDM1Q8NG50 284 aa13.74□□□□□ -0.21
USP9X-202ENST00000378308 CDH16O75309 829 aa13.74□□□□□ -0.21
USP9X-202ENST00000378308 LARGE1O95461 756 aa13.74□□□□□ -0.21
USP9X-202ENST00000378308 VAV1P15498 845 aa13.74□□□□□ -0.21
USP9X-202ENST00000378308 CCNIQ14094 377 aa13.74□□□□□ -0.21
USP9X-202ENST00000378308 CYP4X1Q8N118 509 aa13.74□□□□□ -0.21
USP9X-202ENST00000378308 CCDC185Q8N715 623 aa13.74□□□□□ -0.21
USP9X-202ENST00000378308 CELF1Q92879 486 aaKnown RBP13.74□□□□□ -0.21
USP9X-202ENST00000378308 C9orf72Q96LT7 481 aa13.74□□□□□ -0.21
USP9X-202ENST00000378308 COQ7Q99807 217 aa13.74□□□□□ -0.21
USP9X-202ENST00000378308 KLHL28Q9NXS3 571 aa13.74□□□□□ -0.21
USP9X-202ENST00000378308 PABPC1P11940 636 aaKnown RBP13.73□□□□□ -0.21
USP9X-202ENST00000378308 RFC5P40937 340 aa13.73□□□□□ -0.21
USP9X-202ENST00000378308 IL2P60568 153 aa13.73□□□□□ -0.21
USP9X-202ENST00000378308 ESRP1Q6NXG1 681 aaKnown RBP13.73□□□□□ -0.21
USP9X-202ENST00000378308 SETD3Q86TU7 594 aaPredicted RBP13.73□□□□□ -0.21
USP9X-202ENST00000378308 SEPT1Q8WYJ6 367 aa13.73□□□□□ -0.21
USP9X-202ENST00000378308 ZNF624Q9P2J8 865 aaPredicted RBP13.73□□□□□ -0.21
USP9X-202ENST00000378308 H3BN98 237 aa13.73□□□□□ -0.21
USP9X-202ENST00000378308 CD2BP2O95400 341 aaKnown RBP13.73□□□□□ -0.21
USP9X-202ENST00000378308 ALG11Q2TAA5 492 aa13.73□□□□□ -0.21
USP9X-202ENST00000378308 DNALI1O14645 258 aaPredicted RBP13.73□□□□□ -0.21
USP9X-202ENST00000378308 VTNP04004 478 aa13.73□□□□□ -0.21
USP9X-202ENST00000378308 ITGA3P26006 1051 aa13.73□□□□□ -0.21
USP9X-202ENST00000378308 RHAGQ02094 409 aa13.73□□□□□ -0.21
USP9X-202ENST00000378308 ELOVL6Q9H5J4 265 aa13.73□□□□□ -0.21
USP9X-202ENST00000378308 NT5MQ9NPB1 228 aa13.73□□□□□ -0.21
USP9X-202ENST00000378308 PRMT7Q9NVM4 692 aaPredicted RBP13.73□□□□□ -0.21
USP9X-202ENST00000378308 TCOF1Q13428 1488 aaKnown RBP13.73□□□□□ -0.21
USP9X-202ENST00000378308 CST8O60676 142 aa13.73□□□□□ -0.21
USP9X-202ENST00000378308 MTA2O94776 668 aa13.73□□□□□ -0.21
USP9X-202ENST00000378308 MYL12AP19105 171 aa13.73□□□□□ -0.21
USP9X-202ENST00000378308 GRIK3Q13003 919 aa13.73□□□□□ -0.21
USP9X-202ENST00000378308 EPHA7Q15375 998 aa13.73□□□□□ -0.21
USP9X-202ENST00000378308 TSNQ15631 228 aaKnown RBP13.73□□□□□ -0.21
USP9X-202ENST00000378308 CTXN3Q4LDR2 81 aa13.73□□□□□ -0.21
USP9X-202ENST00000378308 ZC2HC1CQ53FD0 456 aaPredicted RBP13.73□□□□□ -0.21
USP9X-202ENST00000378308 VPS33BQ9H267 617 aa13.73□□□□□ -0.21
USP9X-202ENST00000378308 SLC16A3O15427 465 aaKnown RBP13.73□□□□□ -0.21
USP9X-202ENST00000378308 HS6ST1O60243 411 aa13.73□□□□□ -0.21
USP9X-202ENST00000378308 IFNA14P01570 189 aa13.73□□□□□ -0.21
USP9X-202ENST00000378308 OXCT1P55809 520 aa13.73□□□□□ -0.21
USP9X-202ENST00000378308 CRYMQ14894 314 aa13.73□□□□□ -0.21
USP9X-202ENST00000378308 SPATA4Q8NEY3 305 aa13.73□□□□□ -0.21
USP9X-202ENST00000378308 ERP27Q96DN0 273 aa13.73□□□□□ -0.21
USP9X-202ENST00000378308 KLF6Q99612 283 aaPredicted RBP13.73□□□□□ -0.21
USP9X-202ENST00000378308 KCTD14Q9BQ13 255 aaPredicted RBP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms