RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 TTC7BQ86TV6 843 aa12.18□□□□□ -0.46
NPHP4-202ENST00000378161 LILRB1Q8NHL6 650 aaPredicted RBP12.18□□□□□ -0.46
NPHP4-202ENST00000378161 SLC35C2Q9NQQ7 365 aa12.18□□□□□ -0.46
NPHP4-202ENST00000378161 SACM1LQ9NTJ5 587 aa12.18□□□□□ -0.46
NPHP4-202ENST00000378161 NEU2Q9Y3R4 380 aa12.18□□□□□ -0.46
NPHP4-202ENST00000378161 H0YGN5 161 aa12.17□□□□□ -0.46
NPHP4-202ENST00000378161 PEX1O43933 1283 aa12.17□□□□□ -0.46
NPHP4-202ENST00000378161 PRDX5P30044 214 aa12.17□□□□□ -0.46
NPHP4-202ENST00000378161 CENPAP49450 140 aa12.17□□□□□ -0.46
NPHP4-202ENST00000378161 MAPK10P53779 464 aa12.17□□□□□ -0.46
NPHP4-202ENST00000378161 SF3B4Q15427 424 aaKnown RBP eCLIP12.17□□□□□ -0.46
NPHP4-202ENST00000378161 MAPRE1Q15691 268 aaKnown RBP12.17□□□□□ -0.46
NPHP4-202ENST00000378161 PRR23BQ6ZRT6 265 aa12.17□□□□□ -0.46
NPHP4-202ENST00000378161 PDSS2Q86YH6 399 aa12.17□□□□□ -0.46
NPHP4-202ENST00000378161 POC5Q8NA72 575 aa12.17□□□□□ -0.46
NPHP4-202ENST00000378161 FAR2Q96K12 515 aa12.17□□□□□ -0.46
NPHP4-202ENST00000378161 CTRCQ99895 268 aa12.17□□□□□ -0.46
NPHP4-202ENST00000378161 MXD3Q9BW11 206 aa12.17□□□□□ -0.46
NPHP4-202ENST00000378161 AMNQ9BXJ7 453 aa12.17□□□□□ -0.46
NPHP4-202ENST00000378161 SAYSD1Q9NPB0 183 aa12.17□□□□□ -0.46
NPHP4-202ENST00000378161 SLCO1B3Q9NPD5 702 aa12.17□□□□□ -0.46
NPHP4-202ENST00000378161 DDX43Q9NXZ2 648 aaKnown RBP12.17□□□□□ -0.46
NPHP4-202ENST00000378161 ARMCX1Q9P291 453 aa12.17□□□□□ -0.46
NPHP4-202ENST00000378161 NFS1Q9Y697 457 aa12.17□□□□□ -0.46
NPHP4-202ENST00000378161 ADAM23O75077 832 aa12.17□□□□□ -0.46
NPHP4-202ENST00000378161 CYP1A2P05177 515 aa12.17□□□□□ -0.46
NPHP4-202ENST00000378161 INHBAP08476 426 aa12.17□□□□□ -0.46
NPHP4-202ENST00000378161 ITGA4P13612 1032 aa12.17□□□□□ -0.46
NPHP4-202ENST00000378161 RCVRNP35243 200 aa12.17□□□□□ -0.46
NPHP4-202ENST00000378161 ACADSBP45954 432 aa12.17□□□□□ -0.46
NPHP4-202ENST00000378161 TOB1P50616 345 aaPredicted RBP12.17□□□□□ -0.46
NPHP4-202ENST00000378161 AP3M2P53677 418 aa12.17□□□□□ -0.46
NPHP4-202ENST00000378161 TNFAIP2Q03169 654 aa12.17□□□□□ -0.46
NPHP4-202ENST00000378161 C6orf10Q5SRN2 563 aa12.17□□□□□ -0.46
NPHP4-202ENST00000378161 NT5DC1Q5TFE4 455 aa12.17□□□□□ -0.46
NPHP4-202ENST00000378161 WDR59Q6PJI9 974 aa12.17□□□□□ -0.46
NPHP4-202ENST00000378161 LSMEM1Q8N8F7 131 aa12.17□□□□□ -0.46
NPHP4-202ENST00000378161 DCUN1D1Q96GG9 259 aa12.17□□□□□ -0.46
NPHP4-202ENST00000378161 TRIM15Q9C019 465 aa12.17□□□□□ -0.46
NPHP4-202ENST00000378161 CDC42EP4Q9H3Q1 356 aaKnown RBP12.17□□□□□ -0.46
NPHP4-202ENST00000378161 CCDC59Q9P031 241 aaKnown RBP12.17□□□□□ -0.46
NPHP4-202ENST00000378161 GCNT4Q9P109 453 aa12.17□□□□□ -0.46
NPHP4-202ENST00000378161 ARHGAP20Q9P2F6 1191 aa12.17□□□□□ -0.46
NPHP4-202ENST00000378161 PCDHB2Q9Y5E7 798 aa12.17□□□□□ -0.46
NPHP4-202ENST00000378161 CDK8P49336 464 aa12.17□□□□□ -0.46
NPHP4-202ENST00000378161 CACNB1Q02641 598 aaPredicted RBP12.17□□□□□ -0.46
NPHP4-202ENST00000378161 VAC14Q08AM6 782 aa12.17□□□□□ -0.46
NPHP4-202ENST00000378161 PTK7Q13308 1070 aa12.17□□□□□ -0.46
NPHP4-202ENST00000378161 BFSP2Q13515 415 aa12.17□□□□□ -0.46
NPHP4-202ENST00000378161 CYP2A13Q16696 494 aa12.17□□□□□ -0.46
NPHP4-202ENST00000378161 ALFQ53S48 1182 aa12.17□□□□□ -0.46
NPHP4-202ENST00000378161 SPOPLQ6IQ16 392 aa12.17□□□□□ -0.46
NPHP4-202ENST00000378161 RAPH1Q70E73 1250 aa12.17□□□□□ -0.46
NPHP4-202ENST00000378161 PI4KBQ9UBF8 816 aa12.17□□□□□ -0.46
NPHP4-202ENST00000378161 TIMM22Q9Y584 194 aa12.17□□□□□ -0.46
NPHP4-202ENST00000378161 STON1Q9Y6Q2 735 aa12.17□□□□□ -0.46
NPHP4-202ENST00000378161 WBP4O75554 376 aaKnown RBP12.16□□□□□ -0.46
NPHP4-202ENST00000378161 TTC4O95801 387 aa12.16□□□□□ -0.46
NPHP4-202ENST00000378161 IFNA14P01570 189 aa12.16□□□□□ -0.46
NPHP4-202ENST00000378161 EIF2AK2P19525 551 aaKnown RBP12.16□□□□□ -0.46
NPHP4-202ENST00000378161 RECQLP46063 649 aaPredicted RBP12.16□□□□□ -0.46
NPHP4-202ENST00000378161 KLK7P49862 253 aa12.16□□□□□ -0.46
NPHP4-202ENST00000378161 SPDYAQ5MJ70 313 aa12.16□□□□□ -0.46
NPHP4-202ENST00000378161 SLFN13Q68D06 897 aa12.16□□□□□ -0.46
NPHP4-202ENST00000378161 SLC7A3Q8WY07 619 aa12.16□□□□□ -0.46
NPHP4-202ENST00000378161 CMTM5Q96DZ9 223 aa12.16□□□□□ -0.46
NPHP4-202ENST00000378161 FBXO28Q9NVF7 368 aa12.16□□□□□ -0.46
NPHP4-202ENST00000378161 DNAJC12Q9UKB3 198 aa12.16□□□□□ -0.46
NPHP4-202ENST00000378161 MINPP1Q9UNW1 487 aa12.16□□□□□ -0.46
NPHP4-202ENST00000378161 STXBP5LQ9Y2K9 1186 aa12.16□□□□□ -0.46
NPHP4-202ENST00000378161 TRPC5OSA6NMA1 111 aa12.16□□□□□ -0.46
NPHP4-202ENST00000378161 RNF225M0QZC1 329 aaPredicted RBP12.16□□□□□ -0.46
NPHP4-202ENST00000378161 RGS5O15539 181 aa12.16□□□□□ -0.46
NPHP4-202ENST00000378161 PJA2O43164 708 aa12.16□□□□□ -0.46
NPHP4-202ENST00000378161 EDF1O60869 148 aaKnown RBP12.16□□□□□ -0.46
NPHP4-202ENST00000378161 GTF2H1P32780 548 aa12.16□□□□□ -0.46
NPHP4-202ENST00000378161 BNC1Q01954 994 aa12.16□□□□□ -0.46
NPHP4-202ENST00000378161 FIGNQ5HY92 759 aa12.16□□□□□ -0.46
NPHP4-202ENST00000378161 HMBOX1Q6NT76 420 aa12.16□□□□□ -0.46
NPHP4-202ENST00000378161 ZNF410Q86VK4 478 aa12.16□□□□□ -0.46
NPHP4-202ENST00000378161 TRIM59Q8IWR1 403 aa12.16□□□□□ -0.46
NPHP4-202ENST00000378161 HTRA1Q92743 480 aa12.16□□□□□ -0.46
NPHP4-202ENST00000378161 ZNF486Q96H40 463 aaPredicted RBP12.16□□□□□ -0.46
NPHP4-202ENST00000378161 OXNAD1Q96HP4 312 aaPredicted RBP12.16□□□□□ -0.46
NPHP4-202ENST00000378161 FAM96AQ9H5X1 160 aa12.16□□□□□ -0.46
NPHP4-202ENST00000378161 PNPLA3Q9NST1 481 aa12.16□□□□□ -0.46
NPHP4-202ENST00000378161 SESN1Q9Y6P5 492 aa12.16□□□□□ -0.46
NPHP4-202ENST00000378161 FADS2P1A8MWK0 482 aa12.16□□□□□ -0.46
NPHP4-202ENST00000378161 MIF4GDA9UHW6 222 aaKnown RBP12.16□□□□□ -0.46
NPHP4-202ENST00000378161 MAGEA4P43358 317 aa12.16□□□□□ -0.46
NPHP4-202ENST00000378161 SLC12A2P55011 1212 aa12.16□□□□□ -0.46
NPHP4-202ENST00000378161 TAGLNQ01995 201 aaKnown RBP12.16□□□□□ -0.46
NPHP4-202ENST00000378161 NEDD8Q15843 81 aa12.16□□□□□ -0.46
NPHP4-202ENST00000378161 SETD3Q86TU7 594 aaPredicted RBP12.16□□□□□ -0.46
NPHP4-202ENST00000378161 FAM172AQ8WUF8 416 aa12.16□□□□□ -0.46
NPHP4-202ENST00000378161 TP63Q9H3D4 680 aaPredicted RBP12.16□□□□□ -0.46
NPHP4-202ENST00000378161 SIAEQ9HAT2 523 aa12.16□□□□□ -0.46
NPHP4-202ENST00000378161 KCNN3Q9UGI6 736 aa12.16□□□□□ -0.46
NPHP4-202ENST00000378161 SERPINB13Q9UIV8 391 aa12.16□□□□□ -0.46
NPHP4-202ENST00000378161 STOML2Q9UJZ1 356 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms