RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 IDI2Q9BXS1 227 aa14.08□□□□□ -0.16
GPC6-201ENST00000377047 USP20Q9Y2K6 914 aa14.08□□□□□ -0.16
GPC6-201ENST00000377047 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.08□□□□□ -0.16
GPC6-201ENST00000377047 EVPLLA8MZ36 301 aa14.08□□□□□ -0.16
GPC6-201ENST00000377047 AKAP3O75969 853 aa14.08□□□□□ -0.16
GPC6-201ENST00000377047 LSM8O95777 96 aaKnown RBP14.08□□□□□ -0.16
GPC6-201ENST00000377047 RRM1P23921 792 aa14.08□□□□□ -0.16
GPC6-201ENST00000377047 AXLP30530 894 aa14.08□□□□□ -0.16
GPC6-201ENST00000377047 CDC16Q13042 620 aa14.08□□□□□ -0.16
GPC6-201ENST00000377047 PKN1Q16512 942 aa14.08□□□□□ -0.16
GPC6-201ENST00000377047 ERLEC1Q96DZ1 483 aa14.08□□□□□ -0.16
GPC6-201ENST00000377047 GID8Q9NWU2 228 aa14.08□□□□□ -0.16
GPC6-201ENST00000377047 TSPAN16Q9UKR8 245 aa14.08□□□□□ -0.16
GPC6-201ENST00000377047 CDY2AQ9Y6F7 541 aa14.08□□□□□ -0.16
GPC6-201ENST00000377047 CDY1Q9Y6F8 540 aa14.08□□□□□ -0.16
GPC6-201ENST00000377047 VGLL3A8MV65 326 aa14.08□□□□□ -0.16
GPC6-201ENST00000377047 LACTBL1A8MY62 500 aa14.08□□□□□ -0.16
GPC6-201ENST00000377047 XYLBO75191 536 aa14.08□□□□□ -0.16
GPC6-201ENST00000377047 SLC39A12Q504Y0 691 aa14.08□□□□□ -0.16
GPC6-201ENST00000377047 TATDN2Q93075 761 aa14.08□□□□□ -0.16
GPC6-201ENST00000377047 SMARCD1Q96GM5 515 aa14.08□□□□□ -0.16
GPC6-201ENST00000377047 MANSC1Q9H8J5 431 aa14.08□□□□□ -0.16
GPC6-201ENST00000377047 H2AFY2Q9P0M6 372 aaPredicted RBP14.08□□□□□ -0.16
GPC6-201ENST00000377047 TMEM120BA0PK00 339 aa14.07□□□□□ -0.16
GPC6-201ENST00000377047 ERVK-10P10266 1014 aa14.07□□□□□ -0.16
GPC6-201ENST00000377047 MLNP12872 115 aa14.07□□□□□ -0.16
GPC6-201ENST00000377047 IKBKEQ14164 716 aa14.07□□□□□ -0.16
GPC6-201ENST00000377047 PRAMEF19Q5SWL8 479 aa14.07□□□□□ -0.16
GPC6-201ENST00000377047 SV2AQ7L0J3 742 aa14.07□□□□□ -0.16
GPC6-201ENST00000377047 RNF168Q8IYW5 571 aaPredicted RBP14.07□□□□□ -0.16
GPC6-201ENST00000377047 SDR42E2A6NKP2 422 aa14.07□□□□□ -0.16
GPC6-201ENST00000377047 SUPT7LO94864 414 aa14.07□□□□□ -0.16
GPC6-201ENST00000377047 FNTAP49354 379 aa14.07□□□□□ -0.16
GPC6-201ENST00000377047 RARRES1P49788 294 aa14.07□□□□□ -0.16
GPC6-201ENST00000377047 NBPF20Q3BBV1 942 aa14.07□□□□□ -0.16
GPC6-201ENST00000377047 CSGALNACT1Q8TDX6 532 aa14.07□□□□□ -0.16
GPC6-201ENST00000377047 CELF6Q96J87 481 aaKnown RBP14.07□□□□□ -0.16
GPC6-201ENST00000377047 ROPN1BQ9BZX4 212 aaPredicted RBP14.07□□□□□ -0.16
GPC6-201ENST00000377047 ISCUQ9H1K1 167 aa14.07□□□□□ -0.16
GPC6-201ENST00000377047 ROPN1Q9HAT0 212 aaPredicted RBP14.07□□□□□ -0.16
GPC6-201ENST00000377047 NMRK1Q9NWW6 199 aa14.07□□□□□ -0.16
GPC6-201ENST00000377047 DYRK1BQ9Y463 629 aa14.07□□□□□ -0.16
GPC6-201ENST00000377047 KRT87PA6NCN2 255 aa14.07□□□□□ -0.16
GPC6-201ENST00000377047 ZBTB39O15060 712 aa14.07□□□□□ -0.16
GPC6-201ENST00000377047 RD3Q7Z3Z2 195 aa14.07□□□□□ -0.16
GPC6-201ENST00000377047 RIBC1Q8N443 379 aaPredicted RBP14.07□□□□□ -0.16
GPC6-201ENST00000377047 ADAM2Q99965 735 aa14.07□□□□□ -0.16
GPC6-201ENST00000377047 PACSIN1Q9BY11 444 aa14.07□□□□□ -0.16
GPC6-201ENST00000377047 UBE2OQ9C0C9 1292 aaKnown RBP14.07□□□□□ -0.16
GPC6-201ENST00000377047 RAD18Q9NS91 495 aa14.07□□□□□ -0.16
GPC6-201ENST00000377047 UBP1Q9NZI7 540 aa14.07□□□□□ -0.16
GPC6-201ENST00000377047 V9GYQ6 96 aa14.07□□□□□ -0.16
GPC6-201ENST00000377047 CFAP73A6NFT4 308 aa14.07□□□□□ -0.16
GPC6-201ENST00000377047 LRRIQ3A6PVS8 624 aaPredicted RBP14.07□□□□□ -0.16
GPC6-201ENST00000377047 LGALS2P05162 132 aa14.07□□□□□ -0.16
GPC6-201ENST00000377047 CDH2P19022 906 aaPredicted RBP14.07□□□□□ -0.16
GPC6-201ENST00000377047 TJAP1Q5JTD0 557 aa14.07□□□□□ -0.16
GPC6-201ENST00000377047 ENGASEQ8NFI3 743 aa14.07□□□□□ -0.16
GPC6-201ENST00000377047 PPP1R13LQ8WUF5 828 aa14.07□□□□□ -0.16
GPC6-201ENST00000377047 A1CFQ9NQ94 594 aaKnown RBP14.07□□□□□ -0.16
GPC6-201ENST00000377047 EIF3LQ9Y262 564 aaKnown RBP14.07□□□□□ -0.16
GPC6-201ENST00000377047 KIAA1210Q9ULL0 1709 aa14.07□□□□□ -0.16
GPC6-201ENST00000377047 F8VZ95 297 aa14.07□□□□□ -0.16
GPC6-201ENST00000377047 KLHL2O95198 593 aa14.07□□□□□ -0.16
GPC6-201ENST00000377047 YWHAQP27348 245 aa14.07□□□□□ -0.16
GPC6-201ENST00000377047 SPOCD1Q6ZMY3 1216 aa14.07□□□□□ -0.16
GPC6-201ENST00000377047 FBXO36Q8NEA4 188 aa14.07□□□□□ -0.16
GPC6-201ENST00000377047 LPCAT1Q8NF37 534 aa14.07□□□□□ -0.16
GPC6-201ENST00000377047 SLC5A5Q92911 643 aa14.07□□□□□ -0.16
GPC6-201ENST00000377047 GPRC5DQ9NZD1 345 aa14.07□□□□□ -0.16
GPC6-201ENST00000377047 VWDEQ8N2E2 1590 aa14.06□□□□□ -0.16
GPC6-201ENST00000377047 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.06□□□□□ -0.16
GPC6-201ENST00000377047 MICAL2O94851 1124 aa14.06□□□□□ -0.16
GPC6-201ENST00000377047 SLITRK3O94933 977 aa14.06□□□□□ -0.16
GPC6-201ENST00000377047 CYP2F1P24903 491 aa14.06□□□□□ -0.16
GPC6-201ENST00000377047 MAPK9P45984 424 aa14.06□□□□□ -0.16
GPC6-201ENST00000377047 HDAC4P56524 1084 aa14.06□□□□□ -0.16
GPC6-201ENST00000377047 C16orf87Q6PH81 154 aa14.06□□□□□ -0.16
GPC6-201ENST00000377047 OTOP1Q7RTM1 612 aa14.06□□□□□ -0.16
GPC6-201ENST00000377047 XPO6Q96QU8 1125 aaKnown RBP14.06□□□□□ -0.16
GPC6-201ENST00000377047 SLIT1O75093 1534 aa14.06□□□□□ -0.16
GPC6-201ENST00000377047 PHF20L1A8MW92 1017 aa14.06□□□□□ -0.16
GPC6-201ENST00000377047 CAPN15O75808 1086 aa14.06□□□□□ -0.16
GPC6-201ENST00000377047 PCNAP12004 261 aa14.06□□□□□ -0.16
GPC6-201ENST00000377047 TERF2Q15554 542 aa14.06□□□□□ -0.16
GPC6-201ENST00000377047 AGBL2Q5U5Z8 902 aa14.06□□□□□ -0.16
GPC6-201ENST00000377047 NIPA1Q7RTP0 329 aa14.06□□□□□ -0.16
GPC6-201ENST00000377047 NT5DC3Q86UY8 548 aa14.06□□□□□ -0.16
GPC6-201ENST00000377047 LONP2Q86WA8 852 aa14.06□□□□□ -0.16
GPC6-201ENST00000377047 CARD9Q9H257 536 aa14.06□□□□□ -0.16
GPC6-201ENST00000377047 LNPEPQ9UIQ6 1025 aa14.06□□□□□ -0.16
GPC6-201ENST00000377047 MAPTP10636 758 aaKnown RBP14.06□□□□□ -0.16
GPC6-201ENST00000377047 MAP2P11137 1827 aaKnown RBP14.06□□□□□ -0.16
GPC6-201ENST00000377047 GRK3P35626 688 aa14.06□□□□□ -0.16
GPC6-201ENST00000377047 SGCGQ13326 291 aa14.06□□□□□ -0.16
GPC6-201ENST00000377047 SLC29A2Q14542 456 aa14.06□□□□□ -0.16
GPC6-201ENST00000377047 GALNTL6Q49A17 601 aa14.06□□□□□ -0.16
GPC6-201ENST00000377047 DENND1BQ6P3S1 775 aa14.06□□□□□ -0.16
GPC6-201ENST00000377047 C10orf53Q8N6V4 93 aa14.06□□□□□ -0.16
GPC6-201ENST00000377047 PLSCR1O15162 318 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms