RNA–Protein interactions for RNA: ENST00000376957.6

SRM-201, Transcript of spermidine synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRM, Length 1,266 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-201ENST00000376957 SMYD5Q6GMV2 418 aa23.27■■□□□ 1.32
SRM-201ENST00000376957 KLHDC10Q6PID8 442 aa23.27■■□□□ 1.32
SRM-201ENST00000376957 MAMSTRQ6ZN01 415 aa23.27■■□□□ 1.32
SRM-201ENST00000376957 GPRIN1Q7Z2K8 1008 aa23.27■■□□□ 1.32
SRM-201ENST00000376957 PIGZQ86VD9 579 aa23.27■■□□□ 1.32
SRM-201ENST00000376957 RBBP8NLQ8NC74 664 aaPredicted RBP23.27■■□□□ 1.32
SRM-201ENST00000376957 P2RY13Q9BPV8 354 aa23.27■■□□□ 1.32
SRM-201ENST00000376957 UBE2TQ9NPD8 197 aaPredicted RBP23.27■■□□□ 1.32
SRM-201ENST00000376957 CLIC5Q9NZA1 410 aa23.27■■□□□ 1.32
SRM-201ENST00000376957 DNMT3LQ9UJW3 386 aa23.27■■□□□ 1.32
SRM-201ENST00000376957 USP3Q9Y6I4 520 aa23.27■■□□□ 1.32
SRM-201ENST00000376957 KIF26AQ9ULI4 1882 aaPredicted RBP23.26■■□□□ 1.31
SRM-201ENST00000376957 PES1O00541 588 aaKnown RBP23.26■■□□□ 1.31
SRM-201ENST00000376957 TRDMT1O14717 391 aaKnown RBP23.26■■□□□ 1.31
SRM-201ENST00000376957 ATG13O75143 517 aa23.26■■□□□ 1.31
SRM-201ENST00000376957 ADH1CP00326 375 aa23.26■■□□□ 1.31
SRM-201ENST00000376957 RARGP13631 454 aa23.26■■□□□ 1.31
SRM-201ENST00000376957 KRT5P13647 590 aa23.26■■□□□ 1.31
SRM-201ENST00000376957 DRD1P21728 446 aa23.26■■□□□ 1.31
SRM-201ENST00000376957 GJA4P35212 333 aa23.26■■□□□ 1.31
SRM-201ENST00000376957 TKTL1P51854 596 aa23.26■■□□□ 1.31
SRM-201ENST00000376957 NRLP54845 237 aa23.26■■□□□ 1.31
SRM-201ENST00000376957 CNGA2Q16280 664 aa23.26■■□□□ 1.31
SRM-201ENST00000376957 ZNF528Q3MIS6 628 aa23.26■■□□□ 1.31
SRM-201ENST00000376957 FBXO43Q4G163 708 aa23.26■■□□□ 1.31
SRM-201ENST00000376957 TRIM65Q6PJ69 517 aa23.26■■□□□ 1.31
SRM-201ENST00000376957 LCLAT1Q6UWP7 414 aa23.26■■□□□ 1.31
SRM-201ENST00000376957 RSRC2Q7L4I2 434 aaKnown RBP23.26■■□□□ 1.31
SRM-201ENST00000376957 SIX6OS1Q8N1H7 587 aa23.26■■□□□ 1.31
SRM-201ENST00000376957 ZNF276Q8N554 614 aa23.26■■□□□ 1.31
SRM-201ENST00000376957 UBR7Q8N806 425 aa23.26■■□□□ 1.31
SRM-201ENST00000376957 GPT2Q8TD30 523 aa23.26■■□□□ 1.31
SRM-201ENST00000376957 TUBGCP2Q9BSJ2 902 aa23.26■■□□□ 1.31
SRM-201ENST00000376957 SEMA4AQ9H3S1 761 aa23.26■■□□□ 1.31
SRM-201ENST00000376957 MYO16Q9Y6X6 1858 aa23.26■■□□□ 1.31
SRM-201ENST00000376957 SHISA7A6NL88 538 aa23.25■■□□□ 1.31
SRM-201ENST00000376957 O00370 1275 aa23.25■■□□□ 1.31
SRM-201ENST00000376957 ZBED1O96006 694 aa23.25■■□□□ 1.31
SRM-201ENST00000376957 PLA2G4AP47712 749 aa23.25■■□□□ 1.31
SRM-201ENST00000376957 CSTF1Q05048 431 aaKnown RBP23.25■■□□□ 1.31
SRM-201ENST00000376957 PDE4CQ08493 712 aa23.25■■□□□ 1.31
SRM-201ENST00000376957 MTAPQ13126 283 aa23.25■■□□□ 1.31
SRM-201ENST00000376957 FZD5Q13467 585 aa23.25■■□□□ 1.31
SRM-201ENST00000376957 PREPLQ4J6C6 727 aaPredicted RBP23.25■■□□□ 1.31
SRM-201ENST00000376957 C10orf120Q5SQS8 335 aa23.25■■□□□ 1.31
SRM-201ENST00000376957 TXNDC11Q6PKC3 985 aa23.25■■□□□ 1.31
SRM-201ENST00000376957 ARHGEF19Q8IW93 802 aa23.25■■□□□ 1.31
SRM-201ENST00000376957 SPEM1Q8N4L4 309 aa23.25■■□□□ 1.31
SRM-201ENST00000376957 RIN3Q8TB24 985 aa23.25■■□□□ 1.31
SRM-201ENST00000376957 CRACR2AQ9BSW2 395 aa23.25■■□□□ 1.31
SRM-201ENST00000376957 FAM126AQ9BYI3 521 aaPredicted RBP23.25■■□□□ 1.31
SRM-201ENST00000376957 LINC00597Q9H2U6 94 aa23.25■■□□□ 1.31
SRM-201ENST00000376957 FAM86C1Q9NVL1 165 aa23.25■■□□□ 1.31
SRM-201ENST00000376957 ANO10Q9NW15 660 aa23.25■■□□□ 1.31
SRM-201ENST00000376957 STRIP2Q9ULQ0 834 aa23.25■■□□□ 1.31
SRM-201ENST00000376957 F5P12259 2224 aa23.24■■□□□ 1.31
SRM-201ENST00000376957 A0A1W2PQH9 124 aa23.24■■□□□ 1.31
SRM-201ENST00000376957 EEF1GP26641 437 aaKnown RBP23.24■■□□□ 1.31
SRM-201ENST00000376957 NBL1P41271 181 aa23.24■■□□□ 1.31
SRM-201ENST00000376957 CXCL12P48061 93 aa23.24■■□□□ 1.31
SRM-201ENST00000376957 COG7P83436 770 aa23.24■■□□□ 1.31
SRM-201ENST00000376957 VWA3BQ502W6 1294 aa23.24■■□□□ 1.31
SRM-201ENST00000376957 TMEM196Q5HYL7 178 aa23.24■■□□□ 1.31
SRM-201ENST00000376957 RAB41Q5JT25 222 aa23.24■■□□□ 1.31
SRM-201ENST00000376957 CCDC183Q5T5S1 534 aa23.24■■□□□ 1.31
SRM-201ENST00000376957 TTC30AQ86WT1 665 aa23.24■■□□□ 1.31
SRM-201ENST00000376957 IRF2BP1Q8IU81 584 aa23.24■■□□□ 1.31
SRM-201ENST00000376957 ADGRG2Q8IZP9 1017 aa23.24■■□□□ 1.31
SRM-201ENST00000376957 ZNF687Q8N1G0 1237 aa23.24■■□□□ 1.31
SRM-201ENST00000376957 ANKRD20A12PQ8NF67 263 aa23.24■■□□□ 1.31
SRM-201ENST00000376957 KCTD13Q8WZ19 329 aa23.24■■□□□ 1.31
SRM-201ENST00000376957 GOLGA1Q92805 767 aa23.24■■□□□ 1.31
SRM-201ENST00000376957 CD101Q93033 1021 aa23.24■■□□□ 1.31
SRM-201ENST00000376957 MED15Q96RN5 788 aa23.24■■□□□ 1.31
SRM-201ENST00000376957 NDST4Q9H3R1 872 aa23.24■■□□□ 1.31
SRM-201ENST00000376957 OLA1Q9NTK5 396 aaKnown RBP23.24■■□□□ 1.31
SRM-201ENST00000376957 MTPAPQ9NVV4 582 aaKnown RBP eCLIP23.24■■□□□ 1.31
SRM-201ENST00000376957 APEX2Q9UBZ4 518 aa23.24■■□□□ 1.31
SRM-201ENST00000376957 COL4A3Q01955 1670 aa23.23■■□□□ 1.31
SRM-201ENST00000376957 KCNJ18B7U540 433 aa23.23■■□□□ 1.31
SRM-201ENST00000376957 SP9P0CG40 484 aa23.23■■□□□ 1.31
SRM-201ENST00000376957 ZXDBP98169 803 aa23.23■■□□□ 1.31
SRM-201ENST00000376957 KCNJ12Q14500 433 aa23.23■■□□□ 1.31
SRM-201ENST00000376957 BTBD8Q5XKL5 378 aa23.23■■□□□ 1.31
SRM-201ENST00000376957 RBM43Q6ZSC3 357 aaKnown RBP23.23■■□□□ 1.31
SRM-201ENST00000376957 NUDT18Q6ZVK8 323 aa23.23■■□□□ 1.31
SRM-201ENST00000376957 UBA3Q8TBC4 463 aa23.23■■□□□ 1.31
SRM-201ENST00000376957 ENOX1Q8TC92 643 aaKnown RBP23.23■■□□□ 1.31
SRM-201ENST00000376957 ATRIPQ8WXE1 791 aa23.23■■□□□ 1.31
SRM-201ENST00000376957 KAT5Q92993 513 aa23.23■■□□□ 1.31
SRM-201ENST00000376957 NKD2Q969F2 451 aaPredicted RBP23.23■■□□□ 1.31
SRM-201ENST00000376957 WDR3Q9UNX4 943 aaKnown RBP eCLIP23.23■■□□□ 1.31
SRM-201ENST00000376957 NFE2L3Q9Y4A8 694 aa23.23■■□□□ 1.31
SRM-201ENST00000376957 OTOL1A6NHN0 477 aaPredicted RBP23.22■■□□□ 1.31
SRM-201ENST00000376957 PROB1E7EW31 1015 aa23.22■■□□□ 1.31
SRM-201ENST00000376957 M0QYV0 167 aa23.22■■□□□ 1.31
SRM-201ENST00000376957 USP8P40818 1118 aa23.22■■□□□ 1.31
SRM-201ENST00000376957 MRE11P49959 708 aa23.22■■□□□ 1.31
SRM-201ENST00000376957 GALK1P51570 392 aa23.22■■□□□ 1.31
SRM-201ENST00000376957 YWHAGP61981 247 aaKnown RBP eCLIP23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms