RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 SMAPO00193 183 aa21.09■□□□□ 0.97
VSX1-202ENST00000376709 GABBR2O75899 941 aa21.09■□□□□ 0.97
VSX1-202ENST00000376709 GNAT1P11488 350 aa21.09■□□□□ 0.97
VSX1-202ENST00000376709 LCP1P13796 627 aa21.09■□□□□ 0.97
VSX1-202ENST00000376709 GCAP28676 217 aa21.09■□□□□ 0.97
VSX1-202ENST00000376709 PHBP35232 272 aa21.09■□□□□ 0.97
VSX1-202ENST00000376709 NRLP54845 237 aa21.09■□□□□ 0.97
VSX1-202ENST00000376709 PURAQ00577 322 aaKnown RBP21.09■□□□□ 0.97
VSX1-202ENST00000376709 ZNF618Q5T7W0 954 aa21.09■□□□□ 0.97
VSX1-202ENST00000376709 TWF2Q6IBS0 349 aaKnown RBP21.09■□□□□ 0.97
VSX1-202ENST00000376709 ARHGEF18Q6ZSZ5 1173 aa21.09■□□□□ 0.97
VSX1-202ENST00000376709 PDIK1LQ8N165 341 aa21.09■□□□□ 0.97
VSX1-202ENST00000376709 CRYBG2Q8N1P7 616 aa21.09■□□□□ 0.97
VSX1-202ENST00000376709 GDAP1Q8TB36 358 aa21.09■□□□□ 0.97
VSX1-202ENST00000376709 CLEC4CQ8WTT0 213 aa21.09■□□□□ 0.97
VSX1-202ENST00000376709 NCAPGQ9BPX3 1015 aa21.09■□□□□ 0.97
VSX1-202ENST00000376709 PCDH18Q9HCL0 1135 aa21.09■□□□□ 0.97
VSX1-202ENST00000376709 Q9Y3F1 56 aa21.09■□□□□ 0.97
VSX1-202ENST00000376709 HEY1Q9Y5J3 304 aa21.09■□□□□ 0.97
VSX1-202ENST00000376709 GOLGA6L7A0A1B0GV03 622 aa21.08■□□□□ 0.97
VSX1-202ENST00000376709 APOL1O14791 398 aa21.08■□□□□ 0.97
VSX1-202ENST00000376709 HUS1O60921 280 aa21.08■□□□□ 0.97
VSX1-202ENST00000376709 BCAR1P56945 870 aa21.08■□□□□ 0.97
VSX1-202ENST00000376709 SOX4Q06945 474 aaPredicted RBP21.08■□□□□ 0.97
VSX1-202ENST00000376709 MPP2Q14168 576 aa21.08■□□□□ 0.97
VSX1-202ENST00000376709 TTC31Q49AM3 519 aaPredicted RBP21.08■□□□□ 0.97
VSX1-202ENST00000376709 ANKRD20A8PQ5CZ79 823 aa21.08■□□□□ 0.97
VSX1-202ENST00000376709 PPP6R3Q5H9R7 873 aaPredicted RBP21.08■□□□□ 0.97
VSX1-202ENST00000376709 TDRPQ86YL5 185 aa21.08■□□□□ 0.97
VSX1-202ENST00000376709 PLD5Q8N7P1 536 aa21.08■□□□□ 0.97
VSX1-202ENST00000376709 ATP11CQ8NB49 1132 aa21.08■□□□□ 0.97
VSX1-202ENST00000376709 MAML1Q92585 1016 aa21.08■□□□□ 0.97
VSX1-202ENST00000376709 MRRFQ96E11 262 aaKnown RBP21.08■□□□□ 0.97
VSX1-202ENST00000376709 TSPAN18Q96SJ8 248 aa21.08■□□□□ 0.97
VSX1-202ENST00000376709 TCRBV7S3A2A0A539 114 aa21.07■□□□□ 0.96
VSX1-202ENST00000376709 TMEM63AO94886 807 aa21.07■□□□□ 0.96
VSX1-202ENST00000376709 AKR1A1P14550 325 aa21.07■□□□□ 0.96
VSX1-202ENST00000376709 KRT15P19012 456 aa21.07■□□□□ 0.96
VSX1-202ENST00000376709 IL4RP24394 825 aa21.07■□□□□ 0.96
VSX1-202ENST00000376709 STX2P32856 288 aa21.07■□□□□ 0.96
VSX1-202ENST00000376709 HDAC4P56524 1084 aa21.07■□□□□ 0.96
VSX1-202ENST00000376709 SREBF2Q12772 1141 aa21.07■□□□□ 0.96
VSX1-202ENST00000376709 MTM1Q13496 603 aa21.07■□□□□ 0.96
VSX1-202ENST00000376709 MSS51Q4VC12 460 aa21.07■□□□□ 0.96
VSX1-202ENST00000376709 XKR4Q5GH76 650 aa21.07■□□□□ 0.96
VSX1-202ENST00000376709 ADGRF2Q8IZF7 708 aa21.07■□□□□ 0.96
VSX1-202ENST00000376709 NME8Q8N427 588 aa21.07■□□□□ 0.96
VSX1-202ENST00000376709 SLC2A14Q8TDB8 520 aa21.07■□□□□ 0.96
VSX1-202ENST00000376709 ARHGAP39Q9C0H5 1083 aa21.07■□□□□ 0.96
VSX1-202ENST00000376709 PPCSQ9HAB8 311 aa21.07■□□□□ 0.96
VSX1-202ENST00000376709 DCAF8L1A6NGE4 600 aa21.07■□□□□ 0.96
VSX1-202ENST00000376709 TCP11X1B4DZS4 312 aa21.07■□□□□ 0.96
VSX1-202ENST00000376709 MDM4O15151 490 aa21.07■□□□□ 0.96
VSX1-202ENST00000376709 C6orf222P0C671 652 aaPredicted RBP21.07■□□□□ 0.96
VSX1-202ENST00000376709 TGM2P21980 687 aa21.07■□□□□ 0.96
VSX1-202ENST00000376709 SF3A3Q12874 501 aaKnown RBP eCLIP21.07■□□□□ 0.96
VSX1-202ENST00000376709 CA9Q16790 459 aa21.07■□□□□ 0.96
VSX1-202ENST00000376709 SLC26A9Q7LBE3 791 aa21.07■□□□□ 0.96
VSX1-202ENST00000376709 TNIP3Q96KP6 325 aa21.07■□□□□ 0.96
VSX1-202ENST00000376709 ELAC2Q9BQ52 826 aaKnown RBP21.07■□□□□ 0.96
VSX1-202ENST00000376709 TLL2Q9Y6L7 1015 aa21.07■□□□□ 0.96
VSX1-202ENST00000376709 TFE3P19532 575 aaPredicted RBP21.06■□□□□ 0.96
VSX1-202ENST00000376709 SSTR1P30872 391 aa21.06■□□□□ 0.96
VSX1-202ENST00000376709 GPX6P59796 221 aa21.06■□□□□ 0.96
VSX1-202ENST00000376709 RNASELQ05823 741 aaKnown RBP21.06■□□□□ 0.96
VSX1-202ENST00000376709 BBS9Q3SYG4 887 aa21.06■□□□□ 0.96
VSX1-202ENST00000376709 PPP1R21Q6ZMI0 780 aa21.06■□□□□ 0.96
VSX1-202ENST00000376709 PIGWQ7Z7B1 504 aa21.06■□□□□ 0.96
VSX1-202ENST00000376709 TRABD2AQ86V40 505 aa21.06■□□□□ 0.96
VSX1-202ENST00000376709 ARRDC4Q8NCT1 418 aa21.06■□□□□ 0.96
VSX1-202ENST00000376709 SMG8Q8ND04 991 aaKnown RBP21.06■□□□□ 0.96
VSX1-202ENST00000376709 FBXO36Q8NEA4 188 aa21.06■□□□□ 0.96
VSX1-202ENST00000376709 ZNF670Q9BS34 389 aa21.06■□□□□ 0.96
VSX1-202ENST00000376709 CAPN7Q9Y6W3 813 aa21.06■□□□□ 0.96
VSX1-202ENST00000376709 CLUHO75153 1309 aa21.06■□□□□ 0.96
VSX1-202ENST00000376709 KCNN4O15554 427 aa21.06■□□□□ 0.96
VSX1-202ENST00000376709 PTPN9P43378 593 aa21.06■□□□□ 0.96
VSX1-202ENST00000376709 LILRA4P59901 499 aa21.06■□□□□ 0.96
VSX1-202ENST00000376709 C3orf62Q6ZUJ4 267 aa21.06■□□□□ 0.96
VSX1-202ENST00000376709 PALM2Q8IXS6 379 aa21.06■□□□□ 0.96
VSX1-202ENST00000376709 PQLC3Q8N755 202 aa21.06■□□□□ 0.96
VSX1-202ENST00000376709 PCDH19Q8TAB3 1148 aa21.06■□□□□ 0.96
VSX1-202ENST00000376709 UBN1Q9NPG3 1134 aa21.06■□□□□ 0.96
VSX1-202ENST00000376709 PSMC3IPQ9P2W1 217 aaPredicted RBP21.06■□□□□ 0.96
VSX1-202ENST00000376709 SLC24A2Q9UI40 661 aa21.06■□□□□ 0.96
VSX1-202ENST00000376709 ABT1Q9ULW3 272 aaKnown RBP21.06■□□□□ 0.96
VSX1-202ENST00000376709 FAM47DPA6NHR8 397 aa21.05■□□□□ 0.96
VSX1-202ENST00000376709 E7ESA3 106 aa21.05■□□□□ 0.96
VSX1-202ENST00000376709 ACADSBP45954 432 aa21.05■□□□□ 0.96
VSX1-202ENST00000376709 GEMIN4P57678 1058 aaKnown RBP21.05■□□□□ 0.96
VSX1-202ENST00000376709 SPRED3Q2MJR0 410 aa21.05■□□□□ 0.96
VSX1-202ENST00000376709 VSIG1Q86XK7 387 aa21.05■□□□□ 0.96
VSX1-202ENST00000376709 CKAP2Q8WWK9 683 aa21.05■□□□□ 0.96
VSX1-202ENST00000376709 OSBPL7Q9BZF2 842 aa21.05■□□□□ 0.96
VSX1-202ENST00000376709 TRABDQ9H4I3 376 aa21.05■□□□□ 0.96
VSX1-202ENST00000376709 FSBPO95073 299 aa21.04■□□□□ 0.96
VSX1-202ENST00000376709 MAP3K6O95382 1288 aa21.04■□□□□ 0.96
VSX1-202ENST00000376709 ZBED1O96006 694 aa21.04■□□□□ 0.96
VSX1-202ENST00000376709 SLC20A2Q08357 652 aa21.04■□□□□ 0.96
VSX1-202ENST00000376709 PKN2Q16513 984 aaKnown RBP21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms