RNA–Protein interactions for RNA: ENST00000376656.8

TRIM39-201, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 2 BASIC

Gene TRIM39, Length 3,338 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-201ENST00000376656 GDPD5Q8WTR4 605 aa17.16■□□□□ 0.34
TRIM39-201ENST00000376656 TFAP2BQ92481 460 aa17.16■□□□□ 0.34
TRIM39-201ENST00000376656 MCF2LO15068 1137 aa17.16■□□□□ 0.34
TRIM39-201ENST00000376656 LSM8O95777 96 aaKnown RBP17.16■□□□□ 0.34
TRIM39-201ENST00000376656 KRT7P08729 469 aa17.16■□□□□ 0.34
TRIM39-201ENST00000376656 VAV1P15498 845 aa17.16■□□□□ 0.34
TRIM39-201ENST00000376656 VCLP18206 1134 aa17.16■□□□□ 0.34
TRIM39-201ENST00000376656 TAP1Q03518 808 aa17.16■□□□□ 0.34
TRIM39-201ENST00000376656 TBCCQ15814 346 aa17.16■□□□□ 0.34
TRIM39-201ENST00000376656 TAZQ16635 292 aa17.16■□□□□ 0.34
TRIM39-201ENST00000376656 EMC1Q8N766 993 aa17.16■□□□□ 0.34
TRIM39-201ENST00000376656 STKLD1Q8NE28 680 aa17.16■□□□□ 0.34
TRIM39-201ENST00000376656 HIPK4Q8NE63 616 aa17.16■□□□□ 0.34
TRIM39-201ENST00000376656 NMD3Q96D46 503 aaKnown RBP17.16■□□□□ 0.34
TRIM39-201ENST00000376656 KLHL4Q9C0H6 718 aa17.16■□□□□ 0.34
TRIM39-201ENST00000376656 PLAC1Q9HBJ0 212 aa17.16■□□□□ 0.34
TRIM39-201ENST00000376656 PDLIM7Q9NR12 457 aa17.16■□□□□ 0.34
TRIM39-201ENST00000376656 CLIC5Q9NZA1 410 aa17.16■□□□□ 0.34
TRIM39-201ENST00000376656 AOC1P19801 751 aa17.15■□□□□ 0.34
TRIM39-201ENST00000376656 HIRAP54198 1017 aaPredicted RBP17.15■□□□□ 0.34
TRIM39-201ENST00000376656 YWHAZP63104 245 aaKnown RBP17.15■□□□□ 0.34
TRIM39-201ENST00000376656 IRX4P78413 519 aa17.15■□□□□ 0.34
TRIM39-201ENST00000376656 USP4Q13107 963 aa17.15■□□□□ 0.34
TRIM39-201ENST00000376656 GRM2Q14416 872 aa17.15■□□□□ 0.34
TRIM39-201ENST00000376656 THNSL1Q8IYQ7 743 aa17.15■□□□□ 0.34
TRIM39-201ENST00000376656 FAF2Q96CS3 445 aa17.15■□□□□ 0.34
TRIM39-201ENST00000376656 MMP19Q99542 508 aa17.15■□□□□ 0.34
TRIM39-201ENST00000376656 CGRRF1Q99675 332 aa17.15■□□□□ 0.34
TRIM39-201ENST00000376656 APOL6Q9BWW8 343 aa17.15■□□□□ 0.34
TRIM39-201ENST00000376656 WDR81Q562E7 1941 aa17.15■□□□□ 0.34
TRIM39-201ENST00000376656 APOC4-APOC2K7ER74 178 aa17.15■□□□□ 0.34
TRIM39-201ENST00000376656 STK10O94804 968 aaKnown RBP17.15■□□□□ 0.34
TRIM39-201ENST00000376656 APOC2P02655 101 aa17.15■□□□□ 0.34
TRIM39-201ENST00000376656 VPS72Q15906 364 aa17.15■□□□□ 0.34
TRIM39-201ENST00000376656 DARS2Q6PI48 645 aaKnown RBP17.15■□□□□ 0.34
TRIM39-201ENST00000376656 DENND5BQ6ZUT9 1274 aa17.15■□□□□ 0.34
TRIM39-201ENST00000376656 KCTD6Q8NC69 237 aa17.15■□□□□ 0.34
TRIM39-201ENST00000376656 HSPH1Q92598 858 aa17.15■□□□□ 0.34
TRIM39-201ENST00000376656 CCDC124Q96CT7 223 aaKnown RBP17.15■□□□□ 0.34
TRIM39-201ENST00000376656 SHCBP1LQ9BZQ2 653 aa17.15■□□□□ 0.34
TRIM39-201ENST00000376656 PNPLA8Q9NP80 782 aa17.15■□□□□ 0.34
TRIM39-201ENST00000376656 SEPT9Q9UHD8 586 aaPredicted RBP17.15■□□□□ 0.34
TRIM39-201ENST00000376656 PCDHA10Q9Y5I2 948 aa17.15■□□□□ 0.34
TRIM39-201ENST00000376656 CLRN2A0PK11 232 aa17.14■□□□□ 0.34
TRIM39-201ENST00000376656 SPAG6O75602 509 aa17.14■□□□□ 0.34
TRIM39-201ENST00000376656 BPGMP07738 259 aa17.14■□□□□ 0.34
TRIM39-201ENST00000376656 PIM1P11309 404 aaPredicted RBP17.14■□□□□ 0.34
TRIM39-201ENST00000376656 RPS6P62753 249 aaKnown RBP17.14■□□□□ 0.34
TRIM39-201ENST00000376656 SP4Q02446 784 aa17.14■□□□□ 0.34
TRIM39-201ENST00000376656 TUBB3Q13509 450 aa17.14■□□□□ 0.34
TRIM39-201ENST00000376656 C8orf37Q96NL8 207 aa17.14■□□□□ 0.34
TRIM39-201ENST00000376656 TRIM56Q9BRZ2 755 aaKnown RBP17.14■□□□□ 0.34
TRIM39-201ENST00000376656 CALN1Q9BXU9 219 aa17.14■□□□□ 0.34
TRIM39-201ENST00000376656 RAVER2Q9HCJ3 691 aaKnown RBP17.14■□□□□ 0.34
TRIM39-201ENST00000376656 TXNDC9O14530 226 aa17.14■□□□□ 0.33
TRIM39-201ENST00000376656 LYPLA1O75608 230 aaPredicted RBP17.14■□□□□ 0.33
TRIM39-201ENST00000376656 PGM3O95394 542 aa17.14■□□□□ 0.33
TRIM39-201ENST00000376656 KRT3P12035 628 aa17.14■□□□□ 0.33
TRIM39-201ENST00000376656 INHBCP55103 352 aa17.14■□□□□ 0.33
TRIM39-201ENST00000376656 WASHC5Q12768 1159 aa17.14■□□□□ 0.33
TRIM39-201ENST00000376656 MMRN1Q13201 1228 aa17.14■□□□□ 0.33
TRIM39-201ENST00000376656 STX3Q13277 289 aa17.14■□□□□ 0.33
TRIM39-201ENST00000376656 HADHQ16836 314 aaKnown RBP17.14■□□□□ 0.33
TRIM39-201ENST00000376656 PTPN20Q4JDL3 420 aa17.14■□□□□ 0.33
TRIM39-201ENST00000376656 FAXCQ5TGI0 409 aa17.14■□□□□ 0.33
TRIM39-201ENST00000376656 FBXL19Q6PCT2 694 aa17.14■□□□□ 0.33
TRIM39-201ENST00000376656 EFCAB3Q8N7B9 438 aa17.14■□□□□ 0.33
TRIM39-201ENST00000376656 ZNF778Q96MU6 729 aa17.14■□□□□ 0.33
TRIM39-201ENST00000376656 CNTNAP2Q9UHC6 1331 aa17.14■□□□□ 0.33
TRIM39-201ENST00000376656 ARID2Q68CP9 1835 aa17.14■□□□□ 0.33
TRIM39-201ENST00000376656 CSH1P0DML2 217 aa17.14■□□□□ 0.33
TRIM39-201ENST00000376656 CSH2P0DML3 217 aa17.14■□□□□ 0.33
TRIM39-201ENST00000376656 NPR1P16066 1061 aa17.14■□□□□ 0.33
TRIM39-201ENST00000376656 ROR1Q01973 937 aa17.14■□□□□ 0.33
TRIM39-201ENST00000376656 CDK18Q07002 472 aa17.14■□□□□ 0.33
TRIM39-201ENST00000376656 PDK3Q15120 406 aa17.14■□□□□ 0.33
TRIM39-201ENST00000376656 MMEL1Q495T6 779 aa17.14■□□□□ 0.33
TRIM39-201ENST00000376656 SWSAP1Q6NVH7 229 aa17.14■□□□□ 0.33
TRIM39-201ENST00000376656 SDCCAG8Q86SQ7 713 aaPredicted RBP17.14■□□□□ 0.33
TRIM39-201ENST00000376656 MCF2L2Q86YR7 1114 aa17.14■□□□□ 0.33
TRIM39-201ENST00000376656 CDAN1Q8IWY9 1227 aa17.14■□□□□ 0.33
TRIM39-201ENST00000376656 NDUFAF2Q8N183 169 aa17.14■□□□□ 0.33
TRIM39-201ENST00000376656 MCPH1Q8NEM0 835 aa17.14■□□□□ 0.33
TRIM39-201ENST00000376656 HIC2Q96JB3 615 aa17.14■□□□□ 0.33
TRIM39-201ENST00000376656 XAB2Q9HCS7 855 aaKnown RBP17.14■□□□□ 0.33
TRIM39-201ENST00000376656 PREBQ9HCU5 417 aa17.14■□□□□ 0.33
TRIM39-201ENST00000376656 ZC3H7BQ9UGR2 993 aaKnown RBP17.14■□□□□ 0.33
TRIM39-201ENST00000376656 G3BP2Q9UN86 482 aaKnown RBP17.14■□□□□ 0.33
TRIM39-201ENST00000376656 STYXL1Q9Y6J8 313 aa17.14■□□□□ 0.33
TRIM39-201ENST00000376656 DGAT1O75907 488 aa17.13■□□□□ 0.33
TRIM39-201ENST00000376656 TRIP10Q15642 601 aa17.13■□□□□ 0.33
TRIM39-201ENST00000376656 DENND1BQ6P3S1 775 aa17.13■□□□□ 0.33
TRIM39-201ENST00000376656 MPP4Q96JB8 637 aa17.13■□□□□ 0.33
TRIM39-201ENST00000376656 MSTO1Q9BUK6 570 aa17.13■□□□□ 0.33
TRIM39-201ENST00000376656 TARS2Q9BW92 718 aaKnown RBP17.13■□□□□ 0.33
TRIM39-201ENST00000376656 CYP4F11Q9HBI6 524 aa17.13■□□□□ 0.33
TRIM39-201ENST00000376656 POPDC2Q9HBU9 364 aa17.13■□□□□ 0.33
TRIM39-201ENST00000376656 RAB6BQ9NRW1 208 aa17.13■□□□□ 0.33
TRIM39-201ENST00000376656 CISHQ9NSE2 258 aa17.13■□□□□ 0.33
TRIM39-201ENST00000376656 ZNF180Q9UJW8 692 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms