RNA–Protein interactions for RNA: ENST00000376496.4

CLCN6-206, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5 BASIC

Gene CLCN6, Length 2,922 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-206ENST00000376496 SMYD5Q6GMV2 418 aa13.16□□□□□ -0.3
CLCN6-206ENST00000376496 C1orf228Q6PIY5 440 aa13.16□□□□□ -0.3
CLCN6-206ENST00000376496 ATL2Q8NHH9 583 aa13.16□□□□□ -0.3
CLCN6-206ENST00000376496 UBE2Q2Q8WVN8 375 aa13.16□□□□□ -0.3
CLCN6-206ENST00000376496 EDEM1Q92611 657 aa13.16□□□□□ -0.3
CLCN6-206ENST00000376496 FAM193BQ96PV7 902 aaPredicted RBP13.16□□□□□ -0.3
CLCN6-206ENST00000376496 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.16□□□□□ -0.3
CLCN6-206ENST00000376496 M0QZQ0 153 aa13.16□□□□□ -0.3
CLCN6-206ENST00000376496 IFNB1P01574 187 aa13.16□□□□□ -0.3
CLCN6-206ENST00000376496 PCK1P35558 622 aa13.16□□□□□ -0.3
CLCN6-206ENST00000376496 RPL34P49207 117 aaKnown RBP13.16□□□□□ -0.3
CLCN6-206ENST00000376496 SULT1E1P49888 294 aa13.16□□□□□ -0.3
CLCN6-206ENST00000376496 FAAP100Q0VG06 881 aa13.16□□□□□ -0.3
CLCN6-206ENST00000376496 NME3Q13232 169 aa13.16□□□□□ -0.3
CLCN6-206ENST00000376496 BYSLQ13895 437 aaKnown RBP13.16□□□□□ -0.3
CLCN6-206ENST00000376496 DPYSL3Q14195 570 aa13.16□□□□□ -0.3
CLCN6-206ENST00000376496 KRT81Q14533 505 aa13.16□□□□□ -0.3
CLCN6-206ENST00000376496 INTS6LQ5JSJ4 861 aaKnown RBP13.16□□□□□ -0.3
CLCN6-206ENST00000376496 ABI1Q8IZP0 508 aa13.16□□□□□ -0.3
CLCN6-206ENST00000376496 URGCPQ8TCY9 931 aa13.16□□□□□ -0.3
CLCN6-206ENST00000376496 MAIP1Q8WWC4 291 aa13.16□□□□□ -0.3
CLCN6-206ENST00000376496 SUSD3Q96L08 255 aa13.16□□□□□ -0.3
CLCN6-206ENST00000376496 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.16□□□□□ -0.3
CLCN6-206ENST00000376496 VPS18Q9P253 973 aa13.16□□□□□ -0.3
CLCN6-206ENST00000376496 ATP11BQ9Y2G3 1177 aa13.16□□□□□ -0.3
CLCN6-206ENST00000376496 PCDHB7Q9Y5E2 793 aa13.16□□□□□ -0.3
CLCN6-206ENST00000376496 DPYSL4O14531 572 aa13.16□□□□□ -0.3
CLCN6-206ENST00000376496 CYP2F1P24903 491 aa13.16□□□□□ -0.3
CLCN6-206ENST00000376496 PCSK1P29120 753 aa13.16□□□□□ -0.3
CLCN6-206ENST00000376496 ADCY8P40145 1251 aa13.16□□□□□ -0.3
CLCN6-206ENST00000376496 ACADSBP45954 432 aa13.16□□□□□ -0.3
CLCN6-206ENST00000376496 GDF10P55107 478 aa13.16□□□□□ -0.3
CLCN6-206ENST00000376496 CFAP58Q5T655 872 aa13.16□□□□□ -0.3
CLCN6-206ENST00000376496 OTUD1Q5VV17 481 aaPredicted RBP13.16□□□□□ -0.3
CLCN6-206ENST00000376496 SLC39A5Q6ZMH5 540 aa13.16□□□□□ -0.3
CLCN6-206ENST00000376496 TMC3Q7Z5M5 1100 aa13.16□□□□□ -0.3
CLCN6-206ENST00000376496 TMEM173Q86WV6 379 aaPredicted RBP13.16□□□□□ -0.3
CLCN6-206ENST00000376496 SCAMP5Q8TAC9 235 aa13.16□□□□□ -0.3
CLCN6-206ENST00000376496 PGLYRP2Q96PD5 576 aa13.16□□□□□ -0.3
CLCN6-206ENST00000376496 DHX35Q9H5Z1 703 aaKnown RBP13.16□□□□□ -0.3
CLCN6-206ENST00000376496 NRDE2Q9H7Z3 1164 aa13.16□□□□□ -0.3
CLCN6-206ENST00000376496 VIPAS39Q9H9C1 493 aa13.16□□□□□ -0.3
CLCN6-206ENST00000376496 TMEM161AQ9NX61 479 aa13.16□□□□□ -0.3
CLCN6-206ENST00000376496 LCMT1Q9UIC8 334 aa13.16□□□□□ -0.3
CLCN6-206ENST00000376496 FYNP06241 537 aa13.15□□□□□ -0.3
CLCN6-206ENST00000376496 IL4RP24394 825 aa13.15□□□□□ -0.3
CLCN6-206ENST00000376496 IVDP26440 423 aa13.15□□□□□ -0.3
CLCN6-206ENST00000376496 HSPA9P38646 679 aaKnown RBP13.15□□□□□ -0.3
CLCN6-206ENST00000376496 YWHAZP63104 245 aaKnown RBP13.15□□□□□ -0.3
CLCN6-206ENST00000376496 YWHAHQ04917 246 aaPredicted RBP13.15□□□□□ -0.3
CLCN6-206ENST00000376496 SKIDA1Q1XH10 827 aa13.15□□□□□ -0.3
CLCN6-206ENST00000376496 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.15□□□□□ -0.3
CLCN6-206ENST00000376496 ZC3H18Q86VM9 953 aaKnown RBP13.15□□□□□ -0.3
CLCN6-206ENST00000376496 ARL8AQ96BM9 186 aa13.15□□□□□ -0.3
CLCN6-206ENST00000376496 DNAI2Q9GZS0 605 aa13.15□□□□□ -0.3
CLCN6-206ENST00000376496 PLAAQ9Y263 795 aa13.15□□□□□ -0.3
CLCN6-206ENST00000376496 MFHAS1Q9Y4C4 1052 aa13.15□□□□□ -0.3
CLCN6-206ENST00000376496 HHLA1C9JL84 531 aa13.15□□□□□ -0.3
CLCN6-206ENST00000376496 HSF2BPO75031 334 aa13.15□□□□□ -0.3
CLCN6-206ENST00000376496 AMHP03971 560 aa13.15□□□□□ -0.3
CLCN6-206ENST00000376496 CHKAP35790 457 aa13.15□□□□□ -0.3
CLCN6-206ENST00000376496 ITGA8P53708 1063 aa13.15□□□□□ -0.3
CLCN6-206ENST00000376496 ARPP19P56211 112 aa13.15□□□□□ -0.3
CLCN6-206ENST00000376496 SNX16P57768 344 aa13.15□□□□□ -0.3
CLCN6-206ENST00000376496 COPS2P61201 443 aa13.15□□□□□ -0.3
CLCN6-206ENST00000376496 SLC39A12Q504Y0 691 aa13.15□□□□□ -0.3
CLCN6-206ENST00000376496 ZNF365Q70YC5 407 aa13.15□□□□□ -0.3
CLCN6-206ENST00000376496 ZDHHC17Q8IUH5 632 aa13.15□□□□□ -0.3
CLCN6-206ENST00000376496 SEPT8Q92599 483 aa13.15□□□□□ -0.3
CLCN6-206ENST00000376496 CASD1Q96PB1 797 aa13.15□□□□□ -0.3
CLCN6-206ENST00000376496 PKMYT1Q99640 499 aa13.15□□□□□ -0.3
CLCN6-206ENST00000376496 ACBD6Q9BR61 282 aa13.15□□□□□ -0.3
CLCN6-206ENST00000376496 C11orf84Q9BUA3 381 aaPredicted RBP13.15□□□□□ -0.3
CLCN6-206ENST00000376496 DDX23Q9BUQ8 820 aaKnown RBP13.15□□□□□ -0.3
CLCN6-206ENST00000376496 GPR62Q9BZJ7 368 aa13.15□□□□□ -0.3
CLCN6-206ENST00000376496 PCDH18Q9HCL0 1135 aa13.15□□□□□ -0.3
CLCN6-206ENST00000376496 WBP1LQ9NX94 342 aa13.15□□□□□ -0.3
CLCN6-206ENST00000376496 LRFN2Q9ULH4 789 aa13.15□□□□□ -0.3
CLCN6-206ENST00000376496 NEU2Q9Y3R4 380 aa13.15□□□□□ -0.3
CLCN6-206ENST00000376496 SGK1O00141 431 aa13.14□□□□□ -0.31
CLCN6-206ENST00000376496 TADA2AO75478 443 aa13.14□□□□□ -0.31
CLCN6-206ENST00000376496 GAS8O95995 478 aa13.14□□□□□ -0.31
CLCN6-206ENST00000376496 CYP11A1P05108 521 aa13.14□□□□□ -0.31
CLCN6-206ENST00000376496 GPR15P49685 360 aa13.14□□□□□ -0.31
CLCN6-206ENST00000376496 PGFP49763 221 aa13.14□□□□□ -0.31
CLCN6-206ENST00000376496 NNTQ13423 1086 aa13.14□□□□□ -0.31
CLCN6-206ENST00000376496 PTK6Q13882 451 aa13.14□□□□□ -0.31
CLCN6-206ENST00000376496 ACAP1Q15027 740 aa13.14□□□□□ -0.31
CLCN6-206ENST00000376496 EFHC1Q5JVL4 640 aa13.14□□□□□ -0.31
CLCN6-206ENST00000376496 FAM117BQ6P1L5 589 aa13.14□□□□□ -0.31
CLCN6-206ENST00000376496 FAM171BQ6P995 826 aa13.14□□□□□ -0.31
CLCN6-206ENST00000376496 SMARCD1Q96GM5 515 aa13.14□□□□□ -0.31
CLCN6-206ENST00000376496 UROC1Q96N76 676 aa13.14□□□□□ -0.31
CLCN6-206ENST00000376496 FTHL17Q9BXU8 183 aa13.14□□□□□ -0.31
CLCN6-206ENST00000376496 HEY1Q9Y5J3 304 aa13.14□□□□□ -0.31
CLCN6-206ENST00000376496 MRPL42Q9Y6G3 142 aaKnown RBP13.14□□□□□ -0.31
CLCN6-206ENST00000376496 TBKBP1A7MCY6 615 aa13.14□□□□□ -0.31
CLCN6-206ENST00000376496 M0QYT0 321 aa13.14□□□□□ -0.31
CLCN6-206ENST00000376496 RNF40O75150 1001 aa13.14□□□□□ -0.31
CLCN6-206ENST00000376496 ATF2P15336 505 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms