RNA–Protein interactions for RNA: ENST00000375360.7

PTPDC1-202, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-202ENST00000375360 LATS2Q9NRM7 1088 aa18.61■□□□□ 0.57
PTPDC1-202ENST00000375360 TRPM5Q9NZQ8 1165 aa18.61■□□□□ 0.57
PTPDC1-202ENST00000375360 FBXO21O94952 628 aa18.61■□□□□ 0.57
PTPDC1-202ENST00000375360 SLC8A1P32418 973 aa18.61■□□□□ 0.57
PTPDC1-202ENST00000375360 RAB27AP51159 221 aa18.61■□□□□ 0.57
PTPDC1-202ENST00000375360 CNGA2Q16280 664 aa18.61■□□□□ 0.57
PTPDC1-202ENST00000375360 AGBL2Q5U5Z8 902 aa18.61■□□□□ 0.57
PTPDC1-202ENST00000375360 KAT2BQ92831 832 aa18.61■□□□□ 0.57
PTPDC1-202ENST00000375360 MFSD14AQ96MC6 490 aa18.61■□□□□ 0.57
PTPDC1-202ENST00000375360 H3BQF6 201 aa18.61■□□□□ 0.57
PTPDC1-202ENST00000375360 PTPN1P18031 435 aaKnown RBP18.61■□□□□ 0.57
PTPDC1-202ENST00000375360 HNRNPH3P31942 346 aaKnown RBP18.61■□□□□ 0.57
PTPDC1-202ENST00000375360 MAP7Q14244 749 aa18.61■□□□□ 0.57
PTPDC1-202ENST00000375360 NT5DC4Q86YG4 428 aa18.61■□□□□ 0.57
PTPDC1-202ENST00000375360 TMEM139Q8IV31 216 aa18.61■□□□□ 0.57
PTPDC1-202ENST00000375360 ARMC2Q8NEN0 867 aa18.61■□□□□ 0.57
PTPDC1-202ENST00000375360 GIPC2Q8TF65 315 aa18.61■□□□□ 0.57
PTPDC1-202ENST00000375360 SUN2Q9UH99 717 aa18.61■□□□□ 0.57
PTPDC1-202ENST00000375360 HOXA2O43364 376 aa18.61■□□□□ 0.57
PTPDC1-202ENST00000375360 NOL4O94818 638 aa18.61■□□□□ 0.57
PTPDC1-202ENST00000375360 WEE1P30291 646 aa18.61■□□□□ 0.57
PTPDC1-202ENST00000375360 HIRAP54198 1017 aaPredicted RBP18.61■□□□□ 0.57
PTPDC1-202ENST00000375360 RPL10AP62906 217 aaKnown RBP18.61■□□□□ 0.57
PTPDC1-202ENST00000375360 STX3Q13277 289 aa18.61■□□□□ 0.57
PTPDC1-202ENST00000375360 ZCWPW2Q504Y3 356 aa18.61■□□□□ 0.57
PTPDC1-202ENST00000375360 PIGZQ86VD9 579 aa18.61■□□□□ 0.57
PTPDC1-202ENST00000375360 PALB2Q86YC2 1186 aa18.61■□□□□ 0.57
PTPDC1-202ENST00000375360 ZFP42Q96MM3 310 aa18.61■□□□□ 0.57
PTPDC1-202ENST00000375360 TSSK1BQ9BXA7 367 aa18.61■□□□□ 0.57
PTPDC1-202ENST00000375360 ARHGAP28Q9P2N2 729 aa18.61■□□□□ 0.57
PTPDC1-202ENST00000375360 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.6■□□□□ 0.57
PTPDC1-202ENST00000375360 TTC4O95801 387 aa18.6■□□□□ 0.57
PTPDC1-202ENST00000375360 RPLP2P05387 115 aaKnown RBP18.6■□□□□ 0.57
PTPDC1-202ENST00000375360 GEMIN4P57678 1058 aaKnown RBP18.6■□□□□ 0.57
PTPDC1-202ENST00000375360 MRPS6P82932 125 aaKnown RBP18.6■□□□□ 0.57
PTPDC1-202ENST00000375360 KDSRQ06136 332 aa18.6■□□□□ 0.57
PTPDC1-202ENST00000375360 DDIASQ8IXT1 998 aa18.6■□□□□ 0.57
PTPDC1-202ENST00000375360 LRRN4Q8WUT4 740 aa18.6■□□□□ 0.57
PTPDC1-202ENST00000375360 CCDC124Q96CT7 223 aaKnown RBP18.6■□□□□ 0.57
PTPDC1-202ENST00000375360 TUBB6Q9BUF5 446 aa18.6■□□□□ 0.57
PTPDC1-202ENST00000375360 GPR63Q9BZJ6 419 aa18.6■□□□□ 0.57
PTPDC1-202ENST00000375360 KANSL3Q9P2N6 904 aa18.6■□□□□ 0.57
PTPDC1-202ENST00000375360 F5H5T6 163 aa18.6■□□□□ 0.57
PTPDC1-202ENST00000375360 OPHN1O60890 802 aa18.6■□□□□ 0.57
PTPDC1-202ENST00000375360 NOL3O60936 208 aaKnown RBP18.6■□□□□ 0.57
PTPDC1-202ENST00000375360 UGP2Q16851 508 aa18.6■□□□□ 0.57
PTPDC1-202ENST00000375360 MRPS31Q92665 395 aaKnown RBP18.6■□□□□ 0.57
PTPDC1-202ENST00000375360 SGSM3Q96HU1 749 aa18.6■□□□□ 0.57
PTPDC1-202ENST00000375360 EPS15L1Q9UBC2 864 aa18.6■□□□□ 0.57
PTPDC1-202ENST00000375360 PRUNE1Q86TP1 453 aa18.6■□□□□ 0.57
PTPDC1-202ENST00000375360 YAF2Q8IY57 180 aa18.6■□□□□ 0.57
PTPDC1-202ENST00000375360 ARHGAP18Q8N392 663 aa18.6■□□□□ 0.57
PTPDC1-202ENST00000375360 FAM111AQ96PZ2 611 aa18.6■□□□□ 0.57
PTPDC1-202ENST00000375360 ATXN3LQ9H3M9 355 aa18.6■□□□□ 0.57
PTPDC1-202ENST00000375360 DYRK4Q9NR20 520 aa18.6■□□□□ 0.57
PTPDC1-202ENST00000375360 OLA1Q9NTK5 396 aaKnown RBP18.6■□□□□ 0.57
PTPDC1-202ENST00000375360 WHRNQ9P202 907 aa18.6■□□□□ 0.57
PTPDC1-202ENST00000375360 UMODL1Q5DID0 1318 aa18.59■□□□□ 0.57
PTPDC1-202ENST00000375360 PRRC2BQ5JSZ5 2229 aaKnown RBP18.59■□□□□ 0.57
PTPDC1-202ENST00000375360 H7C4K7 107 aa18.59■□□□□ 0.57
PTPDC1-202ENST00000375360 MMP3P08254 477 aa18.59■□□□□ 0.57
PTPDC1-202ENST00000375360 ST8SIA6P61647 398 aa18.59■□□□□ 0.57
PTPDC1-202ENST00000375360 PDAP1Q13442 181 aaKnown RBP18.59■□□□□ 0.57
PTPDC1-202ENST00000375360 ANGPTL8Q6UXH0 198 aa18.59■□□□□ 0.57
PTPDC1-202ENST00000375360 PCDHB18PQ96TA0 734 aa18.59■□□□□ 0.57
PTPDC1-202ENST00000375360 TXNRD2Q9NNW7 524 aa18.59■□□□□ 0.57
PTPDC1-202ENST00000375360 DMAP1Q9NPF5 467 aaPredicted RBP18.59■□□□□ 0.57
PTPDC1-202ENST00000375360 PCDHB5Q9Y5E4 795 aa18.59■□□□□ 0.57
PTPDC1-202ENST00000375360 A0A0G2JLL6 359 aaPredicted RBP18.59■□□□□ 0.57
PTPDC1-202ENST00000375360 CLDN5O00501 218 aa18.59■□□□□ 0.57
PTPDC1-202ENST00000375360 TPH1P17752 444 aa18.59■□□□□ 0.57
PTPDC1-202ENST00000375360 CSE1LP55060 971 aaKnown RBP18.59■□□□□ 0.57
PTPDC1-202ENST00000375360 PRRT2Q7Z6L0 340 aaPredicted RBP18.59■□□□□ 0.57
PTPDC1-202ENST00000375360 DAW1Q8N136 415 aa18.59■□□□□ 0.57
PTPDC1-202ENST00000375360 SMARCD1Q96GM5 515 aa18.59■□□□□ 0.57
PTPDC1-202ENST00000375360 MAML3Q96JK9 1138 aa18.59■□□□□ 0.57
PTPDC1-202ENST00000375360 TRPV6Q9H1D0 765 aa18.59■□□□□ 0.57
PTPDC1-202ENST00000375360 AAASQ9NRG9 546 aa18.59■□□□□ 0.57
PTPDC1-202ENST00000375360 LRRC37A3O60309 1634 aa18.59■□□□□ 0.57
PTPDC1-202ENST00000375360 GPR25O00155 361 aa18.59■□□□□ 0.57
PTPDC1-202ENST00000375360 ASMTLO95671 621 aa18.59■□□□□ 0.57
PTPDC1-202ENST00000375360 SSTR1P30872 391 aa18.59■□□□□ 0.57
PTPDC1-202ENST00000375360 AKT1P31749 480 aa18.59■□□□□ 0.57
PTPDC1-202ENST00000375360 COLGALT1Q8NBJ5 622 aa18.59■□□□□ 0.57
PTPDC1-202ENST00000375360 RBM22Q9NW64 420 aaKnown RBP eCLIP18.59■□□□□ 0.57
PTPDC1-202ENST00000375360 SPAG6O75602 509 aa18.59■□□□□ 0.57
PTPDC1-202ENST00000375360 PECAM1P16284 738 aaPredicted RBP18.59■□□□□ 0.57
PTPDC1-202ENST00000375360 CCR1P32246 355 aa18.59■□□□□ 0.57
PTPDC1-202ENST00000375360 ALDH18A1P54886 795 aaKnown RBP18.59■□□□□ 0.57
PTPDC1-202ENST00000375360 MARSP56192 900 aaKnown RBP18.59■□□□□ 0.57
PTPDC1-202ENST00000375360 NOMO3P69849 1222 aa18.59■□□□□ 0.57
PTPDC1-202ENST00000375360 OVGP1Q12889 678 aa18.59■□□□□ 0.57
PTPDC1-202ENST00000375360 C12orf42Q96LP6 360 aa18.59■□□□□ 0.57
PTPDC1-202ENST00000375360 NT5C1B-RDH14C9J2C7 533 aa18.58■□□□□ 0.57
PTPDC1-202ENST00000375360 SPTLC1O15269 473 aa18.58■□□□□ 0.57
PTPDC1-202ENST00000375360 USP12O75317 370 aa18.58■□□□□ 0.57
PTPDC1-202ENST00000375360 MORF4L2Q15014 288 aa18.58■□□□□ 0.57
PTPDC1-202ENST00000375360 THEMIS2Q5TEJ8 643 aa18.58■□□□□ 0.57
PTPDC1-202ENST00000375360 KCNT2Q6UVM3 1135 aa18.58■□□□□ 0.57
PTPDC1-202ENST00000375360 NETO2Q8NC67 525 aa18.58■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms