RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 HBS1LQ9Y450 684 aaKnown RBP10.51□□□□□ -0.73
PTCH1-204ENST00000375290 NCANO14594 1321 aa10.51□□□□□ -0.73
PTCH1-204ENST00000375290 EEF2KO00418 725 aaKnown RBP10.51□□□□□ -0.73
PTCH1-204ENST00000375290 SLC26A2P50443 739 aa10.51□□□□□ -0.73
PTCH1-204ENST00000375290 MGAT5Q09328 741 aa10.51□□□□□ -0.73
PTCH1-204ENST00000375290 SLC27A3Q5K4L6 730 aa10.51□□□□□ -0.73
PTCH1-204ENST00000375290 KRT74Q7RTS7 529 aa10.51□□□□□ -0.73
PTCH1-204ENST00000375290 HELQQ8TDG4 1101 aa10.51□□□□□ -0.73
PTCH1-204ENST00000375290 TINF2Q9BSI4 451 aa10.51□□□□□ -0.73
PTCH1-204ENST00000375290 APOC4-APOC2K7ER74 178 aa10.51□□□□□ -0.73
PTCH1-204ENST00000375290 TDP2O95551 362 aa10.51□□□□□ -0.73
PTCH1-204ENST00000375290 APOC2P02655 101 aa10.51□□□□□ -0.73
PTCH1-204ENST00000375290 CYP11B1P15538 503 aa10.51□□□□□ -0.73
PTCH1-204ENST00000375290 NUP62P37198 522 aaPredicted RBP10.51□□□□□ -0.73
PTCH1-204ENST00000375290 PPP4CP60510 307 aa10.51□□□□□ -0.73
PTCH1-204ENST00000375290 BROXQ5VW32 411 aa10.51□□□□□ -0.73
PTCH1-204ENST00000375290 METTL21CQ5VZV1 264 aa10.51□□□□□ -0.73
PTCH1-204ENST00000375290 NT5DC3Q86UY8 548 aa10.51□□□□□ -0.73
PTCH1-204ENST00000375290 GALNT4Q8N4A0 578 aa10.51□□□□□ -0.73
PTCH1-204ENST00000375290 RBM46Q8TBY0 533 aaKnown RBP10.51□□□□□ -0.73
PTCH1-204ENST00000375290 TRMOQ9BU70 441 aa10.51□□□□□ -0.73
PTCH1-204ENST00000375290 ACAD9Q9H845 621 aa10.51□□□□□ -0.73
PTCH1-204ENST00000375290 PLK2Q9NYY3 685 aa10.51□□□□□ -0.73
PTCH1-204ENST00000375290 PHGDHO43175 533 aaKnown RBP10.51□□□□□ -0.73
PTCH1-204ENST00000375290 ENTPD3O75355 529 aa10.51□□□□□ -0.73
PTCH1-204ENST00000375290 BLMHQ13867 455 aa10.51□□□□□ -0.73
PTCH1-204ENST00000375290 TMEM63BQ5T3F8 832 aa10.51□□□□□ -0.73
PTCH1-204ENST00000375290 FAM45AQ8TCE6 357 aa10.51□□□□□ -0.73
PTCH1-204ENST00000375290 THAP2Q9H0W7 228 aa10.51□□□□□ -0.73
PTCH1-204ENST00000375290 TRHDEQ9UKU6 1024 aa10.51□□□□□ -0.73
PTCH1-204ENST00000375290 ZBTB1Q9Y2K1 713 aa10.51□□□□□ -0.73
PTCH1-204ENST00000375290 BBIP1A8MTZ0 92 aa10.51□□□□□ -0.73
PTCH1-204ENST00000375290 ZNF862O60290 1169 aa10.51□□□□□ -0.73
PTCH1-204ENST00000375290 CPA3P15088 417 aa10.51□□□□□ -0.73
PTCH1-204ENST00000375290 OGNP20774 298 aaKnown RBP10.51□□□□□ -0.73
PTCH1-204ENST00000375290 EIF2B2P49770 351 aaKnown RBP10.51□□□□□ -0.73
PTCH1-204ENST00000375290 LRRC36Q1X8D7 754 aa10.51□□□□□ -0.73
PTCH1-204ENST00000375290 ZDHHC13Q8IUH4 622 aa10.51□□□□□ -0.73
PTCH1-204ENST00000375290 OTUD5Q96G74 571 aa10.51□□□□□ -0.73
PTCH1-204ENST00000375290 SPAG4Q9NPE6 437 aa10.51□□□□□ -0.73
PTCH1-204ENST00000375290 FRMPD4Q14CM0 1322 aa10.51□□□□□ -0.73
PTCH1-204ENST00000375290 MAGEC1O60732 1142 aa10.51□□□□□ -0.73
PTCH1-204ENST00000375290 PGAM1P18669 254 aa10.51□□□□□ -0.73
PTCH1-204ENST00000375290 BICRALQ6AI39 1079 aa10.51□□□□□ -0.73
PTCH1-204ENST00000375290 SULF1Q8IWU6 871 aa10.51□□□□□ -0.73
PTCH1-204ENST00000375290 AGLP35573 1532 aa10.51□□□□□ -0.73
PTCH1-204ENST00000375290 SEC24DO94855 1032 aaPredicted RBP10.51□□□□□ -0.73
PTCH1-204ENST00000375290 PAX7P23759 505 aa10.51□□□□□ -0.73
PTCH1-204ENST00000375290 SH3RF1Q7Z6J0 888 aa10.51□□□□□ -0.73
PTCH1-204ENST00000375290 OTULINQ96BN8 352 aa10.51□□□□□ -0.73
PTCH1-204ENST00000375290 PTTG2Q9NZH5 202 aa10.51□□□□□ -0.73
PTCH1-204ENST00000375290 MFHAS1Q9Y4C4 1052 aa10.51□□□□□ -0.73
PTCH1-204ENST00000375290 F5H6K3 240 aa10.5□□□□□ -0.73
PTCH1-204ENST00000375290 NDUFS3O75489 264 aa10.5□□□□□ -0.73
PTCH1-204ENST00000375290 LCA5LO95447 670 aa10.5□□□□□ -0.73
PTCH1-204ENST00000375290 EIF4BP23588 611 aaKnown RBP10.5□□□□□ -0.73
PTCH1-204ENST00000375290 KLRC3Q07444 240 aa10.5□□□□□ -0.73
PTCH1-204ENST00000375290 C11orf88Q6PI97 169 aa10.5□□□□□ -0.73
PTCH1-204ENST00000375290 CYP4Z2PQ8N1L4 340 aa10.5□□□□□ -0.73
PTCH1-204ENST00000375290 APPL2Q8NEU8 664 aa10.5□□□□□ -0.73
PTCH1-204ENST00000375290 ADCY4Q8NFM4 1077 aa10.5□□□□□ -0.73
PTCH1-204ENST00000375290 USP33Q8TEY7 942 aa10.5□□□□□ -0.73
PTCH1-204ENST00000375290 ATP8B4Q8TF62 1192 aa10.5□□□□□ -0.73
PTCH1-204ENST00000375290 MTERF3Q96E29 417 aa10.5□□□□□ -0.73
PTCH1-204ENST00000375290 MCRS1Q96EZ8 462 aa10.5□□□□□ -0.73
PTCH1-204ENST00000375290 Q96MT0 163 aa10.5□□□□□ -0.73
PTCH1-204ENST00000375290 OSBPL6Q9BZF3 934 aa10.5□□□□□ -0.73
PTCH1-204ENST00000375290 ARHGAP20Q9P2F6 1191 aa10.5□□□□□ -0.73
PTCH1-204ENST00000375290 COL3A1P02461 1466 aaPredicted RBP10.5□□□□□ -0.73
PTCH1-204ENST00000375290 hCG_2014768A0A024R1R8 64 aa10.5□□□□□ -0.73
PTCH1-204ENST00000375290 ZBTB22O15209 634 aa10.5□□□□□ -0.73
PTCH1-204ENST00000375290 RECQL5O94762 991 aaPredicted RBP10.5□□□□□ -0.73
PTCH1-204ENST00000375290 GEMP55040 296 aa10.5□□□□□ -0.73
PTCH1-204ENST00000375290 SF3B3Q15393 1217 aaKnown RBP10.5□□□□□ -0.73
PTCH1-204ENST00000375290 DEFB107AQ8IZN7 70 aa10.5□□□□□ -0.73
PTCH1-204ENST00000375290 CLK4Q9HAZ1 481 aaKnown RBP10.5□□□□□ -0.73
PTCH1-204ENST00000375290 UBP1Q9NZI7 540 aa10.5□□□□□ -0.73
PTCH1-204ENST00000375290 ADGRB1O14514 1584 aa10.5□□□□□ -0.73
PTCH1-204ENST00000375290 USP17L15C9J2P7 530 aa10.5□□□□□ -0.73
PTCH1-204ENST00000375290 USP17L13C9JLJ4 530 aa10.5□□□□□ -0.73
PTCH1-204ENST00000375290 USP17L11C9JVI0 530 aa10.5□□□□□ -0.73
PTCH1-204ENST00000375290 USP17L18D6R9N7 530 aa10.5□□□□□ -0.73
PTCH1-204ENST00000375290 USP17L22D6RA61 530 aa10.5□□□□□ -0.73
PTCH1-204ENST00000375290 USP17L17D6RBQ6 530 aa10.5□□□□□ -0.73
PTCH1-204ENST00000375290 USP17L19D6RCP7 530 aa10.5□□□□□ -0.73
PTCH1-204ENST00000375290 USP17L20D6RJB6 530 aa10.5□□□□□ -0.73
PTCH1-204ENST00000375290 LDLRP01130 860 aa10.5□□□□□ -0.73
PTCH1-204ENST00000375290 PDHBP11177 359 aa10.5□□□□□ -0.73
PTCH1-204ENST00000375290 NPR3P17342 541 aa10.5□□□□□ -0.73
PTCH1-204ENST00000375290 GP5P40197 560 aa10.5□□□□□ -0.73
PTCH1-204ENST00000375290 USP17L24Q0WX57 530 aa10.5□□□□□ -0.73
PTCH1-204ENST00000375290 USP17L6PQ6QN14 398 aa10.5□□□□□ -0.73
PTCH1-204ENST00000375290 TSPAN14Q8NG11 270 aa10.5□□□□□ -0.73
PTCH1-204ENST00000375290 DYRK4Q9NR20 520 aa10.5□□□□□ -0.73
PTCH1-204ENST00000375290 ZNF446Q9NWS9 450 aa10.5□□□□□ -0.73
PTCH1-204ENST00000375290 SYNJ2BP-COX16A0A087WUM0 186 aa10.5□□□□□ -0.73
PTCH1-204ENST00000375290 CCDC154A6NI56 674 aa10.5□□□□□ -0.73
PTCH1-204ENST00000375290 PRDX6P30041 224 aa10.5□□□□□ -0.73
PTCH1-204ENST00000375290 SPIDRQ14159 915 aa10.5□□□□□ -0.73
PTCH1-204ENST00000375290 PCBP1Q15365 356 aaKnown RBP eCLIP10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms