RNA–Protein interactions for RNA: ENST00000375218.3

UBR4-201, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 4,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-201ENST00000375218 ZFP57Q9NU63 452 aa9.41□□□□□ -0.9
UBR4-201ENST00000375218 ANAPC5Q9UJX4 755 aa9.41□□□□□ -0.9
UBR4-201ENST00000375218 MUC3AQ02505 3323 aa9.41□□□□□ -0.9
UBR4-201ENST00000375218 SPATA31A6Q5VVP1 1343 aa9.41□□□□□ -0.9
UBR4-201ENST00000375218 CAPN8A6NHC0 703 aa9.41□□□□□ -0.9
UBR4-201ENST00000375218 ZNF891A8MT65 544 aaPredicted RBP9.41□□□□□ -0.9
UBR4-201ENST00000375218 SMAD9O15198 467 aaKnown RBP9.41□□□□□ -0.9
UBR4-201ENST00000375218 ALOX5P09917 674 aa9.41□□□□□ -0.9
UBR4-201ENST00000375218 PABPC4LP0CB38 370 aaKnown RBP9.41□□□□□ -0.9
UBR4-201ENST00000375218 RAG1P15918 1043 aa9.41□□□□□ -0.9
UBR4-201ENST00000375218 MCAMP43121 646 aa9.41□□□□□ -0.9
UBR4-201ENST00000375218 DMC1Q14565 340 aa9.41□□□□□ -0.9
UBR4-201ENST00000375218 THEMIS2Q5TEJ8 643 aa9.41□□□□□ -0.9
UBR4-201ENST00000375218 GK5Q6ZS86 529 aa9.41□□□□□ -0.9
UBR4-201ENST00000375218 RDH13Q8NBN7 331 aa9.41□□□□□ -0.9
UBR4-201ENST00000375218 SIPA1Q96FS4 1042 aa9.41□□□□□ -0.9
UBR4-201ENST00000375218 KCNF1Q9H3M0 494 aa9.41□□□□□ -0.9
UBR4-201ENST00000375218 NOL6Q9H6R4 1146 aaKnown RBP9.41□□□□□ -0.9
UBR4-201ENST00000375218 DDX28Q9NUL7 540 aaKnown RBP9.41□□□□□ -0.9
UBR4-201ENST00000375218 TMOD3Q9NYL9 352 aa9.41□□□□□ -0.9
UBR4-201ENST00000375218 CLEC11AQ9Y240 323 aa9.41□□□□□ -0.9
UBR4-201ENST00000375218 SNX9Q9Y5X1 595 aa9.41□□□□□ -0.9
UBR4-201ENST00000375218 A0A087X0M5 115 aa9.41□□□□□ -0.9
UBR4-201ENST00000375218 A0A1B0GX30 115 aa9.41□□□□□ -0.9
UBR4-201ENST00000375218 BLACEA4D250 179 aa9.41□□□□□ -0.9
UBR4-201ENST00000375218 CIDEAO60543 219 aa9.41□□□□□ -0.9
UBR4-201ENST00000375218 SLC2A7Q6PXP3 512 aa9.41□□□□□ -0.9
UBR4-201ENST00000375218 C6orf89Q6UWU4 347 aa9.41□□□□□ -0.9
UBR4-201ENST00000375218 ARMCX2Q7L311 632 aa9.41□□□□□ -0.9
UBR4-201ENST00000375218 SPDL1Q96EA4 605 aa9.41□□□□□ -0.9
UBR4-201ENST00000375218 DTNBP1Q96EV8 351 aa9.41□□□□□ -0.9
UBR4-201ENST00000375218 RPGRIP1Q96KN7 1286 aa9.41□□□□□ -0.9
UBR4-201ENST00000375218 GBP5Q96PP8 586 aa9.41□□□□□ -0.9
UBR4-201ENST00000375218 RNF38Q9H0F5 515 aa9.41□□□□□ -0.9
UBR4-201ENST00000375218 SPACA1Q9HBV2 294 aa9.41□□□□□ -0.9
UBR4-201ENST00000375218 MRM3Q9HC36 420 aaKnown RBP9.41□□□□□ -0.9
UBR4-201ENST00000375218 PNPLA8Q9NP80 782 aa9.41□□□□□ -0.9
UBR4-201ENST00000375218 C14orf119Q9NWQ9 140 aa9.41□□□□□ -0.9
UBR4-201ENST00000375218 TRIM43BA6NCK2 446 aa9.4□□□□□ -0.9
UBR4-201ENST00000375218 EXOC3O60645 756 aa9.4□□□□□ -0.9
UBR4-201ENST00000375218 SSTP61278 116 aa9.4□□□□□ -0.9
UBR4-201ENST00000375218 KCNJ10P78508 379 aa9.4□□□□□ -0.9
UBR4-201ENST00000375218 CTXN3Q4LDR2 81 aa9.4□□□□□ -0.9
UBR4-201ENST00000375218 TAF2Q6P1X5 1199 aa9.4□□□□□ -0.9
UBR4-201ENST00000375218 AKAP14Q86UN6 197 aa9.4□□□□□ -0.9
UBR4-201ENST00000375218 TUSC5Q8IXB3 177 aa9.4□□□□□ -0.9
UBR4-201ENST00000375218 ABHD8Q96I13 439 aa9.4□□□□□ -0.9
UBR4-201ENST00000375218 JPH2Q9BR39 696 aaPredicted RBP9.4□□□□□ -0.9
UBR4-201ENST00000375218 LGR4Q9BXB1 951 aa9.4□□□□□ -0.9
UBR4-201ENST00000375218 MKNK2Q9HBH9 465 aa9.4□□□□□ -0.9
UBR4-201ENST00000375218 MRPL47Q9HD33 250 aaKnown RBP9.4□□□□□ -0.9
UBR4-201ENST00000375218 SLC8A2Q9UPR5 921 aa9.4□□□□□ -0.9
UBR4-201ENST00000375218 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.4□□□□□ -0.93e-9■■□□□ 13.1
UBR4-201ENST00000375218 SPOPO43791 374 aa9.4□□□□□ -0.9
UBR4-201ENST00000375218 SOAT2O75908 522 aa9.4□□□□□ -0.9
UBR4-201ENST00000375218 SOD2P04179 222 aa9.4□□□□□ -0.9
UBR4-201ENST00000375218 BCRP11274 1271 aa9.4□□□□□ -0.9
UBR4-201ENST00000375218 GPTP24298 496 aa9.4□□□□□ -0.9
UBR4-201ENST00000375218 CIITAP33076 1130 aa9.4□□□□□ -0.9
UBR4-201ENST00000375218 MFAP3P55082 362 aa9.4□□□□□ -0.9
UBR4-201ENST00000375218 CASP9P55211 416 aa9.4□□□□□ -0.9
UBR4-201ENST00000375218 DSC2Q02487 901 aa9.4□□□□□ -0.9
UBR4-201ENST00000375218 CYP2A13Q16696 494 aa9.4□□□□□ -0.9
UBR4-201ENST00000375218 SLC25A24Q6NUK1 477 aa9.4□□□□□ -0.9
UBR4-201ENST00000375218 WDR93Q6P2C0 686 aa9.4□□□□□ -0.9
UBR4-201ENST00000375218 ANKFN1Q8N957 763 aa9.4□□□□□ -0.9
UBR4-201ENST00000375218 ASZ1Q8WWH4 475 aa9.4□□□□□ -0.9
UBR4-201ENST00000375218 SLC9A6Q92581 669 aa9.4□□□□□ -0.9
UBR4-201ENST00000375218 FAM107BQ9H098 131 aa9.4□□□□□ -0.9
UBR4-201ENST00000375218 INTS2Q9H0H0 1204 aaKnown RBP9.4□□□□□ -0.9
UBR4-201ENST00000375218 UNC93B1Q9H1C4 597 aa9.4□□□□□ -0.9
UBR4-201ENST00000375218 TFB2MQ9H5Q4 396 aaKnown RBP9.4□□□□□ -0.9
UBR4-201ENST00000375218 EIF2B3Q9NR50 452 aaKnown RBP9.4□□□□□ -0.9
UBR4-201ENST00000375218 USP40Q9NVE5 1235 aa9.4□□□□□ -0.9
UBR4-201ENST00000375218 PCDHB10Q9UN67 800 aa9.4□□□□□ -0.9
UBR4-201ENST00000375218 A0A0G2JS52 829 aa9.4□□□□□ -0.9
UBR4-201ENST00000375218 LOC105371267A0A1B0GV96 52 aa9.4□□□□□ -0.9
UBR4-201ENST00000375218 PITPNM1O00562 1244 aa9.4□□□□□ -0.9
UBR4-201ENST00000375218 ACKR2O00590 384 aa9.4□□□□□ -0.9
UBR4-201ENST00000375218 CAMLGP49069 296 aa9.4□□□□□ -0.9
UBR4-201ENST00000375218 POU3F4P49335 361 aa9.4□□□□□ -0.9
UBR4-201ENST00000375218 FAM189BP81408 668 aa9.4□□□□□ -0.9
UBR4-201ENST00000375218 RCN2Q14257 317 aa9.4□□□□□ -0.9
UBR4-201ENST00000375218 ZMYND11Q15326 602 aa9.4□□□□□ -0.9
UBR4-201ENST00000375218 MOGQ16653 247 aa9.4□□□□□ -0.9
UBR4-201ENST00000375218 TUSC1Q2TAM9 212 aa9.4□□□□□ -0.9
UBR4-201ENST00000375218 BEND6Q5SZJ8 279 aaPredicted RBP9.4□□□□□ -0.9
UBR4-201ENST00000375218 WDR49Q8IV35 697 aa9.4□□□□□ -0.9
UBR4-201ENST00000375218 USP21Q9UK80 565 aa9.4□□□□□ -0.9
UBR4-201ENST00000375218 CDHR2Q9BYE9 1310 aa9.4□□□□□ -0.91
UBR4-201ENST00000375218 M0R2N6 131 aa9.4□□□□□ -0.91
UBR4-201ENST00000375218 TRAPPC3O43617 180 aa9.4□□□□□ -0.91
UBR4-201ENST00000375218 GUCY1B2O75343 617 aa9.4□□□□□ -0.91
UBR4-201ENST00000375218 HEXIM1O94992 359 aaKnown RBP9.4□□□□□ -0.91
UBR4-201ENST00000375218 PTBP3O95758 552 aaKnown RBP9.4□□□□□ -0.91
UBR4-201ENST00000375218 IL32P24001 234 aa9.4□□□□□ -0.91
UBR4-201ENST00000375218 CCR9P51686 369 aa9.4□□□□□ -0.91
UBR4-201ENST00000375218 INHBCP55103 352 aa9.4□□□□□ -0.91
UBR4-201ENST00000375218 DDR1Q08345 913 aa9.4□□□□□ -0.91
UBR4-201ENST00000375218 KCNAB2Q13303 367 aa9.4□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms