RNA–Protein interactions for RNA: ENST00000374490.7

HMGCL-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCL, Length 1,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-203ENST00000374490 COPS5Q92905 334 aa14.54□□□□□ -0.08
HMGCL-203ENST00000374490 MAML3Q96JK9 1138 aa14.54□□□□□ -0.08
HMGCL-203ENST00000374490 RMDN2Q96LZ7 410 aa14.54□□□□□ -0.08
HMGCL-203ENST00000374490 TBCBQ99426 244 aa14.54□□□□□ -0.08
HMGCL-203ENST00000374490 PAFAH2Q99487 392 aa14.54□□□□□ -0.08
HMGCL-203ENST00000374490 NT5C1AQ9BXI3 368 aa14.54□□□□□ -0.08
HMGCL-203ENST00000374490 CALN1Q9BXU9 219 aa14.54□□□□□ -0.08
HMGCL-203ENST00000374490 PCSK1NQ9UHG2 260 aa14.54□□□□□ -0.08
HMGCL-203ENST00000374490 BAIAP2L1Q9UHR4 511 aa14.54□□□□□ -0.08
HMGCL-203ENST00000374490 DERAQ9Y315 318 aa14.54□□□□□ -0.08
HMGCL-203ENST00000374490 ZSWIM8A7E2V4 1837 aa14.54□□□□□ -0.08
HMGCL-203ENST00000374490 C2CD4BA6NLJ0 364 aa14.53□□□□□ -0.08
HMGCL-203ENST00000374490 GOLGA8MH3BSY2 632 aa14.53□□□□□ -0.08
HMGCL-203ENST00000374490 HNRNPCL1O60812 293 aaKnown RBP14.53□□□□□ -0.08
HMGCL-203ENST00000374490 WFS1O76024 890 aa14.53□□□□□ -0.08
HMGCL-203ENST00000374490 LGALS2P05162 132 aa14.53□□□□□ -0.08
HMGCL-203ENST00000374490 GJB1P08034 283 aa14.53□□□□□ -0.08
HMGCL-203ENST00000374490 GSTA2P09210 222 aa14.53□□□□□ -0.08
HMGCL-203ENST00000374490 INSRRP14616 1297 aa14.53□□□□□ -0.08
HMGCL-203ENST00000374490 RPA3P35244 121 aaPredicted RBP14.53□□□□□ -0.08
HMGCL-203ENST00000374490 CDH6P55285 790 aa14.53□□□□□ -0.08
HMGCL-203ENST00000374490 BASP1P80723 227 aaKnown RBP14.53□□□□□ -0.08
HMGCL-203ENST00000374490 PRKCZQ05513 592 aa14.53□□□□□ -0.08
HMGCL-203ENST00000374490 ADCY1Q08828 1119 aa14.53□□□□□ -0.08
HMGCL-203ENST00000374490 DNAJC3Q13217 504 aa14.53□□□□□ -0.08
HMGCL-203ENST00000374490 KRT81Q14533 505 aa14.53□□□□□ -0.08
HMGCL-203ENST00000374490 PARP6Q2NL67 630 aa14.53□□□□□ -0.08
HMGCL-203ENST00000374490 OR6B2Q6IFH4 312 aa14.53□□□□□ -0.08
HMGCL-203ENST00000374490 TAPT1Q6NXT6 567 aa14.53□□□□□ -0.08
HMGCL-203ENST00000374490 CAPN12Q6ZSI9 719 aa14.53□□□□□ -0.08
HMGCL-203ENST00000374490 SLAIN1Q8ND83 568 aa14.53□□□□□ -0.08
HMGCL-203ENST00000374490 RXFP2Q8WXD0 754 aa14.53□□□□□ -0.08
HMGCL-203ENST00000374490 APBB2Q92870 758 aa14.53□□□□□ -0.08
HMGCL-203ENST00000374490 RTP4Q96DX8 246 aa14.53□□□□□ -0.08
HMGCL-203ENST00000374490 ACAP3Q96P50 834 aa14.53□□□□□ -0.08
HMGCL-203ENST00000374490 TINF2Q9BSI4 451 aa14.53□□□□□ -0.08
HMGCL-203ENST00000374490 RNF208Q9H0X6 261 aa14.53□□□□□ -0.08
HMGCL-203ENST00000374490 RBM47A0AV96 593 aaKnown RBP14.52□□□□□ -0.08
HMGCL-203ENST00000374490 TMEM63AO94886 807 aa14.52□□□□□ -0.08
HMGCL-203ENST00000374490 TROVE2P10155 538 aaKnown RBP eCLIP14.52□□□□□ -0.08
HMGCL-203ENST00000374490 CCL5P13501 91 aa14.52□□□□□ -0.08
HMGCL-203ENST00000374490 PDGFRAP16234 1089 aa14.52□□□□□ -0.08
HMGCL-203ENST00000374490 KRT4P19013 534 aa14.52□□□□□ -0.08
HMGCL-203ENST00000374490 GJA8P48165 433 aa14.52□□□□□ -0.08
HMGCL-203ENST00000374490 RASSF2P50749 326 aa14.52□□□□□ -0.08
HMGCL-203ENST00000374490 NDST1P52848 882 aa14.52□□□□□ -0.08
HMGCL-203ENST00000374490 ARHGAP1Q07960 439 aa14.52□□□□□ -0.08
HMGCL-203ENST00000374490 PDE4CQ08493 712 aa14.52□□□□□ -0.08
HMGCL-203ENST00000374490 KCNJ11Q14654 390 aa14.52□□□□□ -0.08
HMGCL-203ENST00000374490 SLC1A5Q15758 541 aa14.52□□□□□ -0.08
HMGCL-203ENST00000374490 SLC10A6Q3KNW5 377 aa14.52□□□□□ -0.08
HMGCL-203ENST00000374490 DCAF4L1Q3SXM0 396 aa14.52□□□□□ -0.08
HMGCL-203ENST00000374490 HP1BP3Q5SSJ5 553 aaPredicted RBP14.52□□□□□ -0.08
HMGCL-203ENST00000374490 LVRNQ6Q4G3 990 aa14.52□□□□□ -0.08
HMGCL-203ENST00000374490 CDR2LQ86X02 465 aaPredicted RBP14.52□□□□□ -0.08
HMGCL-203ENST00000374490 ZDHHC17Q8IUH5 632 aa14.52□□□□□ -0.08
HMGCL-203ENST00000374490 AGGF1Q8N302 714 aaeCLIP14.52□□□□□ -0.08
HMGCL-203ENST00000374490 FAM71DQ8N9W8 422 aa14.52□□□□□ -0.08
HMGCL-203ENST00000374490 MZB1Q8WU39 189 aa14.52□□□□□ -0.08
HMGCL-203ENST00000374490 DCAKDQ8WVC6 231 aa14.52□□□□□ -0.08
HMGCL-203ENST00000374490 INPP5DQ92835 1189 aa14.52□□□□□ -0.08
HMGCL-203ENST00000374490 EMID1Q96A84 441 aaPredicted RBP14.52□□□□□ -0.08
HMGCL-203ENST00000374490 RNF157Q96PX1 679 aa14.52□□□□□ -0.08
HMGCL-203ENST00000374490 HTATIP2Q9BUP3 242 aa14.52□□□□□ -0.08
HMGCL-203ENST00000374490 VPS11Q9H270 941 aa14.52□□□□□ -0.08
HMGCL-203ENST00000374490 ABHD16BQ9H3Z7 469 aa14.52□□□□□ -0.08
HMGCL-203ENST00000374490 KIF9Q9HAQ2 790 aa14.52□□□□□ -0.08
HMGCL-203ENST00000374490 PLEKHA5Q9HAU0 1116 aa14.52□□□□□ -0.08
HMGCL-203ENST00000374490 PNPLA8Q9NP80 782 aa14.52□□□□□ -0.08
HMGCL-203ENST00000374490 DPP3Q9NY33 737 aa14.52□□□□□ -0.08
HMGCL-203ENST00000374490 HMGXB4Q9UGU5 601 aa14.52□□□□□ -0.08
HMGCL-203ENST00000374490 AKT3Q9Y243 479 aa14.52□□□□□ -0.08
HMGCL-203ENST00000374490 IKBKGQ9Y6K9 419 aa14.52□□□□□ -0.08
HMGCL-203ENST00000374490 ANK1P16157 1881 aa14.52□□□□□ -0.08
HMGCL-203ENST00000374490 CENPFP49454 3210 aa14.52□□□□□ -0.08
HMGCL-203ENST00000374490 A0A087WZ62 844 aa14.52□□□□□ -0.09
HMGCL-203ENST00000374490 A0A1W2PPM1 405 aa14.52□□□□□ -0.09
HMGCL-203ENST00000374490 H7C0C1 242 aa14.52□□□□□ -0.09
HMGCL-203ENST00000374490 FAM155BO75949 473 aa14.52□□□□□ -0.09
HMGCL-203ENST00000374490 SNAI1O95863 264 aaPredicted RBP14.52□□□□□ -0.09
HMGCL-203ENST00000374490 MT-ND3P03897 115 aa14.52□□□□□ -0.09
HMGCL-203ENST00000374490 CD48P09326 243 aa14.52□□□□□ -0.09
HMGCL-203ENST00000374490 CCND1P24385 295 aa14.52□□□□□ -0.09
HMGCL-203ENST00000374490 SSTR1P30872 391 aa14.52□□□□□ -0.09
HMGCL-203ENST00000374490 GRM5P41594 1212 aa14.52□□□□□ -0.09
HMGCL-203ENST00000374490 ATP5OP48047 213 aa14.52□□□□□ -0.09
HMGCL-203ENST00000374490 KCNJ2P63252 427 aa14.52□□□□□ -0.09
HMGCL-203ENST00000374490 MGAT5Q09328 741 aa14.52□□□□□ -0.09
HMGCL-203ENST00000374490 MAP2K5Q13163 448 aa14.52□□□□□ -0.09
HMGCL-203ENST00000374490 MSS51Q4VC12 460 aa14.52□□□□□ -0.09
HMGCL-203ENST00000374490 FAM183BPQ6ZVS7 135 aa14.52□□□□□ -0.09
HMGCL-203ENST00000374490 ZNF410Q86VK4 478 aa14.52□□□□□ -0.09
HMGCL-203ENST00000374490 SESTD1Q86VW0 696 aa14.52□□□□□ -0.09
HMGCL-203ENST00000374490 CEP57Q86XR8 500 aa14.52□□□□□ -0.09
HMGCL-203ENST00000374490 BANPQ8N9N5 519 aa14.52□□□□□ -0.09
HMGCL-203ENST00000374490 PPTC7Q8NI37 304 aa14.52□□□□□ -0.09
HMGCL-203ENST00000374490 ZNF75CPQ92670 426 aaPredicted RBP14.52□□□□□ -0.09
HMGCL-203ENST00000374490 ZNF668Q96K58 619 aaPredicted RBP14.52□□□□□ -0.09
HMGCL-203ENST00000374490 TMEM237Q96Q45 408 aa14.52□□□□□ -0.09
HMGCL-203ENST00000374490 LRRC37BQ96QE4 947 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms