RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 C5orf60A6NFR6 353 aa12.63□□□□□ -0.39
HMGCL-202ENST00000374487 PRPSAP2O60256 369 aa12.63□□□□□ -0.39
HMGCL-202ENST00000374487 GPR32O75388 356 aa12.63□□□□□ -0.39
HMGCL-202ENST00000374487 ABHD2P08910 425 aa12.63□□□□□ -0.39
HMGCL-202ENST00000374487 DESP17661 470 aa12.63□□□□□ -0.39
HMGCL-202ENST00000374487 CYP3A5P20815 502 aa12.63□□□□□ -0.39
HMGCL-202ENST00000374487 CDH6P55285 790 aa12.63□□□□□ -0.39
HMGCL-202ENST00000374487 TAZQ16635 292 aa12.63□□□□□ -0.39
HMGCL-202ENST00000374487 GLRA4Q5JXX5 417 aa12.63□□□□□ -0.39
HMGCL-202ENST00000374487 PPP1R26Q5T8A7 1209 aaPredicted RBP12.63□□□□□ -0.39
HMGCL-202ENST00000374487 RNASEH2BQ5TBB1 312 aaKnown RBP12.63□□□□□ -0.39
HMGCL-202ENST00000374487 FAM183BPQ6ZVS7 135 aa12.63□□□□□ -0.39
HMGCL-202ENST00000374487 C16orf59Q7L2K0 433 aa12.63□□□□□ -0.39
HMGCL-202ENST00000374487 ZBED8Q8IZ13 594 aa12.63□□□□□ -0.39
HMGCL-202ENST00000374487 VWCEQ96DN2 955 aa12.63□□□□□ -0.39
HMGCL-202ENST00000374487 SNX27Q96L92 541 aa12.63□□□□□ -0.39
HMGCL-202ENST00000374487 ZMAT2Q96NC0 199 aaKnown RBP12.63□□□□□ -0.39
HMGCL-202ENST00000374487 ZNF317Q96PQ6 595 aaPredicted RBP12.63□□□□□ -0.39
HMGCL-202ENST00000374487 MRPL45Q9BRJ2 306 aaKnown RBP12.63□□□□□ -0.39
HMGCL-202ENST00000374487 APOL6Q9BWW8 343 aa12.63□□□□□ -0.39
HMGCL-202ENST00000374487 C10orf88Q9H8K7 445 aa12.63□□□□□ -0.39
HMGCL-202ENST00000374487 VPS37BQ9H9H4 285 aa12.63□□□□□ -0.39
HMGCL-202ENST00000374487 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.63□□□□□ -0.39
HMGCL-202ENST00000374487 FAM49BQ9NUQ9 324 aa12.63□□□□□ -0.39
HMGCL-202ENST00000374487 C2CD4BA6NLJ0 364 aa12.63□□□□□ -0.39
HMGCL-202ENST00000374487 GOLGA8MH3BSY2 632 aa12.63□□□□□ -0.39
HMGCL-202ENST00000374487 APOC4-APOC2K7ER74 178 aa12.63□□□□□ -0.39
HMGCL-202ENST00000374487 MCF2LO15068 1137 aa12.63□□□□□ -0.39
HMGCL-202ENST00000374487 TIMP1P01033 207 aa12.63□□□□□ -0.39
HMGCL-202ENST00000374487 APOC2P02655 101 aa12.63□□□□□ -0.39
HMGCL-202ENST00000374487 BRAFP15056 766 aa12.63□□□□□ -0.39
HMGCL-202ENST00000374487 SNX16P57768 344 aa12.63□□□□□ -0.39
HMGCL-202ENST00000374487 EIF3EP60228 445 aaKnown RBP12.63□□□□□ -0.39
HMGCL-202ENST00000374487 PDIA2Q13087 525 aaKnown RBP12.63□□□□□ -0.39
HMGCL-202ENST00000374487 LRRC14Q15048 493 aa12.63□□□□□ -0.39
HMGCL-202ENST00000374487 SH3PXD2AQ5TCZ1 1133 aa12.63□□□□□ -0.39
HMGCL-202ENST00000374487 SCYL2Q6P3W7 929 aa12.63□□□□□ -0.39
HMGCL-202ENST00000374487 CCDC121Q6ZUS5 278 aa12.63□□□□□ -0.39
HMGCL-202ENST00000374487 CCDC13Q8IYE1 715 aa12.63□□□□□ -0.39
HMGCL-202ENST00000374487 ANKS4BQ8N8V4 417 aa12.63□□□□□ -0.39
HMGCL-202ENST00000374487 ANKRD42Q8N9B4 389 aa12.63□□□□□ -0.39
HMGCL-202ENST00000374487 OR6B3Q8NGW1 331 aa12.63□□□□□ -0.39
HMGCL-202ENST00000374487 SPATA18Q8TC71 538 aa12.63□□□□□ -0.39
HMGCL-202ENST00000374487 UBE2OQ9C0C9 1292 aaKnown RBP12.63□□□□□ -0.39
HMGCL-202ENST00000374487 CXCL16Q9H2A7 254 aa12.63□□□□□ -0.39
HMGCL-202ENST00000374487 TUBGCP4Q9UGJ1 667 aa12.63□□□□□ -0.39
HMGCL-202ENST00000374487 SMIM35A0A1B0GVV1 85 aa12.62□□□□□ -0.39
HMGCL-202ENST00000374487 FOXO6A8MYZ6 492 aa12.62□□□□□ -0.39
HMGCL-202ENST00000374487 PPEF2O14830 753 aa12.62□□□□□ -0.39
HMGCL-202ENST00000374487 DARSP14868 501 aaKnown RBP12.62□□□□□ -0.39
HMGCL-202ENST00000374487 CREB1P16220 341 aa12.62□□□□□ -0.39
HMGCL-202ENST00000374487 GDF10P55107 478 aa12.62□□□□□ -0.39
HMGCL-202ENST00000374487 ATP11AP98196 1134 aa12.62□□□□□ -0.39
HMGCL-202ENST00000374487 KRT81Q14533 505 aa12.62□□□□□ -0.39
HMGCL-202ENST00000374487 PCBP1Q15365 356 aaKnown RBP eCLIP12.62□□□□□ -0.39
HMGCL-202ENST00000374487 HIF1AQ16665 826 aa12.62□□□□□ -0.39
HMGCL-202ENST00000374487 C15orf59Q2T9L4 293 aaPredicted RBP12.62□□□□□ -0.39
HMGCL-202ENST00000374487 C6orf89Q6UWU4 347 aa12.62□□□□□ -0.39
HMGCL-202ENST00000374487 CAPN12Q6ZSI9 719 aa12.62□□□□□ -0.39
HMGCL-202ENST00000374487 MAP7D3Q8IWC1 876 aa12.62□□□□□ -0.39
HMGCL-202ENST00000374487 PPIL6Q8IXY8 311 aa12.62□□□□□ -0.39
HMGCL-202ENST00000374487 SRRM1Q8IYB3 904 aaKnown RBP12.62□□□□□ -0.39
HMGCL-202ENST00000374487 CYP4X1Q8N118 509 aa12.62□□□□□ -0.39
HMGCL-202ENST00000374487 LRRC52Q8N7C0 313 aa12.62□□□□□ -0.39
HMGCL-202ENST00000374487 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.62□□□□□ -0.39
HMGCL-202ENST00000374487 C18orf25Q96B23 403 aaPredicted RBP12.62□□□□□ -0.39
HMGCL-202ENST00000374487 NXF3Q9H4D5 531 aaKnown RBP12.62□□□□□ -0.39
HMGCL-202ENST00000374487 CCDC134Q9H6E4 229 aa12.62□□□□□ -0.39
HMGCL-202ENST00000374487 SAMD15Q9P1V8 674 aa12.62□□□□□ -0.39
HMGCL-202ENST00000374487 LGALS13Q9UHV8 139 aa12.62□□□□□ -0.39
HMGCL-202ENST00000374487 NOD1Q9Y239 953 aa12.62□□□□□ -0.39
HMGCL-202ENST00000374487 LTBP2Q14767 1821 aa12.62□□□□□ -0.39
HMGCL-202ENST00000374487 GOLGA6L7A0A1B0GV03 622 aa12.62□□□□□ -0.39
HMGCL-202ENST00000374487 A8MXQ7 604 aa12.62□□□□□ -0.39
HMGCL-202ENST00000374487 POC1B-GALNT4F8VUJ3 575 aa12.62□□□□□ -0.39
HMGCL-202ENST00000374487 ALOX15BO15296 676 aa12.62□□□□□ -0.39
HMGCL-202ENST00000374487 PFKMP08237 780 aa12.62□□□□□ -0.39
HMGCL-202ENST00000374487 RBP3P10745 1247 aa12.62□□□□□ -0.39
HMGCL-202ENST00000374487 AKAP5P24588 427 aa12.62□□□□□ -0.39
HMGCL-202ENST00000374487 TFDP2Q14188 446 aa12.62□□□□□ -0.39
HMGCL-202ENST00000374487 FASTKD3Q14CZ7 662 aaKnown RBP12.62□□□□□ -0.39
HMGCL-202ENST00000374487 TMED2Q15363 201 aa12.62□□□□□ -0.39
HMGCL-202ENST00000374487 PMF1Q6P1K2 205 aa12.62□□□□□ -0.39
HMGCL-202ENST00000374487 SCUBE3Q8IX30 993 aa12.62□□□□□ -0.39
HMGCL-202ENST00000374487 LRRC34Q8IZ02 419 aa12.62□□□□□ -0.39
HMGCL-202ENST00000374487 RIBC1Q8N443 379 aaPredicted RBP12.62□□□□□ -0.39
HMGCL-202ENST00000374487 TAB3Q8N5C8 712 aaPredicted RBP12.62□□□□□ -0.39
HMGCL-202ENST00000374487 FAM71DQ8N9W8 422 aa12.62□□□□□ -0.39
HMGCL-202ENST00000374487 DNAJB3Q8WWF6 145 aa12.62□□□□□ -0.39
HMGCL-202ENST00000374487 PRCCQ92733 491 aaPredicted RBP12.62□□□□□ -0.39
HMGCL-202ENST00000374487 P3H4Q92791 437 aa12.62□□□□□ -0.39
HMGCL-202ENST00000374487 PIWIL1Q96J94 861 aaKnown RBP12.62□□□□□ -0.39
HMGCL-202ENST00000374487 PEBP4Q96S96 227 aa12.62□□□□□ -0.39
HMGCL-202ENST00000374487 LBHD1Q9BQE6 289 aaPredicted RBP12.62□□□□□ -0.39
HMGCL-202ENST00000374487 NSRP1Q9H0G5 558 aaKnown RBP12.62□□□□□ -0.39
HMGCL-202ENST00000374487 NGRNQ9NPE2 291 aaKnown RBP12.62□□□□□ -0.39
HMGCL-202ENST00000374487 RNF19AQ9NV58 838 aa12.62□□□□□ -0.39
HMGCL-202ENST00000374487 NKIRAS1Q9NYS0 192 aa12.62□□□□□ -0.39
HMGCL-202ENST00000374487 PIN4Q9Y237 131 aaKnown RBP12.62□□□□□ -0.39
HMGCL-202ENST00000374487 RASA4BC9J798 803 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 109.8 ms