RNA–Protein interactions for RNA: ENST00000374199.8

PRPF4-202, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRPF4, Length 3,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-202ENST00000374199 CALCOCO2Q13137 446 aa13.13□□□□□ -0.31
PRPF4-202ENST00000374199 SLC29A2Q14542 456 aa13.13□□□□□ -0.31
PRPF4-202ENST00000374199 EFHC1Q5JVL4 640 aa13.13□□□□□ -0.31
PRPF4-202ENST00000374199 PM20D1Q6GTS8 502 aa13.13□□□□□ -0.31
PRPF4-202ENST00000374199 OR6B2Q6IFH4 312 aa13.13□□□□□ -0.31
PRPF4-202ENST00000374199 RTN4RL1Q86UN2 441 aaPredicted RBP13.13□□□□□ -0.31
PRPF4-202ENST00000374199 FAM172AQ8WUF8 416 aa13.13□□□□□ -0.31
PRPF4-202ENST00000374199 OLFM3Q96PB7 478 aa13.13□□□□□ -0.31
PRPF4-202ENST00000374199 GAD1Q99259 594 aa13.13□□□□□ -0.31
PRPF4-202ENST00000374199 APOL6Q9BWW8 343 aa13.13□□□□□ -0.31
PRPF4-202ENST00000374199 GPBP1L1Q9HC44 474 aaPredicted RBP13.13□□□□□ -0.31
PRPF4-202ENST00000374199 TMEM30AQ9NV96 361 aa13.13□□□□□ -0.31
PRPF4-202ENST00000374199 CST8O60676 142 aa13.13□□□□□ -0.31
PRPF4-202ENST00000374199 EOMESO95936 686 aa13.13□□□□□ -0.31
PRPF4-202ENST00000374199 CKBP12277 381 aa13.13□□□□□ -0.31
PRPF4-202ENST00000374199 TFE3P19532 575 aaPredicted RBP13.13□□□□□ -0.31
PRPF4-202ENST00000374199 GDF10P55107 478 aa13.13□□□□□ -0.31
PRPF4-202ENST00000374199 MRPS5P82675 430 aaKnown RBP13.13□□□□□ -0.31
PRPF4-202ENST00000374199 SEMA3BQ13214 749 aa13.13□□□□□ -0.31
PRPF4-202ENST00000374199 XRCC4Q13426 336 aa13.13□□□□□ -0.31
PRPF4-202ENST00000374199 GPNMBQ14956 572 aa13.13□□□□□ -0.31
PRPF4-202ENST00000374199 SMTNL2Q2TAL5 461 aa13.13□□□□□ -0.31
PRPF4-202ENST00000374199 ANKRD20A8PQ5CZ79 823 aa13.13□□□□□ -0.31
PRPF4-202ENST00000374199 KCNT1Q5JUK3 1230 aa13.13□□□□□ -0.31
PRPF4-202ENST00000374199 RNF180Q86T96 592 aa13.13□□□□□ -0.31
PRPF4-202ENST00000374199 TDRPQ86YL5 185 aa13.13□□□□□ -0.31
PRPF4-202ENST00000374199 MYCBPAPQ8TBZ2 947 aa13.13□□□□□ -0.31
PRPF4-202ENST00000374199 ACSF2Q96CM8 615 aaPredicted RBP13.13□□□□□ -0.31
PRPF4-202ENST00000374199 SLC9A7Q96T83 725 aa13.13□□□□□ -0.31
PRPF4-202ENST00000374199 ACBD6Q9BR61 282 aa13.13□□□□□ -0.31
PRPF4-202ENST00000374199 SNRNP25Q9BV90 132 aaKnown RBP13.13□□□□□ -0.31
PRPF4-202ENST00000374199 TPX2Q9ULW0 747 aaKnown RBP13.13□□□□□ -0.31
PRPF4-202ENST00000374199 BRCA2P51587 3418 aa13.13□□□□□ -0.31
PRPF4-202ENST00000374199 FBXO21O94952 628 aa13.13□□□□□ -0.31
PRPF4-202ENST00000374199 TSHRP16473 764 aa13.13□□□□□ -0.31
PRPF4-202ENST00000374199 TYMPP19971 482 aa13.13□□□□□ -0.31
PRPF4-202ENST00000374199 HOXD10P28358 340 aa13.13□□□□□ -0.31
PRPF4-202ENST00000374199 MMP13P45452 471 aa13.13□□□□□ -0.31
PRPF4-202ENST00000374199 DEFB115Q30KQ5 88 aa13.13□□□□□ -0.31
PRPF4-202ENST00000374199 PIGZQ86VD9 579 aa13.13□□□□□ -0.31
PRPF4-202ENST00000374199 PCDH19Q8TAB3 1148 aa13.13□□□□□ -0.31
PRPF4-202ENST00000374199 UBLCP1Q8WVY7 318 aaPredicted RBP13.13□□□□□ -0.31
PRPF4-202ENST00000374199 RUFY1Q96T51 708 aa13.13□□□□□ -0.31
PRPF4-202ENST00000374199 SMOQ99835 787 aa13.13□□□□□ -0.31
PRPF4-202ENST00000374199 ZWILCHQ9H900 591 aa13.13□□□□□ -0.31
PRPF4-202ENST00000374199 NINJ2Q9NZG7 142 aa13.13□□□□□ -0.31
PRPF4-202ENST00000374199 FZD10Q9ULW2 581 aa13.13□□□□□ -0.31
PRPF4-202ENST00000374199 MYO16Q9Y6X6 1858 aa13.12□□□□□ -0.31
PRPF4-202ENST00000374199 EIF3HO15372 352 aaKnown RBP eCLIP13.12□□□□□ -0.31
PRPF4-202ENST00000374199 NR1D1P20393 614 aa13.12□□□□□ -0.31
PRPF4-202ENST00000374199 ACTN2P35609 894 aa13.12□□□□□ -0.31
PRPF4-202ENST00000374199 THPOP40225 353 aa13.12□□□□□ -0.31
PRPF4-202ENST00000374199 RGS7P49802 495 aa13.12□□□□□ -0.31
PRPF4-202ENST00000374199 IRAK1P51617 712 aa13.12□□□□□ -0.31
PRPF4-202ENST00000374199 ERMARDQ5T6L9 678 aa13.12□□□□□ -0.31
PRPF4-202ENST00000374199 IZUMO3Q5VZ72 239 aa13.12□□□□□ -0.31
PRPF4-202ENST00000374199 LRRC31Q6UY01 552 aa13.12□□□□□ -0.31
PRPF4-202ENST00000374199 PCGF5Q86SE9 256 aa13.12□□□□□ -0.31
PRPF4-202ENST00000374199 SERPINB12Q96P63 405 aa13.12□□□□□ -0.31
PRPF4-202ENST00000374199 WDR83Q9BRX9 315 aaKnown RBP13.12□□□□□ -0.31
PRPF4-202ENST00000374199 CCDC134Q9H6E4 229 aa13.12□□□□□ -0.31
PRPF4-202ENST00000374199 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.12□□□□□ -0.31
PRPF4-202ENST00000374199 TRMT13Q9NUP7 481 aaKnown RBP13.12□□□□□ -0.31
PRPF4-202ENST00000374199 ANAPC5Q9UJX4 755 aa13.12□□□□□ -0.31
PRPF4-202ENST00000374199 ALOX15BO15296 676 aa13.12□□□□□ -0.31
PRPF4-202ENST00000374199 ATP2C2O75185 946 aa13.12□□□□□ -0.31
PRPF4-202ENST00000374199 EFEMP2O95967 443 aa13.12□□□□□ -0.31
PRPF4-202ENST00000374199 IGLV3-25P01717 112 aa13.12□□□□□ -0.31
PRPF4-202ENST00000374199 SDC4P31431 198 aa13.12□□□□□ -0.31
PRPF4-202ENST00000374199 TUSC3Q13454 348 aa13.12□□□□□ -0.31
PRPF4-202ENST00000374199 P3H1Q32P28 736 aa13.12□□□□□ -0.31
PRPF4-202ENST00000374199 TIGD5Q53EQ6 642 aa13.12□□□□□ -0.31
PRPF4-202ENST00000374199 DENND2CQ68D51 928 aa13.12□□□□□ -0.31
PRPF4-202ENST00000374199 SH2D3CQ8N5H7 860 aa13.12□□□□□ -0.31
PRPF4-202ENST00000374199 KCTD6Q8NC69 237 aa13.12□□□□□ -0.31
PRPF4-202ENST00000374199 SLAIN1Q8ND83 568 aa13.12□□□□□ -0.31
PRPF4-202ENST00000374199 IRGQQ8WZA9 623 aa13.12□□□□□ -0.31
PRPF4-202ENST00000374199 PGBD4Q96DM1 585 aa13.12□□□□□ -0.31
PRPF4-202ENST00000374199 SUSD3Q96L08 255 aa13.12□□□□□ -0.31
PRPF4-202ENST00000374199 DSEQ9UL01 958 aa13.12□□□□□ -0.31
PRPF4-202ENST00000374199 AGTP01019 485 aa13.11□□□□□ -0.31
PRPF4-202ENST00000374199 GCAP28676 217 aa13.11□□□□□ -0.31
PRPF4-202ENST00000374199 STIP1P31948 543 aaKnown RBP13.11□□□□□ -0.31
PRPF4-202ENST00000374199 SCNN1GP51170 649 aa13.11□□□□□ -0.31
PRPF4-202ENST00000374199 AUHQ13825 339 aaKnown RBP13.11□□□□□ -0.31
PRPF4-202ENST00000374199 TFDP2Q14188 446 aa13.11□□□□□ -0.31
PRPF4-202ENST00000374199 KCNJ11Q14654 390 aa13.11□□□□□ -0.31
PRPF4-202ENST00000374199 CA9Q16790 459 aa13.11□□□□□ -0.31
PRPF4-202ENST00000374199 CPT1BQ92523 772 aa13.11□□□□□ -0.31
PRPF4-202ENST00000374199 LPPQ93052 612 aa13.11□□□□□ -0.31
PRPF4-202ENST00000374199 NTAN1Q96AB6 310 aa13.11□□□□□ -0.31
PRPF4-202ENST00000374199 PAAF1Q9BRP4 392 aa13.11□□□□□ -0.31
PRPF4-202ENST00000374199 DHRS4Q9BTZ2 278 aa13.11□□□□□ -0.31
PRPF4-202ENST00000374199 ELAC1Q9H777 363 aaKnown RBP13.11□□□□□ -0.31
PRPF4-202ENST00000374199 CNGB3Q9NQW8 809 aa13.11□□□□□ -0.31
PRPF4-202ENST00000374199 ASIC3Q9UHC3 531 aa13.11□□□□□ -0.31
PRPF4-202ENST00000374199 KIAA1671Q9BY89 1806 aa13.11□□□□□ -0.31
PRPF4-202ENST00000374199 A0A1W2PQ45 241 aaPredicted RBP13.11□□□□□ -0.31
PRPF4-202ENST00000374199 A0A1W2PQY0 241 aa13.11□□□□□ -0.31
PRPF4-202ENST00000374199 PRPSAP2O60256 369 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms