RNA–Protein interactions for RNA: ENST00000373888.8

SMPDL3B-201, Transcript of sphingomyelin phosphodiesterase acid like 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMPDL3B, Length 1,548 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3B-201ENST00000373888 SCML2Q9UQR0 700 aa15.36■□□□□ 0.05
SMPDL3B-201ENST00000373888 TMEM191CA6NGB0 347 aa15.35■□□□□ 0.05
SMPDL3B-201ENST00000373888 PER2O15055 1255 aa15.35■□□□□ 0.05
SMPDL3B-201ENST00000373888 BUB1O43683 1085 aa15.35■□□□□ 0.05
SMPDL3B-201ENST00000373888 HSF2BPO75031 334 aa15.35■□□□□ 0.05
SMPDL3B-201ENST00000373888 GJB6O95452 261 aa15.35■□□□□ 0.05
SMPDL3B-201ENST00000373888 CSH1P0DML2 217 aa15.35■□□□□ 0.05
SMPDL3B-201ENST00000373888 CSH2P0DML3 217 aa15.35■□□□□ 0.05
SMPDL3B-201ENST00000373888 YWHAQP27348 245 aa15.35■□□□□ 0.05
SMPDL3B-201ENST00000373888 NOP2P46087 812 aaKnown RBP15.35■□□□□ 0.05
SMPDL3B-201ENST00000373888 RPL7AP62424 266 aaKnown RBP15.35■□□□□ 0.05
SMPDL3B-201ENST00000373888 MTMR3Q13615 1198 aa15.35■□□□□ 0.05
SMPDL3B-201ENST00000373888 VEPH1Q14D04 833 aa15.35■□□□□ 0.05
SMPDL3B-201ENST00000373888 TAF5Q15542 800 aa15.35■□□□□ 0.05
SMPDL3B-201ENST00000373888 IFI16Q16666 785 aaKnown RBP15.35■□□□□ 0.05
SMPDL3B-201ENST00000373888 DCUN1D2Q6PH85 259 aa15.35■□□□□ 0.05
SMPDL3B-201ENST00000373888 MNS1Q8NEH6 495 aa15.35■□□□□ 0.05
SMPDL3B-201ENST00000373888 NDRG1Q92597 394 aaKnown RBP15.35■□□□□ 0.05
SMPDL3B-201ENST00000373888 PPP2R3CQ969Q6 453 aa15.35■□□□□ 0.05
SMPDL3B-201ENST00000373888 MYRFLQ96LU7 910 aa15.35■□□□□ 0.05
SMPDL3B-201ENST00000373888 MCEEQ96PE7 176 aa15.35■□□□□ 0.05
SMPDL3B-201ENST00000373888 TLE6Q9H808 572 aa15.35■□□□□ 0.05
SMPDL3B-201ENST00000373888 MAN1C1Q9NR34 630 aa15.35■□□□□ 0.05
SMPDL3B-201ENST00000373888 EHD2Q9NZN4 543 aa15.35■□□□□ 0.05
SMPDL3B-201ENST00000373888 LMCD1Q9NZU5 365 aa15.35■□□□□ 0.05
SMPDL3B-201ENST00000373888 DPP7Q9UHL4 492 aa15.35■□□□□ 0.05
SMPDL3B-201ENST00000373888 ASB3Q9Y575 518 aa15.35■□□□□ 0.05
SMPDL3B-201ENST00000373888 HCFC2Q9Y5Z7 792 aa15.35■□□□□ 0.05
SMPDL3B-201ENST00000373888 MRFAP1Q9Y605 127 aa15.35■□□□□ 0.05
SMPDL3B-201ENST00000373888 TRIOBPQ9H2D6 2365 aa15.35■□□□□ 0.05
SMPDL3B-201ENST00000373888 CDH23Q9H251 3354 aa15.34■□□□□ 0.05
SMPDL3B-201ENST00000373888 YJEFN3A6XGL0 299 aa15.34■□□□□ 0.05
SMPDL3B-201ENST00000373888 E7ENQ6 273 aa15.34■□□□□ 0.05
SMPDL3B-201ENST00000373888 LRG1P02750 347 aa15.34■□□□□ 0.05
SMPDL3B-201ENST00000373888 EPCAMP16422 314 aa15.34■□□□□ 0.05
SMPDL3B-201ENST00000373888 HMGA1P17096 107 aaKnown RBP15.34■□□□□ 0.05
SMPDL3B-201ENST00000373888 HOXA9P31269 272 aa15.34■□□□□ 0.05
SMPDL3B-201ENST00000373888 RFC1P35251 1148 aaPredicted RBP15.34■□□□□ 0.05
SMPDL3B-201ENST00000373888 NRIP1P48552 1158 aa15.34■□□□□ 0.05
SMPDL3B-201ENST00000373888 EPHB3P54753 998 aa15.34■□□□□ 0.05
SMPDL3B-201ENST00000373888 NAP1L1P55209 391 aaKnown RBP15.34■□□□□ 0.05
SMPDL3B-201ENST00000373888 IFRD2Q12894 506 aaPredicted RBP15.34■□□□□ 0.05
SMPDL3B-201ENST00000373888 RBM23Q86U06 439 aaKnown RBP15.34■□□□□ 0.05
SMPDL3B-201ENST00000373888 ITIH5Q86UX2 942 aa15.34■□□□□ 0.05
SMPDL3B-201ENST00000373888 SLC35F6Q8N357 371 aa15.34■□□□□ 0.05
SMPDL3B-201ENST00000373888 TPCN2Q8NHX9 752 aa15.34■□□□□ 0.05
SMPDL3B-201ENST00000373888 JOSD2Q8TAC2 188 aa15.34■□□□□ 0.05
SMPDL3B-201ENST00000373888 FNIP1Q8TF40 1166 aa15.34■□□□□ 0.05
SMPDL3B-201ENST00000373888 PSMG2Q969U7 264 aa15.34■□□□□ 0.05
SMPDL3B-201ENST00000373888 TRMT2BQ96GJ1 504 aaKnown RBP15.34■□□□□ 0.05
SMPDL3B-201ENST00000373888 LCMT1Q9UIC8 334 aa15.34■□□□□ 0.05
SMPDL3B-201ENST00000373888 ANAPC7Q9UJX3 599 aa15.34■□□□□ 0.05
SMPDL3B-201ENST00000373888 GREB1Q4ZG55 1949 aa15.34■□□□□ 0.05
SMPDL3B-201ENST00000373888 MTCL1Q9Y4B5 1905 aaKnown RBP15.33■□□□□ 0.05
SMPDL3B-201ENST00000373888 C2CD4BA6NLJ0 364 aa15.33■□□□□ 0.05
SMPDL3B-201ENST00000373888 SOX1O00570 391 aaPredicted RBP15.33■□□□□ 0.05
SMPDL3B-201ENST00000373888 DAB1O75553 588 aa15.33■□□□□ 0.05
SMPDL3B-201ENST00000373888 GRAP2O75791 330 aa15.33■□□□□ 0.05
SMPDL3B-201ENST00000373888 ZMYND10O75800 440 aa15.33■□□□□ 0.05
SMPDL3B-201ENST00000373888 MOCS3O95396 460 aa15.33■□□□□ 0.05
SMPDL3B-201ENST00000373888 LTFP02788 710 aa15.33■□□□□ 0.05
SMPDL3B-201ENST00000373888 FLT3P36888 993 aa15.33■□□□□ 0.05
SMPDL3B-201ENST00000373888 YWHAZP63104 245 aaKnown RBP15.33■□□□□ 0.05
SMPDL3B-201ENST00000373888 KCNC3Q14003 757 aa15.33■□□□□ 0.05
SMPDL3B-201ENST00000373888 PPM1LQ5SGD2 360 aa15.33■□□□□ 0.05
SMPDL3B-201ENST00000373888 ELMSAN1Q6PJG2 1045 aa15.33■□□□□ 0.05
SMPDL3B-201ENST00000373888 HFE2Q6ZVN8 426 aa15.33■□□□□ 0.05
SMPDL3B-201ENST00000373888 BEND5Q7L4P6 421 aa15.33■□□□□ 0.05
SMPDL3B-201ENST00000373888 MON1AQ86VX9 555 aa15.33■□□□□ 0.05
SMPDL3B-201ENST00000373888 FBXO32Q969P5 355 aa15.33■□□□□ 0.05
SMPDL3B-201ENST00000373888 FAM149B1Q96BN6 582 aa15.33■□□□□ 0.05
SMPDL3B-201ENST00000373888 TRIM62Q9BVG3 475 aa15.33■□□□□ 0.05
SMPDL3B-201ENST00000373888 IRX2Q9BZI1 471 aaPredicted RBP15.33■□□□□ 0.05
SMPDL3B-201ENST00000373888 TRIM7Q9C029 511 aa15.33■□□□□ 0.05
SMPDL3B-201ENST00000373888 NSUN3Q9H649 340 aaKnown RBP15.33■□□□□ 0.05
SMPDL3B-201ENST00000373888 POPDC2Q9HBU9 364 aa15.33■□□□□ 0.05
SMPDL3B-201ENST00000373888 CAPN6Q9Y6Q1 641 aa15.33■□□□□ 0.05
SMPDL3B-201ENST00000373888 MYO7AQ13402 2215 aa15.33■□□□□ 0.04
SMPDL3B-201ENST00000373888 EFCAB8A8MWE9 144 aa15.33■□□□□ 0.04
SMPDL3B-201ENST00000373888 MYO1FO00160 1098 aa15.33■□□□□ 0.04
SMPDL3B-201ENST00000373888 POU2F2P09086 479 aa15.33■□□□□ 0.04
SMPDL3B-201ENST00000373888 HNRNPA1P09651 372 aaKnown RBP eCLIP15.33■□□□□ 0.04
SMPDL3B-201ENST00000373888 RNASE9P60153 205 aaKnown RBP15.33■□□□□ 0.04
SMPDL3B-201ENST00000373888 TAF10Q12962 218 aa15.33■□□□□ 0.04
SMPDL3B-201ENST00000373888 TRNP1Q6NT89 227 aa15.33■□□□□ 0.04
SMPDL3B-201ENST00000373888 C11orf63Q6NUN7 778 aa15.33■□□□□ 0.04
SMPDL3B-201ENST00000373888 DNAJB7Q7Z6W7 309 aaPredicted RBP15.33■□□□□ 0.04
SMPDL3B-201ENST00000373888 SCD5Q86SK9 330 aa15.33■□□□□ 0.04
SMPDL3B-201ENST00000373888 ARHGAP18Q8N392 663 aa15.33■□□□□ 0.04
SMPDL3B-201ENST00000373888 EMC1Q8N766 993 aa15.33■□□□□ 0.04
SMPDL3B-201ENST00000373888 CEP112Q8N8E3 955 aa15.33■□□□□ 0.04
SMPDL3B-201ENST00000373888 LRRC57Q8N9N7 239 aa15.33■□□□□ 0.04
SMPDL3B-201ENST00000373888 TRIM58Q8NG06 486 aa15.33■□□□□ 0.04
SMPDL3B-201ENST00000373888 OVCA2Q8WZ82 227 aa15.33■□□□□ 0.04
SMPDL3B-201ENST00000373888 GOLGA1Q92805 767 aa15.33■□□□□ 0.04
SMPDL3B-201ENST00000373888 SLITRK1Q96PX8 696 aa15.33■□□□□ 0.04
SMPDL3B-201ENST00000373888 SLC2A13Q96QE2 648 aa15.33■□□□□ 0.04
SMPDL3B-201ENST00000373888 PRDM12Q9H4Q4 367 aa15.33■□□□□ 0.04
SMPDL3B-201ENST00000373888 ZDHHC7Q9NXF8 308 aa15.33■□□□□ 0.04
SMPDL3B-201ENST00000373888 CDC23Q9UJX2 597 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms