RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 ST13P50502 369 aaKnown RBP14.79□□□□□ -0.04
TRAF1-201ENST00000373887 ZNF177Q13360 481 aaPredicted RBP14.79□□□□□ -0.04
TRAF1-201ENST00000373887 LRIG3Q6UXM1 1119 aa14.79□□□□□ -0.04
TRAF1-201ENST00000373887 FAM71DQ8N9W8 422 aa14.79□□□□□ -0.04
TRAF1-201ENST00000373887 DDHD1Q8NEL9 900 aa14.79□□□□□ -0.04
TRAF1-201ENST00000373887 KLHL31Q9H511 634 aa14.79□□□□□ -0.04
TRAF1-201ENST00000373887 C10orf88Q9H8K7 445 aa14.79□□□□□ -0.04
TRAF1-201ENST00000373887 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.79□□□□□ -0.04
TRAF1-201ENST00000373887 RAD51CO43502 376 aa14.79□□□□□ -0.04
TRAF1-201ENST00000373887 CDH16O75309 829 aa14.79□□□□□ -0.04
TRAF1-201ENST00000373887 HSMCR30P0CW71 290 aa14.79□□□□□ -0.04
TRAF1-201ENST00000373887 PNPLA4P41247 253 aa14.79□□□□□ -0.04
TRAF1-201ENST00000373887 LAMTOR4Q0VGL1 99 aa14.79□□□□□ -0.04
TRAF1-201ENST00000373887 TRIM32Q13049 653 aa14.79□□□□□ -0.04
TRAF1-201ENST00000373887 MFSD10Q14728 455 aa14.79□□□□□ -0.04
TRAF1-201ENST00000373887 CYP51A1Q16850 503 aa14.79□□□□□ -0.04
TRAF1-201ENST00000373887 PCNX4Q63HM2 1172 aa14.79□□□□□ -0.04
TRAF1-201ENST00000373887 VPS37AQ8NEZ2 397 aa14.79□□□□□ -0.04
TRAF1-201ENST00000373887 MRPS31Q92665 395 aaKnown RBP14.79□□□□□ -0.04
TRAF1-201ENST00000373887 APPL1Q9UKG1 709 aa14.79□□□□□ -0.04
TRAF1-201ENST00000373887 A0A1W2PQC6 194 aa14.79□□□□□ -0.04
TRAF1-201ENST00000373887 KLRC2P26717 231 aa14.79□□□□□ -0.04
TRAF1-201ENST00000373887 PIGHQ14442 188 aaPredicted RBP14.79□□□□□ -0.04
TRAF1-201ENST00000373887 DDI1Q8WTU0 396 aa14.79□□□□□ -0.04
TRAF1-201ENST00000373887 CBWD1Q9BRT8 395 aa14.79□□□□□ -0.04
TRAF1-201ENST00000373887 MTG1Q9BT17 334 aaPredicted RBP14.79□□□□□ -0.04
TRAF1-201ENST00000373887 CXorf56Q9H5V9 222 aa14.79□□□□□ -0.04
TRAF1-201ENST00000373887 WDR35Q9P2L0 1181 aa14.79□□□□□ -0.04
TRAF1-201ENST00000373887 PDE5AO76074 875 aa14.79□□□□□ -0.04
TRAF1-201ENST00000373887 ASS1P00966 412 aaKnown RBP14.79□□□□□ -0.04
TRAF1-201ENST00000373887 CXCL8P10145 99 aa14.79□□□□□ -0.04
TRAF1-201ENST00000373887 PSMA4P25789 261 aaKnown RBP14.79□□□□□ -0.04
TRAF1-201ENST00000373887 CSNK2BP67870 215 aa14.79□□□□□ -0.04
TRAF1-201ENST00000373887 HIST2H2ACQ16777 129 aaPredicted RBP14.79□□□□□ -0.04
TRAF1-201ENST00000373887 HIST2H2AA3Q6FI13 130 aa14.79□□□□□ -0.04
TRAF1-201ENST00000373887 FAM136AQ96C01 138 aa14.79□□□□□ -0.04
TRAF1-201ENST00000373887 KCTD10Q9H3F6 313 aa14.79□□□□□ -0.04
TRAF1-201ENST00000373887 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.79□□□□□ -0.04
TRAF1-201ENST00000373887 CRLS1Q9UJA2 301 aa14.79□□□□□ -0.04
TRAF1-201ENST00000373887 SPATA2Q9UM82 520 aa14.79□□□□□ -0.04
TRAF1-201ENST00000373887 E9PBE3 544 aa14.78□□□□□ -0.04
TRAF1-201ENST00000373887 MAP3K13O43283 966 aa14.78□□□□□ -0.04
TRAF1-201ENST00000373887 TRIM13O60858 407 aa14.78□□□□□ -0.04
TRAF1-201ENST00000373887 PMPCBO75439 489 aa14.78□□□□□ -0.04
TRAF1-201ENST00000373887 SNRPAP09012 282 aaKnown RBP14.78□□□□□ -0.04
TRAF1-201ENST00000373887 PSMC6P62333 389 aa14.78□□□□□ -0.04
TRAF1-201ENST00000373887 CUL2Q13617 745 aa14.78□□□□□ -0.04
TRAF1-201ENST00000373887 MTFR1Q15390 333 aa14.78□□□□□ -0.04
TRAF1-201ENST00000373887 FAXCQ5TGI0 409 aa14.78□□□□□ -0.04
TRAF1-201ENST00000373887 E4F1Q66K89 784 aaPredicted RBP14.78□□□□□ -0.04
TRAF1-201ENST00000373887 C11orf88Q6PI97 169 aa14.78□□□□□ -0.04
TRAF1-201ENST00000373887 CYP2W1Q8TAV3 490 aa14.78□□□□□ -0.04
TRAF1-201ENST00000373887 MDM1Q8TC05 714 aa14.78□□□□□ -0.04
TRAF1-201ENST00000373887 PDGFDQ9GZP0 370 aaPredicted RBP14.78□□□□□ -0.04
TRAF1-201ENST00000373887 GPATCH2LQ9NWQ4 482 aa14.78□□□□□ -0.04
TRAF1-201ENST00000373887 LRRIQ3A6PVS8 624 aaPredicted RBP14.78□□□□□ -0.04
TRAF1-201ENST00000373887 SGPL1O95470 568 aa14.78□□□□□ -0.04
TRAF1-201ENST00000373887 CNTN1Q12860 1018 aa14.78□□□□□ -0.04
TRAF1-201ENST00000373887 BTG3Q14201 252 aaPredicted RBP14.78□□□□□ -0.04
TRAF1-201ENST00000373887 TMEM132BQ14DG7 1078 aa14.78□□□□□ -0.04
TRAF1-201ENST00000373887 EFHC1Q5JVL4 640 aa14.78□□□□□ -0.04
TRAF1-201ENST00000373887 ZNF669Q96BR6 464 aaPredicted RBP14.78□□□□□ -0.04
TRAF1-201ENST00000373887 PIF1Q9H611 641 aa14.78□□□□□ -0.04
TRAF1-201ENST00000373887 CD248Q9HCU0 757 aa14.78□□□□□ -0.04
TRAF1-201ENST00000373887 HMX1Q9NP08 348 aaPredicted RBP14.78□□□□□ -0.04
TRAF1-201ENST00000373887 FAM25AB3EWG3 89 aa14.78□□□□□ -0.04
TRAF1-201ENST00000373887 FAM25CB3EWG5 89 aa14.78□□□□□ -0.04
TRAF1-201ENST00000373887 FAM25GB3EWG6 89 aa14.78□□□□□ -0.04
TRAF1-201ENST00000373887 GSTM1P09488 218 aa14.78□□□□□ -0.04
TRAF1-201ENST00000373887 CIPCQ9C0C6 399 aa14.78□□□□□ -0.04
TRAF1-201ENST00000373887 SLC40A1Q9NP59 571 aa14.78□□□□□ -0.04
TRAF1-201ENST00000373887 LRRIQ1Q96JM4 1722 aa14.78□□□□□ -0.04
TRAF1-201ENST00000373887 CPSF4O95639 269 aaKnown RBP14.78□□□□□ -0.04
TRAF1-201ENST00000373887 SLC18A3Q16572 532 aa14.78□□□□□ -0.04
TRAF1-201ENST00000373887 TRIM65Q6PJ69 517 aa14.78□□□□□ -0.04
TRAF1-201ENST00000373887 C16orf62Q7Z3J2 963 aa14.78□□□□□ -0.04
TRAF1-201ENST00000373887 OOSP2Q86WS3 158 aa14.78□□□□□ -0.04
TRAF1-201ENST00000373887 IFNLR1Q8IU57 520 aaPredicted RBP14.78□□□□□ -0.04
TRAF1-201ENST00000373887 ATP6V0D2Q8N8Y2 350 aa14.78□□□□□ -0.04
TRAF1-201ENST00000373887 GINS4Q9BRT9 223 aa14.78□□□□□ -0.04
TRAF1-201ENST00000373887 MYPNQ86TC9 1320 aa14.78□□□□□ -0.04
TRAF1-201ENST00000373887 ALDH2P05091 517 aa14.78□□□□□ -0.04
TRAF1-201ENST00000373887 COMTP21964 271 aa14.78□□□□□ -0.04
TRAF1-201ENST00000373887 ACAT1P24752 427 aaKnown RBP14.78□□□□□ -0.04
TRAF1-201ENST00000373887 SLC11A2P49281 568 aa14.78□□□□□ -0.04
TRAF1-201ENST00000373887 ERVK-9P63128 1117 aa14.78□□□□□ -0.04
TRAF1-201ENST00000373887 ERVK-24P63145 666 aa14.78□□□□□ -0.04
TRAF1-201ENST00000373887 MAGED4Q96JG8 741 aa14.78□□□□□ -0.04
TRAF1-201ENST00000373887 COQ7Q99807 217 aa14.78□□□□□ -0.04
TRAF1-201ENST00000373887 ROGDIQ9GZN7 287 aa14.78□□□□□ -0.04
TRAF1-201ENST00000373887 NMRK2Q9NPI5 230 aa14.78□□□□□ -0.04
TRAF1-201ENST00000373887 RNF112Q9ULX5 631 aa14.78□□□□□ -0.04
TRAF1-201ENST00000373887 AGLP35573 1532 aa14.78□□□□□ -0.04
TRAF1-201ENST00000373887 CNTNAP2Q9UHC6 1331 aa14.78□□□□□ -0.04
TRAF1-201ENST00000373887 ALDH1A2O94788 518 aa14.77□□□□□ -0.04
TRAF1-201ENST00000373887 CKBP12277 381 aa14.77□□□□□ -0.04
TRAF1-201ENST00000373887 COX10Q12887 443 aa14.77□□□□□ -0.04
TRAF1-201ENST00000373887 FGFR2P21802 821 aa14.77□□□□□ -0.04
TRAF1-201ENST00000373887 NAMPTP43490 491 aa14.77□□□□□ -0.04
TRAF1-201ENST00000373887 COPAP53621 1224 aa14.77□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms