RNA–Protein interactions for RNA: ENST00000373556.7

HDAC8-202, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-202ENST00000373556 SGSM1Q2NKQ1 1148 aa17.09■□□□□ 0.33
HDAC8-202ENST00000373556 C1orf220Q5T0J3 134 aa17.09■□□□□ 0.33
HDAC8-202ENST00000373556 SNX30Q5VWJ9 437 aa17.09■□□□□ 0.33
HDAC8-202ENST00000373556 SV2AQ7L0J3 742 aa17.09■□□□□ 0.33
HDAC8-202ENST00000373556 BBS7Q8IWZ6 715 aa17.09■□□□□ 0.33
HDAC8-202ENST00000373556 NAT16Q8N8M0 369 aa17.09■□□□□ 0.33
HDAC8-202ENST00000373556 C12orf29Q8N999 325 aa17.09■□□□□ 0.33
HDAC8-202ENST00000373556 IL17RCQ8NAC3 791 aa17.09■□□□□ 0.33
HDAC8-202ENST00000373556 DDX1Q92499 740 aaKnown RBP17.09■□□□□ 0.33
HDAC8-202ENST00000373556 CNOT6LQ96LI5 555 aaKnown RBP17.09■□□□□ 0.33
HDAC8-202ENST00000373556 IL37Q9NZH6 218 aa17.09■□□□□ 0.33
HDAC8-202ENST00000373556 TBC1D14Q9P2M4 693 aa17.09■□□□□ 0.33
HDAC8-202ENST00000373556 CIZ1Q9ULV3 898 aaPredicted RBP17.09■□□□□ 0.33
HDAC8-202ENST00000373556 SH3BP1Q9Y3L3 701 aa17.09■□□□□ 0.33
HDAC8-202ENST00000373556 MAP1BP46821 2468 aaKnown RBP17.09■□□□□ 0.33
HDAC8-202ENST00000373556 CAVIN2O95810 425 aa17.08■□□□□ 0.32
HDAC8-202ENST00000373556 HLA-DRAP01903 254 aa17.08■□□□□ 0.32
HDAC8-202ENST00000373556 RPN1P04843 607 aaKnown RBP17.08■□□□□ 0.32
HDAC8-202ENST00000373556 ZDHHC11BP0C7U3 371 aa17.08■□□□□ 0.32
HDAC8-202ENST00000373556 PRR29P0C7W0 189 aa17.08■□□□□ 0.32
HDAC8-202ENST00000373556 CMA1P23946 247 aa17.08■□□□□ 0.32
HDAC8-202ENST00000373556 ADORA2BP29275 332 aa17.08■□□□□ 0.32
HDAC8-202ENST00000373556 EIF2DP41214 584 aaKnown RBP17.08■□□□□ 0.32
HDAC8-202ENST00000373556 PIK3CAP42336 1068 aa17.08■□□□□ 0.32
HDAC8-202ENST00000373556 PMS2CLQ68D20 193 aa17.08■□□□□ 0.32
HDAC8-202ENST00000373556 RNF43Q68DV7 783 aa17.08■□□□□ 0.32
HDAC8-202ENST00000373556 PHTF2Q8N3S3 785 aa17.08■□□□□ 0.32
HDAC8-202ENST00000373556 TMC2Q8TDI7 906 aa17.08■□□□□ 0.32
HDAC8-202ENST00000373556 TMEM174Q8WUU8 243 aa17.08■□□□□ 0.32
HDAC8-202ENST00000373556 RLN3Q8WXF3 142 aa17.08■□□□□ 0.32
HDAC8-202ENST00000373556 JAKMIP2Q96AA8 810 aa17.08■□□□□ 0.32
HDAC8-202ENST00000373556 NACA2Q9H009 215 aa17.08■□□□□ 0.32
HDAC8-202ENST00000373556 HPSEQ9Y251 543 aa17.08■□□□□ 0.32
HDAC8-202ENST00000373556 FRMD4BQ9Y2L6 1034 aa17.08■□□□□ 0.32
HDAC8-202ENST00000373556 MYO18AQ92614 2054 aaKnown RBP17.08■□□□□ 0.32
HDAC8-202ENST00000373556 FAM92AA1XBS5 289 aa17.07■□□□□ 0.32
HDAC8-202ENST00000373556 TBX18O95935 607 aa17.07■□□□□ 0.32
HDAC8-202ENST00000373556 ASS1P00966 412 aaKnown RBP17.07■□□□□ 0.32
HDAC8-202ENST00000373556 GRIA2P42262 883 aa17.07■□□□□ 0.32
HDAC8-202ENST00000373556 KIR2DL1P43626 348 aaPredicted RBP17.07■□□□□ 0.32
HDAC8-202ENST00000373556 TUBP50607 506 aa17.07■□□□□ 0.32
HDAC8-202ENST00000373556 GAD2Q05329 585 aa17.07■□□□□ 0.32
HDAC8-202ENST00000373556 N4BP2L1Q5TBK1 243 aaPredicted RBP17.07■□□□□ 0.32
HDAC8-202ENST00000373556 GPRIN1Q7Z2K8 1008 aa17.07■□□□□ 0.32
HDAC8-202ENST00000373556 TMEM25Q86YD3 366 aa17.07■□□□□ 0.32
HDAC8-202ENST00000373556 CRYBG2Q8N1P7 616 aa17.07■□□□□ 0.32
HDAC8-202ENST00000373556 TAF4BQ92750 862 aa17.07■□□□□ 0.32
HDAC8-202ENST00000373556 OTUB2Q96DC9 234 aa17.07■□□□□ 0.32
HDAC8-202ENST00000373556 SPATA32Q96LK8 384 aa17.07■□□□□ 0.32
HDAC8-202ENST00000373556 TWNKQ96RR1 684 aa17.07■□□□□ 0.32
HDAC8-202ENST00000373556 EDEM2Q9BV94 578 aa17.07■□□□□ 0.32
HDAC8-202ENST00000373556 CSNK1G1Q9HCP0 422 aa17.07■□□□□ 0.32
HDAC8-202ENST00000373556 COMMD8Q9NX08 183 aa17.07■□□□□ 0.32
HDAC8-202ENST00000373556 MAPK8IP1Q9UQF2 711 aa17.07■□□□□ 0.32
HDAC8-202ENST00000373556 A0A0A0MRY4 1105 aa17.06■□□□□ 0.32
HDAC8-202ENST00000373556 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.06■□□□□ 0.32
HDAC8-202ENST00000373556 IKBKBO14920 756 aa17.06■□□□□ 0.32
HDAC8-202ENST00000373556 CALUO43852 315 aaPredicted RBP17.06■□□□□ 0.32
HDAC8-202ENST00000373556 TLR5O60602 858 aa17.06■□□□□ 0.32
HDAC8-202ENST00000373556 ADAM23O75077 832 aa17.06■□□□□ 0.32
HDAC8-202ENST00000373556 ALDH1A2O94788 518 aa17.06■□□□□ 0.32
HDAC8-202ENST00000373556 TRIM49P0CI25 452 aa17.06■□□□□ 0.32
HDAC8-202ENST00000373556 TRIM49CP0CI26 452 aa17.06■□□□□ 0.32
HDAC8-202ENST00000373556 DHPSP49366 369 aaPredicted RBP17.06■□□□□ 0.32
HDAC8-202ENST00000373556 VAMP7P51809 220 aa17.06■□□□□ 0.32
HDAC8-202ENST00000373556 ANO4Q32M45 955 aa17.06■□□□□ 0.32
HDAC8-202ENST00000373556 BTBD8Q5XKL5 378 aa17.06■□□□□ 0.32
HDAC8-202ENST00000373556 UNC93AQ86WB7 457 aa17.06■□□□□ 0.32
HDAC8-202ENST00000373556 ETFBKMTQ8IXQ9 262 aa17.06■□□□□ 0.32
HDAC8-202ENST00000373556 FRMD1Q8N878 549 aa17.06■□□□□ 0.32
HDAC8-202ENST00000373556 OLIG1Q8TAK6 271 aa17.06■□□□□ 0.32
HDAC8-202ENST00000373556 HMGB4Q8WW32 186 aa17.06■□□□□ 0.32
HDAC8-202ENST00000373556 MMRN2Q9H8L6 949 aa17.06■□□□□ 0.32
HDAC8-202ENST00000373556 SPHK2Q9NRA0 654 aa17.06■□□□□ 0.32
HDAC8-202ENST00000373556 BCCIPQ9P287 314 aaKnown RBP eCLIP17.06■□□□□ 0.32
HDAC8-202ENST00000373556 USP25Q9UHP3 1055 aa17.06■□□□□ 0.32
HDAC8-202ENST00000373556 TRAF3IP3Q9Y228 551 aa17.06■□□□□ 0.32
HDAC8-202ENST00000373556 TCRBV21S2A2A0A5A6 115 aa17.05■□□□□ 0.32
HDAC8-202ENST00000373556 LNP1A1A4G5 178 aa17.05■□□□□ 0.32
HDAC8-202ENST00000373556 TBC1D3BA6NDS4 549 aa17.05■□□□□ 0.32
HDAC8-202ENST00000373556 C4orf47A7E2U8 309 aa17.05■□□□□ 0.32
HDAC8-202ENST00000373556 PATE3B3GLJ2 98 aa17.05■□□□□ 0.32
HDAC8-202ENST00000373556 TRIM24O15164 1050 aa17.05■□□□□ 0.32
HDAC8-202ENST00000373556 CYP26A1O43174 497 aa17.05■□□□□ 0.32
HDAC8-202ENST00000373556 HOXC11O43248 304 aaPredicted RBP17.05■□□□□ 0.32
HDAC8-202ENST00000373556 TULP3O75386 442 aa17.05■□□□□ 0.32
HDAC8-202ENST00000373556 MYL1P05976 194 aa17.05■□□□□ 0.32
HDAC8-202ENST00000373556 FAM200BP0CF97 657 aa17.05■□□□□ 0.32
HDAC8-202ENST00000373556 NR2F2P24468 414 aa17.05■□□□□ 0.32
HDAC8-202ENST00000373556 TNFRSF4P43489 277 aa17.05■□□□□ 0.32
HDAC8-202ENST00000373556 GCLMP48507 274 aa17.05■□□□□ 0.32
HDAC8-202ENST00000373556 NDUFA8P51970 172 aa17.05■□□□□ 0.32
HDAC8-202ENST00000373556 PPP3CAQ08209 521 aa17.05■□□□□ 0.32
HDAC8-202ENST00000373556 EOGTQ5NDL2 527 aa17.05■□□□□ 0.32
HDAC8-202ENST00000373556 CLEC20AQ6ZU45 233 aa17.05■□□□□ 0.32
HDAC8-202ENST00000373556 CYP2U1Q7Z449 544 aa17.05■□□□□ 0.32
HDAC8-202ENST00000373556 C11orf74Q86VG3 221 aa17.05■□□□□ 0.32
HDAC8-202ENST00000373556 TAS1R2Q8TE23 839 aa17.05■□□□□ 0.32
HDAC8-202ENST00000373556 LSM14BQ9BX40 385 aaKnown RBP17.05■□□□□ 0.32
HDAC8-202ENST00000373556 FBXO44Q9H4M3 255 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms