RNA–Protein interactions for RNA: ENST00000372246.7

ATG4A-204, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4A, Length 2,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-204ENST00000372246 PSMD7P51665 324 aa5.64□□□□□ -1.51
ATG4A-204ENST00000372246 RPL10AP62906 217 aaKnown RBP5.64□□□□□ -1.51
ATG4A-204ENST00000372246 MYLK3Q32MK0 819 aa5.64□□□□□ -1.51
ATG4A-204ENST00000372246 MMEL1Q495T6 779 aa5.64□□□□□ -1.51
ATG4A-204ENST00000372246 NADK2Q4G0N4 442 aa5.64□□□□□ -1.51
ATG4A-204ENST00000372246 RABGAP1LQ5R372 815 aa5.64□□□□□ -1.51
ATG4A-204ENST00000372246 C6orf52Q5T4I8 152 aa5.64□□□□□ -1.51
ATG4A-204ENST00000372246 KRT39Q6A163 491 aa5.64□□□□□ -1.51
ATG4A-204ENST00000372246 PRR5LQ6MZQ0 368 aa5.64□□□□□ -1.51
ATG4A-204ENST00000372246 KLHDC10Q6PID8 442 aa5.64□□□□□ -1.51
ATG4A-204ENST00000372246 SPOCD1Q6ZMY3 1216 aa5.64□□□□□ -1.51
ATG4A-204ENST00000372246 GET4Q7L5D6 327 aaPredicted RBP5.64□□□□□ -1.51
ATG4A-204ENST00000372246 DPH6Q7L8W6 267 aa5.64□□□□□ -1.51
ATG4A-204ENST00000372246 MIER3Q7Z3K6 550 aa5.64□□□□□ -1.51
ATG4A-204ENST00000372246 LCA5Q86VQ0 697 aa5.64□□□□□ -1.51
ATG4A-204ENST00000372246 MYLK4Q86YV6 388 aaPredicted RBP5.64□□□□□ -1.51
ATG4A-204ENST00000372246 MPP5Q8N3R9 675 aa5.64□□□□□ -1.51
ATG4A-204ENST00000372246 ARFGAP1Q8N6T3 406 aa5.64□□□□□ -1.51
ATG4A-204ENST00000372246 SNX31Q8N9S9 440 aa5.64□□□□□ -1.51
ATG4A-204ENST00000372246 JOSD2Q8TAC2 188 aa5.64□□□□□ -1.51
ATG4A-204ENST00000372246 CCDC110Q8TBZ0 833 aa5.64□□□□□ -1.51
ATG4A-204ENST00000372246 PRPF31Q8WWY3 499 aaKnown RBP5.64□□□□□ -1.51
ATG4A-204ENST00000372246 ATXN7L3BQ96GX2 97 aa5.64□□□□□ -1.51
ATG4A-204ENST00000372246 MARK4Q96L34 752 aa5.64□□□□□ -1.51
ATG4A-204ENST00000372246 NACC1Q96RE7 527 aa5.64□□□□□ -1.51
ATG4A-204ENST00000372246 ZNF358Q9NW07 568 aa5.64□□□□□ -1.51
ATG4A-204ENST00000372246 CHCHD3Q9NX63 227 aaKnown RBP5.64□□□□□ -1.51
ATG4A-204ENST00000372246 ZNF212Q9UDV6 495 aa5.64□□□□□ -1.51
ATG4A-204ENST00000372246 NARFQ9UHQ1 456 aa5.64□□□□□ -1.51
ATG4A-204ENST00000372246 PCDHB4Q9Y5E5 795 aa5.64□□□□□ -1.51
ATG4A-204ENST00000372246 ACTL7BQ9Y614 415 aa5.64□□□□□ -1.51
ATG4A-204ENST00000372246 LAMB2P55268 1798 aa5.64□□□□□ -1.51
ATG4A-204ENST00000372246 NHSQ6T4R5 1651 aa5.64□□□□□ -1.51
ATG4A-204ENST00000372246 CDK5RAP2Q96SN8 1893 aa5.64□□□□□ -1.51
ATG4A-204ENST00000372246 A0A0J9YVX5 310 aa5.64□□□□□ -1.51
ATG4A-204ENST00000372246 TM7SF2O76062 418 aa5.64□□□□□ -1.51
ATG4A-204ENST00000372246 ZWINTO95229 277 aa5.64□□□□□ -1.51
ATG4A-204ENST00000372246 AMHP03971 560 aa5.64□□□□□ -1.51
ATG4A-204ENST00000372246 TFAP2AP05549 437 aa5.64□□□□□ -1.51
ATG4A-204ENST00000372246 WEE2P0C1S8 567 aa5.64□□□□□ -1.51
ATG4A-204ENST00000372246 NAT1P18440 290 aa5.64□□□□□ -1.51
ATG4A-204ENST00000372246 EIF2AK2P19525 551 aaKnown RBP5.64□□□□□ -1.51
ATG4A-204ENST00000372246 CPOXP36551 454 aa5.64□□□□□ -1.51
ATG4A-204ENST00000372246 STT3AP46977 705 aa5.64□□□□□ -1.51
ATG4A-204ENST00000372246 CCR3P51677 355 aa5.64□□□□□ -1.51
ATG4A-204ENST00000372246 GTF2A2P52657 109 aa5.64□□□□□ -1.51
ATG4A-204ENST00000372246 NLRP11P59045 1033 aaKnown RBP5.64□□□□□ -1.51
ATG4A-204ENST00000372246 ACTR3P61158 418 aa5.64□□□□□ -1.51
ATG4A-204ENST00000372246 PLOD1Q02809 727 aaPredicted RBP5.64□□□□□ -1.51
ATG4A-204ENST00000372246 FOLH1Q04609 750 aa5.64□□□□□ -1.51
ATG4A-204ENST00000372246 FOXD4Q12950 439 aaPredicted RBP5.64□□□□□ -1.51
ATG4A-204ENST00000372246 AP3B2Q13367 1082 aa5.64□□□□□ -1.51
ATG4A-204ENST00000372246 PDK3Q15120 406 aa5.64□□□□□ -1.51
ATG4A-204ENST00000372246 OASLQ15646 514 aaKnown RBP5.64□□□□□ -1.51
ATG4A-204ENST00000372246 ANKDD1AQ495B1 522 aa5.64□□□□□ -1.51
ATG4A-204ENST00000372246 KCTD21Q4G0X4 260 aa5.64□□□□□ -1.51
ATG4A-204ENST00000372246 CEP55Q53EZ4 464 aa5.64□□□□□ -1.51
ATG4A-204ENST00000372246 XKR9Q5GH70 373 aa5.64□□□□□ -1.51
ATG4A-204ENST00000372246 TDRD10Q5VZ19 366 aaKnown RBP5.64□□□□□ -1.51
ATG4A-204ENST00000372246 RSBN1LQ6PCB5 846 aaPredicted RBP5.64□□□□□ -1.51
ATG4A-204ENST00000372246 CEP128Q6ZU80 1094 aa5.64□□□□□ -1.51
ATG4A-204ENST00000372246 MAVSQ7Z434 540 aa5.64□□□□□ -1.51
ATG4A-204ENST00000372246 AMIGO2Q86SJ2 522 aa5.64□□□□□ -1.51
ATG4A-204ENST00000372246 CDR2LQ86X02 465 aaPredicted RBP5.64□□□□□ -1.51
ATG4A-204ENST00000372246 PDSS2Q86YH6 399 aa5.64□□□□□ -1.51
ATG4A-204ENST00000372246 OR5B17Q8NGF7 314 aa5.64□□□□□ -1.51
ATG4A-204ENST00000372246 HSPH1Q92598 858 aa5.64□□□□□ -1.51
ATG4A-204ENST00000372246 USP13Q92995 863 aaPredicted RBP5.64□□□□□ -1.51
ATG4A-204ENST00000372246 BICD1Q96G01 975 aa5.64□□□□□ -1.51
ATG4A-204ENST00000372246 TTC25Q96NG3 672 aa5.64□□□□□ -1.51
ATG4A-204ENST00000372246 ACCSQ96QU6 501 aa5.64□□□□□ -1.51
ATG4A-204ENST00000372246 HAPLN2Q9GZV7 340 aa5.64□□□□□ -1.51
ATG4A-204ENST00000372246 TDRD3Q9H7E2 651 aaKnown RBP5.64□□□□□ -1.51
ATG4A-204ENST00000372246 PLAC1Q9HBJ0 212 aa5.64□□□□□ -1.51
ATG4A-204ENST00000372246 USP29Q9HBJ7 922 aa5.64□□□□□ -1.51
ATG4A-204ENST00000372246 KCNH7Q9NS40 1196 aa5.64□□□□□ -1.51
ATG4A-204ENST00000372246 PNPOQ9NVS9 261 aa5.64□□□□□ -1.51
ATG4A-204ENST00000372246 ATXN10Q9UBB4 475 aa5.64□□□□□ -1.51
ATG4A-204ENST00000372246 ZNRF3Q9ULT6 936 aa5.64□□□□□ -1.51
ATG4A-204ENST00000372246 DOLKQ9UPQ8 538 aa5.64□□□□□ -1.51
ATG4A-204ENST00000372246 AGTPBP1Q9UPW5 1226 aa5.64□□□□□ -1.51
ATG4A-204ENST00000372246 INPP5FQ9Y2H2 1132 aa5.64□□□□□ -1.51
ATG4A-204ENST00000372246 ZNF711Q9Y462 761 aa5.64□□□□□ -1.51
ATG4A-204ENST00000372246 KIF13BQ9NQT8 1826 aa5.63□□□□□ -1.51
ATG4A-204ENST00000372246 hCG_1818297A0A087WSY0 165 aa5.63□□□□□ -1.51
ATG4A-204ENST00000372246 C15orf38-AP3S2A0A0A6YYH1 394 aa5.63□□□□□ -1.51
ATG4A-204ENST00000372246 GOLGA8QA0A0J9YX86 632 aa5.63□□□□□ -1.51
ATG4A-204ENST00000372246 GOLGA8OA6NCC3 632 aa5.63□□□□□ -1.51
ATG4A-204ENST00000372246 SPECC1L-ADORA2AF8WAN1 911 aa5.63□□□□□ -1.51
ATG4A-204ENST00000372246 GOLGA8NF8WBI6 632 aa5.63□□□□□ -1.51
ATG4A-204ENST00000372246 HNRNPDLO14979 420 aaKnown RBP5.63□□□□□ -1.51
ATG4A-204ENST00000372246 GRAP2O75791 330 aa5.63□□□□□ -1.51
ATG4A-204ENST00000372246 VNN1O95497 513 aa5.63□□□□□ -1.51
ATG4A-204ENST00000372246 CST3P01034 146 aaPredicted RBP5.63□□□□□ -1.51
ATG4A-204ENST00000372246 HLA-DRAP01903 254 aa5.63□□□□□ -1.51
ATG4A-204ENST00000372246 LMNAP02545 664 aaKnown RBP5.63□□□□□ -1.51
ATG4A-204ENST00000372246 GSTA2P09210 222 aa5.63□□□□□ -1.51
ATG4A-204ENST00000372246 CSH1P0DML2 217 aa5.63□□□□□ -1.51
ATG4A-204ENST00000372246 CSH2P0DML3 217 aa5.63□□□□□ -1.51
ATG4A-204ENST00000372246 MYCLP12524 364 aaPredicted RBP5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms