RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 SENP6Q9GZR1 1112 aaPredicted RBP13.78□□□□□ -0.2
RAPGEF1-201ENST00000372189 KLHL20Q9Y2M5 609 aa13.78□□□□□ -0.2
RAPGEF1-201ENST00000372189 ZNF410Q86VK4 478 aa13.77□□□□□ -0.2
RAPGEF1-201ENST00000372189 AGR3Q8TD06 166 aa13.77□□□□□ -0.2
RAPGEF1-201ENST00000372189 EME1Q96AY2 570 aa13.77□□□□□ -0.2
RAPGEF1-201ENST00000372189 TRPM5Q9NZQ8 1165 aa13.77□□□□□ -0.2
RAPGEF1-201ENST00000372189 PHLPP1O60346 1717 aa13.77□□□□□ -0.2
RAPGEF1-201ENST00000372189 B2RBV5 119 aa13.77□□□□□ -0.2
RAPGEF1-201ENST00000372189 SERPINB3P29508 390 aa13.77□□□□□ -0.2
RAPGEF1-201ENST00000372189 RHBDL3P58872 404 aa13.77□□□□□ -0.2
RAPGEF1-201ENST00000372189 BTG3Q14201 252 aaPredicted RBP13.77□□□□□ -0.2
RAPGEF1-201ENST00000372189 ZNF720Q7Z2F6 126 aa13.77□□□□□ -0.2
RAPGEF1-201ENST00000372189 C9orf72Q96LT7 481 aa13.77□□□□□ -0.2
RAPGEF1-201ENST00000372189 CBWD1Q9BRT8 395 aa13.77□□□□□ -0.2
RAPGEF1-201ENST00000372189 DLGAP2Q9P1A6 1054 aa13.77□□□□□ -0.2
RAPGEF1-201ENST00000372189 XPO7Q9UIA9 1087 aaKnown RBP13.77□□□□□ -0.2
RAPGEF1-201ENST00000372189 KLK7P49862 253 aa13.77□□□□□ -0.21
RAPGEF1-201ENST00000372189 TOB1P50616 345 aaPredicted RBP13.77□□□□□ -0.21
RAPGEF1-201ENST00000372189 SOX10P56693 466 aa13.77□□□□□ -0.21
RAPGEF1-201ENST00000372189 BEX3Q00994 111 aa13.77□□□□□ -0.21
RAPGEF1-201ENST00000372189 CENPCQ03188 943 aa13.77□□□□□ -0.21
RAPGEF1-201ENST00000372189 ORC1Q13415 861 aa13.77□□□□□ -0.21
RAPGEF1-201ENST00000372189 TRIP10Q15642 601 aa13.77□□□□□ -0.21
RAPGEF1-201ENST00000372189 RTL3Q8N8U3 475 aaKnown RBP13.77□□□□□ -0.21
RAPGEF1-201ENST00000372189 SERPINB12Q96P63 405 aa13.77□□□□□ -0.21
RAPGEF1-201ENST00000372189 ADNPQ9H2P0 1102 aa13.77□□□□□ -0.21
RAPGEF1-201ENST00000372189 EVLQ9UI08 416 aaPredicted RBP13.77□□□□□ -0.21
RAPGEF1-201ENST00000372189 ITGA11Q9UKX5 1188 aa13.77□□□□□ -0.21
RAPGEF1-201ENST00000372189 MYO5BQ9ULV0 1848 aa13.77□□□□□ -0.21
RAPGEF1-201ENST00000372189 MAGEA13PA6NCF6 341 aa13.77□□□□□ -0.21
RAPGEF1-201ENST00000372189 POMCP01189 267 aa13.77□□□□□ -0.21
RAPGEF1-201ENST00000372189 DNAJB2P25686 324 aa13.77□□□□□ -0.21
RAPGEF1-201ENST00000372189 ETFBP38117 255 aa13.77□□□□□ -0.21
RAPGEF1-201ENST00000372189 MAGEA4P43358 317 aa13.77□□□□□ -0.21
RAPGEF1-201ENST00000372189 GRIK5Q16478 980 aa13.77□□□□□ -0.21
RAPGEF1-201ENST00000372189 ITIH5Q86UX2 942 aa13.77□□□□□ -0.21
RAPGEF1-201ENST00000372189 MKL1Q969V6 931 aa13.77□□□□□ -0.21
RAPGEF1-201ENST00000372189 MAML3Q96JK9 1138 aa13.77□□□□□ -0.21
RAPGEF1-201ENST00000372189 M0QYT0 321 aa13.77□□□□□ -0.21
RAPGEF1-201ENST00000372189 PCSK7Q16549 785 aa13.77□□□□□ -0.21
RAPGEF1-201ENST00000372189 TMC2Q8TDI7 906 aa13.77□□□□□ -0.21
RAPGEF1-201ENST00000372189 MRPL9Q9BYD2 267 aaKnown RBP13.77□□□□□ -0.21
RAPGEF1-201ENST00000372189 SLC30A1Q9Y6M5 507 aa13.77□□□□□ -0.21
RAPGEF1-201ENST00000372189 TMEM88BA6NKF7 163 aa13.76□□□□□ -0.21
RAPGEF1-201ENST00000372189 FAM86B1E9PN63 330 aa13.76□□□□□ -0.21
RAPGEF1-201ENST00000372189 F5H5T6 163 aa13.76□□□□□ -0.21
RAPGEF1-201ENST00000372189 FAM86B2P0C5J1 330 aa13.76□□□□□ -0.21
RAPGEF1-201ENST00000372189 MAPTP10636 758 aaKnown RBP13.76□□□□□ -0.21
RAPGEF1-201ENST00000372189 TUBA4AP68366 448 aa13.76□□□□□ -0.21
RAPGEF1-201ENST00000372189 CYP24A1Q07973 514 aa13.76□□□□□ -0.21
RAPGEF1-201ENST00000372189 SUZ12Q15022 739 aaKnown RBP13.76□□□□□ -0.21
RAPGEF1-201ENST00000372189 TRIM16LQ309B1 348 aa13.76□□□□□ -0.21
RAPGEF1-201ENST00000372189 TBC1D19Q8N5T2 526 aa13.76□□□□□ -0.21
RAPGEF1-201ENST00000372189 ENGASEQ8NFI3 743 aa13.76□□□□□ -0.21
RAPGEF1-201ENST00000372189 FOPNLQ96NB1 174 aa13.76□□□□□ -0.21
RAPGEF1-201ENST00000372189 ZC3H7BQ9UGR2 993 aaKnown RBP13.76□□□□□ -0.21
RAPGEF1-201ENST00000372189 WTIPA6NIX2 430 aaPredicted RBP13.76□□□□□ -0.21
RAPGEF1-201ENST00000372189 ZNF197O14709 1029 aa13.76□□□□□ -0.21
RAPGEF1-201ENST00000372189 CSDE1O75534 798 aaKnown RBP13.76□□□□□ -0.21
RAPGEF1-201ENST00000372189 UBTFL6P0CB48 400 aaPredicted RBP13.76□□□□□ -0.21
RAPGEF1-201ENST00000372189 FCHO2Q0JRZ9 810 aa13.76□□□□□ -0.21
RAPGEF1-201ENST00000372189 PTK7Q13308 1070 aa13.76□□□□□ -0.21
RAPGEF1-201ENST00000372189 NTRK3Q16288 839 aa13.76□□□□□ -0.21
RAPGEF1-201ENST00000372189 ZC3H12BQ5HYM0 836 aaKnown RBP13.76□□□□□ -0.21
RAPGEF1-201ENST00000372189 ACAD10Q6JQN1 1059 aa13.76□□□□□ -0.21
RAPGEF1-201ENST00000372189 LVRNQ6Q4G3 990 aa13.76□□□□□ -0.21
RAPGEF1-201ENST00000372189 UCMAQ8WVF2 138 aa13.76□□□□□ -0.21
RAPGEF1-201ENST00000372189 CINPQ9BW66 212 aaPredicted RBP13.76□□□□□ -0.21
RAPGEF1-201ENST00000372189 DDIT4Q9NX09 232 aa13.76□□□□□ -0.21
RAPGEF1-201ENST00000372189 ATMINO43313 823 aaPredicted RBP13.76□□□□□ -0.21
RAPGEF1-201ENST00000372189 AKAP10O43572 662 aa13.76□□□□□ -0.21
RAPGEF1-201ENST00000372189 PLD1Q13393 1074 aa13.76□□□□□ -0.21
RAPGEF1-201ENST00000372189 SLC27A1Q6PCB7 646 aa13.76□□□□□ -0.21
RAPGEF1-201ENST00000372189 WNK4Q96J92 1243 aa13.76□□□□□ -0.21
RAPGEF1-201ENST00000372189 SYT17Q9BSW7 474 aa13.76□□□□□ -0.21
RAPGEF1-201ENST00000372189 MANSC1Q9H8J5 431 aa13.76□□□□□ -0.21
RAPGEF1-201ENST00000372189 ATPIF1Q9UII2 106 aa13.76□□□□□ -0.21
RAPGEF1-201ENST00000372189 BLOC1S6Q9UL45 172 aa13.76□□□□□ -0.21
RAPGEF1-201ENST00000372189 TTLL13PA6NNM8 815 aa13.76□□□□□ -0.21
RAPGEF1-201ENST00000372189 MYO1DO94832 1006 aa13.76□□□□□ -0.21
RAPGEF1-201ENST00000372189 NQO1P15559 274 aaKnown RBP13.76□□□□□ -0.21
RAPGEF1-201ENST00000372189 RAP1GAPP47736 663 aa13.76□□□□□ -0.21
RAPGEF1-201ENST00000372189 LBRQ14739 615 aaKnown RBP13.76□□□□□ -0.21
RAPGEF1-201ENST00000372189 CRY2Q49AN0 593 aa13.76□□□□□ -0.21
RAPGEF1-201ENST00000372189 EMILIN2Q9BXX0 1053 aa13.76□□□□□ -0.21
RAPGEF1-201ENST00000372189 NR2E3Q9Y5X4 410 aa13.76□□□□□ -0.21
RAPGEF1-201ENST00000372189 GLTPD2A6NH11 291 aa13.76□□□□□ -0.21
RAPGEF1-201ENST00000372189 CKMP06732 381 aa13.76□□□□□ -0.21
RAPGEF1-201ENST00000372189 PYGLP06737 847 aa13.76□□□□□ -0.21
RAPGEF1-201ENST00000372189 HSPA1AP0DMV8 641 aaKnown RBP13.76□□□□□ -0.21
RAPGEF1-201ENST00000372189 HSPA1BP0DMV9 641 aaKnown RBP13.76□□□□□ -0.21
RAPGEF1-201ENST00000372189 CXCL8P10145 99 aa13.76□□□□□ -0.21
RAPGEF1-201ENST00000372189 BCAT1P54687 386 aa13.76□□□□□ -0.21
RAPGEF1-201ENST00000372189 AP1S2P56377 157 aa13.76□□□□□ -0.21
RAPGEF1-201ENST00000372189 TTC39BQ5VTQ0 682 aaPredicted RBP13.76□□□□□ -0.21
RAPGEF1-201ENST00000372189 GPR142Q7Z601 462 aa13.76□□□□□ -0.21
RAPGEF1-201ENST00000372189 MYCBPAPQ8TBZ2 947 aa13.76□□□□□ -0.21
RAPGEF1-201ENST00000372189 TMA16Q96EY4 203 aaKnown RBP13.76□□□□□ -0.21
RAPGEF1-201ENST00000372189 ERGIC2Q96RQ1 377 aa13.76□□□□□ -0.21
RAPGEF1-201ENST00000372189 PCDHAC2Q9Y5I4 1007 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms