RNA–Protein interactions for RNA: ENST00000372017.3

SNCG-202, Transcript of synuclein gamma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCG, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCG-202ENST00000372017 TRMT61BQ9BVS5 477 aaKnown RBP13.25□□□□□ -0.29
SNCG-202ENST00000372017 FBXO44Q9H4M3 255 aa13.25□□□□□ -0.29
SNCG-202ENST00000372017 CA14Q9ULX7 337 aa13.25□□□□□ -0.29
SNCG-202ENST00000372017 CKMP06732 381 aa13.24□□□□□ -0.29
SNCG-202ENST00000372017 LCP1P13796 627 aa13.24□□□□□ -0.29
SNCG-202ENST00000372017 SLC7A9P82251 487 aa13.24□□□□□ -0.29
SNCG-202ENST00000372017 ZNF268Q14587 947 aaPredicted RBP13.24□□□□□ -0.29
SNCG-202ENST00000372017 HECTD3Q5T447 861 aa13.24□□□□□ -0.29
SNCG-202ENST00000372017 TRIM68Q6AZZ1 485 aa13.24□□□□□ -0.29
SNCG-202ENST00000372017 NOP9Q86U38 636 aaKnown RBP13.24□□□□□ -0.29
SNCG-202ENST00000372017 PASD1Q8IV76 773 aa13.24□□□□□ -0.29
SNCG-202ENST00000372017 CELF5Q8N6W0 485 aaKnown RBP13.24□□□□□ -0.29
SNCG-202ENST00000372017 BPIFB1Q8TDL5 484 aa13.24□□□□□ -0.29
SNCG-202ENST00000372017 DEPDC1BQ8WUY9 529 aa13.24□□□□□ -0.29
SNCG-202ENST00000372017 KCNH6Q9H252 994 aa13.24□□□□□ -0.29
SNCG-202ENST00000372017 TSPY26PQ9H489 355 aa13.24□□□□□ -0.29
SNCG-202ENST00000372017 TLR8Q9NR97 1041 aaKnown RBP13.24□□□□□ -0.29
SNCG-202ENST00000372017 GKN1Q9NS71 199 aa13.24□□□□□ -0.29
SNCG-202ENST00000372017 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.24□□□□□ -0.29
SNCG-202ENST00000372017 OBP2AQ9NY56 170 aa13.24□□□□□ -0.29
SNCG-202ENST00000372017 ZMYM5Q9UJ78 669 aa13.24□□□□□ -0.29
SNCG-202ENST00000372017 PCDHGC3Q9UN70 934 aa13.24□□□□□ -0.29
SNCG-202ENST00000372017 ARHGAP26Q9UNA1 814 aa13.24□□□□□ -0.29
SNCG-202ENST00000372017 CPQQ9Y646 472 aa13.24□□□□□ -0.29
SNCG-202ENST00000372017 FAM170AA1A519 330 aa13.23□□□□□ -0.29
SNCG-202ENST00000372017 OTOL1A6NHN0 477 aaPredicted RBP13.23□□□□□ -0.29
SNCG-202ENST00000372017 YJEFN3A6XGL0 299 aa13.23□□□□□ -0.29
SNCG-202ENST00000372017 E7ENQ6 273 aa13.23□□□□□ -0.29
SNCG-202ENST00000372017 LEFTY2O00292 366 aa13.23□□□□□ -0.29
SNCG-202ENST00000372017 SCAMP3O14828 347 aaKnown RBP13.23□□□□□ -0.29
SNCG-202ENST00000372017 TLR5O60602 858 aa13.23□□□□□ -0.29
SNCG-202ENST00000372017 GFPT2O94808 682 aa13.23□□□□□ -0.29
SNCG-202ENST00000372017 RARGP13631 454 aa13.23□□□□□ -0.29
SNCG-202ENST00000372017 CYP11B1P15538 503 aa13.23□□□□□ -0.29
SNCG-202ENST00000372017 CHRNB2P17787 502 aa13.23□□□□□ -0.29
SNCG-202ENST00000372017 RFX1P22670 979 aa13.23□□□□□ -0.29
SNCG-202ENST00000372017 PBX1P40424 430 aa13.23□□□□□ -0.29
SNCG-202ENST00000372017 DAOAP59103 153 aa13.23□□□□□ -0.29
SNCG-202ENST00000372017 ZNF445P59923 1031 aa13.23□□□□□ -0.29
SNCG-202ENST00000372017 PTK2Q05397 1052 aa13.23□□□□□ -0.29
SNCG-202ENST00000372017 TNK2Q07912 1038 aa13.23□□□□□ -0.29
SNCG-202ENST00000372017 USP4Q13107 963 aa13.23□□□□□ -0.29
SNCG-202ENST00000372017 RNF214Q8ND24 703 aa13.23□□□□□ -0.29
SNCG-202ENST00000372017 NEK11Q8NG66 645 aa13.23□□□□□ -0.29
SNCG-202ENST00000372017 TTC8Q8TAM2 541 aa13.23□□□□□ -0.29
SNCG-202ENST00000372017 SH3RF2Q8TEC5 729 aa13.23□□□□□ -0.29
SNCG-202ENST00000372017 E2F7Q96AV8 911 aa13.23□□□□□ -0.29
SNCG-202ENST00000372017 CHFRQ96EP1 664 aa13.23□□□□□ -0.29
SNCG-202ENST00000372017 PCMTD1Q96MG8 357 aaPredicted RBP13.23□□□□□ -0.29
SNCG-202ENST00000372017 FAM83CQ9BQN1 747 aa13.23□□□□□ -0.29
SNCG-202ENST00000372017 SLC4A5Q9BY07 1137 aa13.23□□□□□ -0.29
SNCG-202ENST00000372017 LINC00597Q9H2U6 94 aa13.23□□□□□ -0.29
SNCG-202ENST00000372017 BRD9Q9H8M2 597 aa13.23□□□□□ -0.29
SNCG-202ENST00000372017 LRRC4Q9HBW1 653 aa13.23□□□□□ -0.29
SNCG-202ENST00000372017 CYLDQ9NQC7 956 aa13.23□□□□□ -0.29
SNCG-202ENST00000372017 HPS4Q9NQG7 708 aa13.23□□□□□ -0.29
SNCG-202ENST00000372017 HEBP1Q9NRV9 189 aa13.23□□□□□ -0.29
SNCG-202ENST00000372017 SMPD4Q9NXE4 827 aa13.23□□□□□ -0.29
SNCG-202ENST00000372017 WNT16Q9UBV4 365 aa13.23□□□□□ -0.29
SNCG-202ENST00000372017 NAGPAQ9UK23 515 aa13.23□□□□□ -0.29
SNCG-202ENST00000372017 ZNF318Q5VUA4 2279 aa13.23□□□□□ -0.29
SNCG-202ENST00000372017 DPYSL4O14531 572 aa13.22□□□□□ -0.29
SNCG-202ENST00000372017 ZNF263O14978 683 aa13.22□□□□□ -0.29
SNCG-202ENST00000372017 CHADO15335 359 aa13.22□□□□□ -0.29
SNCG-202ENST00000372017 MED7O43513 233 aa13.22□□□□□ -0.29
SNCG-202ENST00000372017 CAVIN2O95810 425 aa13.22□□□□□ -0.29
SNCG-202ENST00000372017 ZBED1O96006 694 aa13.22□□□□□ -0.29
SNCG-202ENST00000372017 SERPINC1P01008 464 aa13.22□□□□□ -0.29
SNCG-202ENST00000372017 MBL2P11226 248 aaPredicted RBP13.22□□□□□ -0.29
SNCG-202ENST00000372017 ARSAP15289 507 aa13.22□□□□□ -0.29
SNCG-202ENST00000372017 TCF3P15923 654 aa13.22□□□□□ -0.29
SNCG-202ENST00000372017 PFKLP17858 780 aa13.22□□□□□ -0.29
SNCG-202ENST00000372017 SOX5P35711 763 aa13.22□□□□□ -0.29
SNCG-202ENST00000372017 TUBP50607 506 aa13.22□□□□□ -0.29
SNCG-202ENST00000372017 SLC8A3P57103 927 aa13.22□□□□□ -0.29
SNCG-202ENST00000372017 YWHAGP61981 247 aaKnown RBP eCLIP13.22□□□□□ -0.29
SNCG-202ENST00000372017 MTF1Q14872 753 aa13.22□□□□□ -0.29
SNCG-202ENST00000372017 MEA1Q16626 185 aa13.22□□□□□ -0.29
SNCG-202ENST00000372017 SLC44A4Q53GD3 710 aa13.22□□□□□ -0.29
SNCG-202ENST00000372017 TAF3Q5VWG9 929 aa13.22□□□□□ -0.29
SNCG-202ENST00000372017 CWF19L1Q69YN2 538 aaKnown RBP13.22□□□□□ -0.29
SNCG-202ENST00000372017 SMYD5Q6GMV2 418 aa13.22□□□□□ -0.29
SNCG-202ENST00000372017 SCUBE3Q8IX30 993 aa13.22□□□□□ -0.29
SNCG-202ENST00000372017 SIX5Q8N196 739 aa13.22□□□□□ -0.29
SNCG-202ENST00000372017 C1orf131Q8NDD1 294 aaKnown RBP13.22□□□□□ -0.29
SNCG-202ENST00000372017 TTC16Q8NEE8 873 aa13.22□□□□□ -0.29
SNCG-202ENST00000372017 EPS8L1Q8TE68 723 aa13.22□□□□□ -0.29
SNCG-202ENST00000372017 SLC20A1Q8WUM9 679 aa13.22□□□□□ -0.29
SNCG-202ENST00000372017 BAP1Q92560 729 aa13.22□□□□□ -0.29
SNCG-202ENST00000372017 PIWIL1Q96J94 861 aaKnown RBP13.22□□□□□ -0.29
SNCG-202ENST00000372017 HSFY1Q96LI6 401 aa13.22□□□□□ -0.29
SNCG-202ENST00000372017 CPXM1Q96SM3 734 aa13.22□□□□□ -0.29
SNCG-202ENST00000372017 KLF16Q9BXK1 252 aaPredicted RBP13.22□□□□□ -0.29
SNCG-202ENST00000372017 TTYH3Q9C0H2 523 aa13.22□□□□□ -0.29
SNCG-202ENST00000372017 MIS12Q9H081 205 aa13.22□□□□□ -0.29
SNCG-202ENST00000372017 KIF9Q9HAQ2 790 aa13.22□□□□□ -0.29
SNCG-202ENST00000372017 GTSE1Q9NYZ3 720 aa13.22□□□□□ -0.29
SNCG-202ENST00000372017 NOCTQ9UK39 431 aaKnown RBP13.22□□□□□ -0.29
SNCG-202ENST00000372017 KMT2EQ8IZD2 1858 aa13.22□□□□□ -0.29
SNCG-202ENST00000372017 A0A1W2PQC6 194 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms