RNA–Protein interactions for RNA: ENST00000371319.7

SSBP3-203, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP3, Length 1,578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-203ENST00000371319 TSPY1Q01534 308 aa18.32■□□□□ 0.52
SSBP3-203ENST00000371319 YWHAHQ04917 246 aaPredicted RBP18.32■□□□□ 0.52
SSBP3-203ENST00000371319 BOLA3Q53S33 107 aa18.32■□□□□ 0.52
SSBP3-203ENST00000371319 OTUD1Q5VV17 481 aaPredicted RBP18.32■□□□□ 0.52
SSBP3-203ENST00000371319 SCYL2Q6P3W7 929 aa18.32■□□□□ 0.52
SSBP3-203ENST00000371319 FBXO46Q6PJ61 603 aaPredicted RBP18.32■□□□□ 0.52
SSBP3-203ENST00000371319 HFE2Q6ZVN8 426 aa18.32■□□□□ 0.52
SSBP3-203ENST00000371319 SYDE1Q6ZW31 735 aaPredicted RBP18.32■□□□□ 0.52
SSBP3-203ENST00000371319 BBS12Q6ZW61 710 aa18.32■□□□□ 0.52
SSBP3-203ENST00000371319 NPAS4Q8IUM7 802 aa18.32■□□□□ 0.52
SSBP3-203ENST00000371319 ARMC5Q96C12 935 aa18.32■□□□□ 0.52
SSBP3-203ENST00000371319 SLC2A13Q96QE2 648 aa18.32■□□□□ 0.52
SSBP3-203ENST00000371319 TBCBQ99426 244 aa18.32■□□□□ 0.52
SSBP3-203ENST00000371319 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.32■□□□□ 0.52
SSBP3-203ENST00000371319 GPATCH2LQ9NWQ4 482 aa18.32■□□□□ 0.52
SSBP3-203ENST00000371319 CALCOCO1Q9P1Z2 691 aa18.32■□□□□ 0.52
SSBP3-203ENST00000371319 OAZ2O95190 189 aa18.31■□□□□ 0.52
SSBP3-203ENST00000371319 BDNFP23560 247 aa18.31■□□□□ 0.52
SSBP3-203ENST00000371319 HSPA9P38646 679 aaKnown RBP18.31■□□□□ 0.52
SSBP3-203ENST00000371319 ATXN1P54253 815 aaKnown RBP18.31■□□□□ 0.52
SSBP3-203ENST00000371319 CDH6P55285 790 aa18.31■□□□□ 0.52
SSBP3-203ENST00000371319 DPYSL3Q14195 570 aa18.31■□□□□ 0.52
SSBP3-203ENST00000371319 PPP1R7Q15435 360 aa18.31■□□□□ 0.52
SSBP3-203ENST00000371319 STRADAQ7RTN6 431 aa18.31■□□□□ 0.52
SSBP3-203ENST00000371319 BHLHA9Q7RTU4 235 aa18.31■□□□□ 0.52
SSBP3-203ENST00000371319 BNIPLQ7Z465 357 aa18.31■□□□□ 0.52
SSBP3-203ENST00000371319 FAM71BQ8TC56 605 aa18.31■□□□□ 0.52
SSBP3-203ENST00000371319 VWCEQ96DN2 955 aa18.31■□□□□ 0.52
SSBP3-203ENST00000371319 SNRNP25Q9BV90 132 aaKnown RBP18.31■□□□□ 0.52
SSBP3-203ENST00000371319 CNGB3Q9NQW8 809 aa18.31■□□□□ 0.52
SSBP3-203ENST00000371319 MARCH5Q9NX47 278 aa18.31■□□□□ 0.52
SSBP3-203ENST00000371319 HCSTQ9UBK5 93 aa18.31■□□□□ 0.52
SSBP3-203ENST00000371319 HOXA2O43364 376 aa18.3■□□□□ 0.52
SSBP3-203ENST00000371319 CST8O60676 142 aa18.3■□□□□ 0.52
SSBP3-203ENST00000371319 TADA2AO75478 443 aa18.3■□□□□ 0.52
SSBP3-203ENST00000371319 FYNP06241 537 aa18.3■□□□□ 0.52
SSBP3-203ENST00000371319 SLC11A1P49279 550 aa18.3■□□□□ 0.52
SSBP3-203ENST00000371319 YWHAZP63104 245 aaKnown RBP18.3■□□□□ 0.52
SSBP3-203ENST00000371319 MMRN1Q13201 1228 aa18.3■□□□□ 0.52
SSBP3-203ENST00000371319 MAPRE1Q15691 268 aaKnown RBP18.3■□□□□ 0.52
SSBP3-203ENST00000371319 CA9Q16790 459 aa18.3■□□□□ 0.52
SSBP3-203ENST00000371319 SLC25A52Q3SY17 297 aa18.3■□□□□ 0.52
SSBP3-203ENST00000371319 ZC3H12AQ5D1E8 599 aaKnown RBP18.3■□□□□ 0.52
SSBP3-203ENST00000371319 DEFB128Q7Z7B8 93 aa18.3■□□□□ 0.52
SSBP3-203ENST00000371319 RFX6Q8HWS3 928 aa18.3■□□□□ 0.52
SSBP3-203ENST00000371319 NT5C3BQ969T7 300 aa18.3■□□□□ 0.52
SSBP3-203ENST00000371319 FAM149B1Q96BN6 582 aa18.3■□□□□ 0.52
SSBP3-203ENST00000371319 HAUS1Q96CS2 278 aa18.3■□□□□ 0.52
SSBP3-203ENST00000371319 CCDC114Q96M63 670 aa18.3■□□□□ 0.52
SSBP3-203ENST00000371319 ZCWPW1Q9H0M4 648 aa18.3■□□□□ 0.52
SSBP3-203ENST00000371319 FEZ2Q9UHY8 353 aaPredicted RBP18.3■□□□□ 0.52
SSBP3-203ENST00000371319 DNPEPQ9ULA0 475 aa18.3■□□□□ 0.52
SSBP3-203ENST00000371319 DRG1Q9Y295 367 aaKnown RBP18.3■□□□□ 0.52
SSBP3-203ENST00000371319 ATP11BQ9Y2G3 1177 aa18.3■□□□□ 0.52
SSBP3-203ENST00000371319 TBKBP1A7MCY6 615 aa18.3■□□□□ 0.52
SSBP3-203ENST00000371319 H3BQF6 201 aa18.3■□□□□ 0.52
SSBP3-203ENST00000371319 SYN3O14994 580 aa18.3■□□□□ 0.52
SSBP3-203ENST00000371319 MDM4O15151 490 aa18.3■□□□□ 0.52
SSBP3-203ENST00000371319 TRAPPC3O43617 180 aa18.3■□□□□ 0.52
SSBP3-203ENST00000371319 HSPA8P11142 646 aaKnown RBP18.3■□□□□ 0.52
SSBP3-203ENST00000371319 NOS2P35228 1153 aa18.3■□□□□ 0.52
SSBP3-203ENST00000371319 SULT1E1P49888 294 aa18.3■□□□□ 0.52
SSBP3-203ENST00000371319 VCPP55072 806 aaKnown RBP18.3■□□□□ 0.52
SSBP3-203ENST00000371319 BCAR1P56945 870 aa18.3■□□□□ 0.52
SSBP3-203ENST00000371319 PDK2Q15119 407 aa18.3■□□□□ 0.52
SSBP3-203ENST00000371319 OASLQ15646 514 aaKnown RBP18.3■□□□□ 0.52
SSBP3-203ENST00000371319 SLC35B2Q8TB61 432 aa18.3■□□□□ 0.52
SSBP3-203ENST00000371319 NKD2Q969F2 451 aaPredicted RBP18.3■□□□□ 0.52
SSBP3-203ENST00000371319 NPY6RQ99463 290 aa18.3■□□□□ 0.52
SSBP3-203ENST00000371319 PCDH18Q9HCL0 1135 aa18.3■□□□□ 0.52
SSBP3-203ENST00000371319 DMAP1Q9NPF5 467 aaPredicted RBP18.3■□□□□ 0.52
SSBP3-203ENST00000371319 ADAM28Q9UKQ2 775 aa18.3■□□□□ 0.52
SSBP3-203ENST00000371319 CEP350Q5VT06 3117 aa18.29■□□□□ 0.52
SSBP3-203ENST00000371319 LTBP2Q14767 1821 aa18.29■□□□□ 0.52
SSBP3-203ENST00000371319 YJEFN3A6XGL0 299 aa18.29■□□□□ 0.52
SSBP3-203ENST00000371319 E7ENQ6 273 aa18.29■□□□□ 0.52
SSBP3-203ENST00000371319 GAS8O95995 478 aa18.29■□□□□ 0.52
SSBP3-203ENST00000371319 OR4Q2P0C623 313 aa18.29■□□□□ 0.52
SSBP3-203ENST00000371319 IL4RP24394 825 aa18.29■□□□□ 0.52
SSBP3-203ENST00000371319 IVDP26440 423 aa18.29■□□□□ 0.52
SSBP3-203ENST00000371319 GBP1P32455 592 aa18.29■□□□□ 0.52
SSBP3-203ENST00000371319 GJA8P48165 433 aa18.29■□□□□ 0.52
SSBP3-203ENST00000371319 DYNLT1P63172 113 aa18.29■□□□□ 0.52
SSBP3-203ENST00000371319 PITX1P78337 314 aaPredicted RBP18.29■□□□□ 0.52
SSBP3-203ENST00000371319 BYSLQ13895 437 aaKnown RBP18.29■□□□□ 0.52
SSBP3-203ENST00000371319 KRT81Q14533 505 aa18.29■□□□□ 0.52
SSBP3-203ENST00000371319 SYPL2Q5VXT5 272 aa18.29■□□□□ 0.52
SSBP3-203ENST00000371319 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.29■□□□□ 0.52
SSBP3-203ENST00000371319 VSIG1Q86XK7 387 aa18.29■□□□□ 0.52
SSBP3-203ENST00000371319 DNAJC5GQ8N7S2 189 aa18.29■□□□□ 0.52
SSBP3-203ENST00000371319 ART4Q93070 314 aa18.29■□□□□ 0.52
SSBP3-203ENST00000371319 TMEM175Q9BSA9 504 aa18.29■□□□□ 0.52
SSBP3-203ENST00000371319 COLEC11Q9BWP8 271 aa18.29■□□□□ 0.52
SSBP3-203ENST00000371319 CALN1Q9BXU9 219 aa18.29■□□□□ 0.52
SSBP3-203ENST00000371319 MRPL9Q9BYD2 267 aaKnown RBP18.29■□□□□ 0.52
SSBP3-203ENST00000371319 FRMD8P1Q9BZ68 369 aaPredicted RBP18.29■□□□□ 0.52
SSBP3-203ENST00000371319 ACBD3Q9H3P7 528 aa18.29■□□□□ 0.52
SSBP3-203ENST00000371319 POPDC2Q9HBU9 364 aa18.29■□□□□ 0.52
SSBP3-203ENST00000371319 COL4A6Q14031 1691 aa18.28■□□□□ 0.52
SSBP3-203ENST00000371319 AGPSO00116 658 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms