RNA–Protein interactions for RNA: ENST00000370828.3

GPC4-201, Transcript of glypican 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC4, Length 4,960 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4-201ENST00000370828 ARPINQ7Z6K5 226 aa13.11□□□□□ -0.31
GPC4-201ENST00000370828 NCAPG2Q86XI2 1143 aa13.11□□□□□ -0.31
GPC4-201ENST00000370828 IRF2BP1Q8IU81 584 aa13.11□□□□□ -0.31
GPC4-201ENST00000370828 ZBTB8BQ8NAP8 495 aaPredicted RBP13.11□□□□□ -0.31
GPC4-201ENST00000370828 ETNPPLQ8TBG4 499 aa13.11□□□□□ -0.31
GPC4-201ENST00000370828 FAM162AQ96A26 154 aa13.11□□□□□ -0.31
GPC4-201ENST00000370828 MATN2O00339 956 aa13.1□□□□□ -0.31
GPC4-201ENST00000370828 C2CD2LO14523 706 aa13.1□□□□□ -0.31
GPC4-201ENST00000370828 ADORA2BP29275 332 aa13.1□□□□□ -0.31
GPC4-201ENST00000370828 AVPR1AP37288 418 aa13.1□□□□□ -0.31
GPC4-201ENST00000370828 KCNK10P57789 538 aa13.1□□□□□ -0.31
GPC4-201ENST00000370828 PTK6Q13882 451 aa13.1□□□□□ -0.31
GPC4-201ENST00000370828 COG2Q14746 738 aa13.1□□□□□ -0.31
GPC4-201ENST00000370828 EFHC2Q5JST6 749 aa13.1□□□□□ -0.31
GPC4-201ENST00000370828 ZFP1Q6P2D0 407 aa13.1□□□□□ -0.31
GPC4-201ENST00000370828 ARMCX2Q7L311 632 aa13.1□□□□□ -0.31
GPC4-201ENST00000370828 ALYREFQ86V81 257 aaKnown RBP13.1□□□□□ -0.31
GPC4-201ENST00000370828 CBWD2Q8IUF1 395 aa13.1□□□□□ -0.31
GPC4-201ENST00000370828 BHLHE22Q8NFJ8 381 aaPredicted RBP13.1□□□□□ -0.31
GPC4-201ENST00000370828 SPOCK2Q92563 424 aa13.1□□□□□ -0.31
GPC4-201ENST00000370828 ELMO3Q96BJ8 720 aa13.1□□□□□ -0.31
GPC4-201ENST00000370828 WRNIP1Q96S55 665 aa13.1□□□□□ -0.31
GPC4-201ENST00000370828 CBWD1Q9BRT8 395 aa13.1□□□□□ -0.31
GPC4-201ENST00000370828 SLC5A4Q9NY91 659 aa13.1□□□□□ -0.31
GPC4-201ENST00000370828 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.1□□□□□ -0.31
GPC4-201ENST00000370828 DNPEPQ9ULA0 475 aa13.1□□□□□ -0.31
GPC4-201ENST00000370828 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.1□□□□□ -0.31
GPC4-201ENST00000370828 KBTBD13C9JR72 458 aa13.1□□□□□ -0.31
GPC4-201ENST00000370828 PARNO95453 639 aaKnown RBP13.1□□□□□ -0.31
GPC4-201ENST00000370828 GSNP06396 782 aa13.1□□□□□ -0.31
GPC4-201ENST00000370828 UQCRBP14927 111 aa13.1□□□□□ -0.31
GPC4-201ENST00000370828 PSMB9P28065 219 aa13.1□□□□□ -0.31
GPC4-201ENST00000370828 NAA20P61599 178 aa13.1□□□□□ -0.31
GPC4-201ENST00000370828 TAF5Q15542 800 aa13.1□□□□□ -0.31
GPC4-201ENST00000370828 TAGAPQ8N103 731 aa13.1□□□□□ -0.31
GPC4-201ENST00000370828 SCAIQ8N9R8 606 aa13.1□□□□□ -0.31
GPC4-201ENST00000370828 ZNF570Q96NI8 536 aa13.1□□□□□ -0.31
GPC4-201ENST00000370828 PNMA5Q96PV4 448 aa13.1□□□□□ -0.31
GPC4-201ENST00000370828 ARHGEF38Q9NXL2 777 aa13.1□□□□□ -0.31
GPC4-201ENST00000370828 WDR35Q9P2L0 1181 aa13.1□□□□□ -0.31
GPC4-201ENST00000370828 STK39Q9UEW8 545 aa13.1□□□□□ -0.31
GPC4-201ENST00000370828 HBS1LQ9Y450 684 aaKnown RBP13.1□□□□□ -0.31
GPC4-201ENST00000370828 HEATR9A2RTY3 570 aa13.1□□□□□ -0.31
GPC4-201ENST00000370828 TBX3O15119 743 aa13.1□□□□□ -0.31
GPC4-201ENST00000370828 LZTS3O60299 673 aaPredicted RBP13.1□□□□□ -0.31
GPC4-201ENST00000370828 HIRAP54198 1017 aaPredicted RBP13.1□□□□□ -0.31
GPC4-201ENST00000370828 TTC7BQ86TV6 843 aa13.1□□□□□ -0.31
GPC4-201ENST00000370828 FAM160B2Q86V87 743 aa13.1□□□□□ -0.31
GPC4-201ENST00000370828 C11orf74Q86VG3 221 aa13.1□□□□□ -0.31
GPC4-201ENST00000370828 ZNF677Q86XU0 584 aa13.1□□□□□ -0.31
GPC4-201ENST00000370828 KRT73Q86Y46 540 aa13.1□□□□□ -0.31
GPC4-201ENST00000370828 SLC35C1Q96A29 364 aa13.1□□□□□ -0.31
GPC4-201ENST00000370828 REXO4Q9GZR2 422 aaKnown RBP13.1□□□□□ -0.31
GPC4-201ENST00000370828 JMJD4Q9H9V9 463 aa13.1□□□□□ -0.31
GPC4-201ENST00000370828 SALL4Q9UJQ4 1053 aa13.1□□□□□ -0.31
GPC4-201ENST00000370828 AP4B1Q9Y6B7 739 aa13.1□□□□□ -0.31
GPC4-201ENST00000370828 KLRC4O43908 158 aa13.1□□□□□ -0.31
GPC4-201ENST00000370828 TPBGLP0DKB5 382 aa13.1□□□□□ -0.31
GPC4-201ENST00000370828 DRG2P55039 364 aaKnown RBP13.1□□□□□ -0.31
GPC4-201ENST00000370828 GTF2H3Q13889 308 aa13.1□□□□□ -0.31
GPC4-201ENST00000370828 CLPTM1LQ96KA5 538 aa13.1□□□□□ -0.31
GPC4-201ENST00000370828 DNAJC1Q96KC8 554 aaKnown RBP13.1□□□□□ -0.31
GPC4-201ENST00000370828 EPAS1Q99814 870 aa13.1□□□□□ -0.31
GPC4-201ENST00000370828 PLA2G12BQ9BX93 195 aa13.1□□□□□ -0.31
GPC4-201ENST00000370828 FRMD8Q9BZ67 464 aaPredicted RBP13.1□□□□□ -0.31
GPC4-201ENST00000370828 TRIM8Q9BZR9 551 aa13.1□□□□□ -0.31
GPC4-201ENST00000370828 PCDH9Q9HC56 1237 aa13.1□□□□□ -0.31
GPC4-201ENST00000370828 CPSF3Q9UKF6 684 aaKnown RBP13.1□□□□□ -0.31
GPC4-201ENST00000370828 ACTL7BQ9Y614 415 aa13.1□□□□□ -0.31
GPC4-201ENST00000370828 ABCA8O94911 1581 aa13.1□□□□□ -0.31
GPC4-201ENST00000370828 FKBP9O95302 570 aa13.09□□□□□ -0.31
GPC4-201ENST00000370828 LCP1P13796 627 aa13.09□□□□□ -0.31
GPC4-201ENST00000370828 ATN1P54259 1190 aaPredicted RBP13.09□□□□□ -0.31
GPC4-201ENST00000370828 UBAP2LQ14157 1087 aaKnown RBP13.09□□□□□ -0.31
GPC4-201ENST00000370828 LPIN1Q14693 890 aa13.09□□□□□ -0.31
GPC4-201ENST00000370828 DGKDQ16760 1214 aa13.09□□□□□ -0.31
GPC4-201ENST00000370828 UGP2Q16851 508 aa13.09□□□□□ -0.31
GPC4-201ENST00000370828 FKBP9P1Q75LS8 142 aa13.09□□□□□ -0.31
GPC4-201ENST00000370828 CLNKQ7Z7G1 428 aa13.09□□□□□ -0.31
GPC4-201ENST00000370828 ZCCHC9Q8N567 271 aaKnown RBP13.09□□□□□ -0.31
GPC4-201ENST00000370828 SAMD3Q8N6K7 520 aa13.09□□□□□ -0.31
GPC4-201ENST00000370828 SNX19Q92543 992 aa13.09□□□□□ -0.31
GPC4-201ENST00000370828 ART4Q93070 314 aa13.09□□□□□ -0.31
GPC4-201ENST00000370828 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.09□□□□□ -0.31
GPC4-201ENST00000370828 PIF1Q9H611 641 aa13.09□□□□□ -0.31
GPC4-201ENST00000370828 SLAIN2Q9P270 581 aa13.09□□□□□ -0.31
GPC4-201ENST00000370828 SRP68Q9UHB9 627 aaKnown RBP13.09□□□□□ -0.31
GPC4-201ENST00000370828 PCYOX1Q9UHG3 505 aa13.09□□□□□ -0.31
GPC4-201ENST00000370828 KLHL20Q9Y2M5 609 aa13.09□□□□□ -0.31
GPC4-201ENST00000370828 WBP11Q9Y2W2 641 aaKnown RBP13.09□□□□□ -0.31
GPC4-201ENST00000370828 FASP25445 335 aa13.09□□□□□ -0.31
GPC4-201ENST00000370828 CDK7P50613 346 aa13.09□□□□□ -0.31
GPC4-201ENST00000370828 RTP1P59025 263 aa13.09□□□□□ -0.31
GPC4-201ENST00000370828 SEPT1Q8WYJ6 367 aa13.09□□□□□ -0.31
GPC4-201ENST00000370828 IVNS1ABPQ9Y6Y0 642 aa13.09□□□□□ -0.31
GPC4-201ENST00000370828 SERPINE1P05121 402 aa13.09□□□□□ -0.31
GPC4-201ENST00000370828 C4BPBP20851 252 aa13.09□□□□□ -0.31
GPC4-201ENST00000370828 HNRNPH3P31942 346 aaKnown RBP13.09□□□□□ -0.31
GPC4-201ENST00000370828 PLA2G4FQ68DD2 849 aa13.09□□□□□ -0.31
GPC4-201ENST00000370828 FBXW8Q8N3Y1 598 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms