RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 ACADSBP45954 432 aa15.59■□□□□ 0.09
COL9A1-204ENST00000370496 ZXDAP98168 799 aa15.59■□□□□ 0.09
COL9A1-204ENST00000370496 ZNF268Q14587 947 aaPredicted RBP15.59■□□□□ 0.09
COL9A1-204ENST00000370496 SNX30Q5VWJ9 437 aa15.59■□□□□ 0.09
COL9A1-204ENST00000370496 RSRC2Q7L4I2 434 aaKnown RBP15.59■□□□□ 0.09
COL9A1-204ENST00000370496 TADA2BQ86TJ2 420 aa15.59■□□□□ 0.09
COL9A1-204ENST00000370496 NOP9Q86U38 636 aaKnown RBP15.59■□□□□ 0.09
COL9A1-204ENST00000370496 BPIFB1Q8TDL5 484 aa15.59■□□□□ 0.09
COL9A1-204ENST00000370496 IPO4Q8TEX9 1081 aaKnown RBP15.59■□□□□ 0.09
COL9A1-204ENST00000370496 GOLGA1Q92805 767 aa15.59■□□□□ 0.09
COL9A1-204ENST00000370496 RSPRY1Q96DX4 576 aa15.59■□□□□ 0.09
COL9A1-204ENST00000370496 CDK5RAP1Q96SZ6 601 aaKnown RBP15.59■□□□□ 0.09
COL9A1-204ENST00000370496 TRMT61BQ9BVS5 477 aaKnown RBP15.59■□□□□ 0.09
COL9A1-204ENST00000370496 PLA2G2FQ9BZM2 168 aa15.59■□□□□ 0.09
COL9A1-204ENST00000370496 SYNCQ9H7C4 482 aa15.59■□□□□ 0.09
COL9A1-204ENST00000370496 BRD9Q9H8M2 597 aa15.59■□□□□ 0.09
COL9A1-204ENST00000370496 SMPD4Q9NXE4 827 aa15.59■□□□□ 0.09
COL9A1-204ENST00000370496 FBXL21Q9UKT6 434 aa15.59■□□□□ 0.09
COL9A1-204ENST00000370496 ARHGAP26Q9UNA1 814 aa15.59■□□□□ 0.09
COL9A1-204ENST00000370496 FBXO21O94952 628 aa15.58■□□□□ 0.08
COL9A1-204ENST00000370496 OLFM2O95897 454 aa15.58■□□□□ 0.08
COL9A1-204ENST00000370496 CCDC172P0C7W6 258 aa15.58■□□□□ 0.08
COL9A1-204ENST00000370496 RARGP13631 454 aa15.58■□□□□ 0.08
COL9A1-204ENST00000370496 FERP16591 822 aa15.58■□□□□ 0.08
COL9A1-204ENST00000370496 GDI1P31150 447 aa15.58■□□□□ 0.08
COL9A1-204ENST00000370496 PGFP49763 221 aa15.58■□□□□ 0.08
COL9A1-204ENST00000370496 DAOAP59103 153 aa15.58■□□□□ 0.08
COL9A1-204ENST00000370496 YWHAGP61981 247 aaKnown RBP eCLIP15.58■□□□□ 0.08
COL9A1-204ENST00000370496 USP4Q13107 963 aa15.58■□□□□ 0.08
COL9A1-204ENST00000370496 C10orf120Q5SQS8 335 aa15.58■□□□□ 0.08
COL9A1-204ENST00000370496 CC2D1AQ6P1N0 951 aaPredicted RBP15.58■□□□□ 0.08
COL9A1-204ENST00000370496 ZNF677Q86XU0 584 aa15.58■□□□□ 0.08
COL9A1-204ENST00000370496 MFSD6LQ8IWD5 586 aa15.58■□□□□ 0.08
COL9A1-204ENST00000370496 STK32AQ8WU08 396 aa15.58■□□□□ 0.08
COL9A1-204ENST00000370496 SLC20A1Q8WUM9 679 aa15.58■□□□□ 0.08
COL9A1-204ENST00000370496 ANP32EQ9BTT0 268 aa15.58■□□□□ 0.08
COL9A1-204ENST00000370496 NUP58Q9BVL2 599 aa15.58■□□□□ 0.08
COL9A1-204ENST00000370496 MIS12Q9H081 205 aa15.58■□□□□ 0.08
COL9A1-204ENST00000370496 LHX5Q9H2C1 402 aa15.58■□□□□ 0.08
COL9A1-204ENST00000370496 NMUR1Q9HB89 426 aa15.58■□□□□ 0.08
COL9A1-204ENST00000370496 CYLDQ9NQC7 956 aa15.58■□□□□ 0.08
COL9A1-204ENST00000370496 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.58■□□□□ 0.08
COL9A1-204ENST00000370496 THG1LQ9NWX6 298 aaKnown RBP15.58■□□□□ 0.08
COL9A1-204ENST00000370496 CLIC5Q9NZA1 410 aa15.58■□□□□ 0.08
COL9A1-204ENST00000370496 NOCTQ9UK39 431 aaKnown RBP15.58■□□□□ 0.08
COL9A1-204ENST00000370496 MYO6Q9UM54 1294 aa15.58■□□□□ 0.08
COL9A1-204ENST00000370496 CPQQ9Y646 472 aa15.58■□□□□ 0.08
COL9A1-204ENST00000370496 COL4A2P08572 1712 aa15.57■□□□□ 0.08
COL9A1-204ENST00000370496 LRRC53A6NM62 1247 aa15.57■□□□□ 0.08
COL9A1-204ENST00000370496 E5RJQ4 531 aa15.57■□□□□ 0.08
COL9A1-204ENST00000370496 ZNF263O14978 683 aa15.57■□□□□ 0.08
COL9A1-204ENST00000370496 SART1O43290 800 aaKnown RBP15.57■□□□□ 0.08
COL9A1-204ENST00000370496 LSM8O95777 96 aaKnown RBP15.57■□□□□ 0.08
COL9A1-204ENST00000370496 MMEP08473 750 aa15.57■□□□□ 0.08
COL9A1-204ENST00000370496 PBX1P40424 430 aa15.57■□□□□ 0.08
COL9A1-204ENST00000370496 SNX16P57768 344 aa15.57■□□□□ 0.08
COL9A1-204ENST00000370496 SLC7A9P82251 487 aa15.57■□□□□ 0.08
COL9A1-204ENST00000370496 PFKPQ01813 784 aa15.57■□□□□ 0.08
COL9A1-204ENST00000370496 CDR2Q01850 454 aa15.57■□□□□ 0.08
COL9A1-204ENST00000370496 FCHO2Q0JRZ9 810 aa15.57■□□□□ 0.08
COL9A1-204ENST00000370496 MTF1Q14872 753 aa15.57■□□□□ 0.08
COL9A1-204ENST00000370496 ZNF77Q15935 545 aa15.57■□□□□ 0.08
COL9A1-204ENST00000370496 ASIC2Q16515 512 aa15.57■□□□□ 0.08
COL9A1-204ENST00000370496 FIGNQ5HY92 759 aa15.57■□□□□ 0.08
COL9A1-204ENST00000370496 BTBD8Q5XKL5 378 aa15.57■□□□□ 0.08
COL9A1-204ENST00000370496 PM20D1Q6GTS8 502 aa15.57■□□□□ 0.08
COL9A1-204ENST00000370496 SCD5Q86SK9 330 aa15.57■□□□□ 0.08
COL9A1-204ENST00000370496 DDX42Q86XP3 938 aaKnown RBP eCLIP15.57■□□□□ 0.08
COL9A1-204ENST00000370496 TMEM35BQ8NCS4 154 aa15.57■□□□□ 0.08
COL9A1-204ENST00000370496 MSANTD4Q8NCY6 345 aa15.57■□□□□ 0.08
COL9A1-204ENST00000370496 SH3RF2Q8TEC5 729 aa15.57■□□□□ 0.08
COL9A1-204ENST00000370496 CLEC4CQ8WTT0 213 aa15.57■□□□□ 0.08
COL9A1-204ENST00000370496 IRGQQ8WZA9 623 aa15.57■□□□□ 0.08
COL9A1-204ENST00000370496 BAP1Q92560 729 aa15.57■□□□□ 0.08
COL9A1-204ENST00000370496 NDRG1Q92597 394 aaKnown RBP15.57■□□□□ 0.08
COL9A1-204ENST00000370496 EDAQ92838 391 aa15.57■□□□□ 0.08
COL9A1-204ENST00000370496 IQCDQ96DY2 449 aa15.57■□□□□ 0.08
COL9A1-204ENST00000370496 PPP1R13BQ96KQ4 1090 aa15.57■□□□□ 0.08
COL9A1-204ENST00000370496 TTYH3Q9C0H2 523 aa15.57■□□□□ 0.08
COL9A1-204ENST00000370496 SLC2A4RGQ9NR83 387 aa15.57■□□□□ 0.08
COL9A1-204ENST00000370496 SEPT11Q9NVA2 429 aaKnown RBP15.57■□□□□ 0.08
COL9A1-204ENST00000370496 OSER1Q9NX31 292 aa15.57■□□□□ 0.08
COL9A1-204ENST00000370496 CYTH4Q9UIA0 394 aa15.57■□□□□ 0.08
COL9A1-204ENST00000370496 ITIH6Q6UXX5 1313 aa15.56■□□□□ 0.08
COL9A1-204ENST00000370496 YJEFN3A6XGL0 299 aa15.56■□□□□ 0.08
COL9A1-204ENST00000370496 E7ENQ6 273 aa15.56■□□□□ 0.08
COL9A1-204ENST00000370496 PI4K2BG5E9Z4 385 aa15.56■□□□□ 0.08
COL9A1-204ENST00000370496 IRF1P10914 325 aa15.56■□□□□ 0.08
COL9A1-204ENST00000370496 ATP5C1P36542 298 aaKnown RBP15.56■□□□□ 0.08
COL9A1-204ENST00000370496 GPC5P78333 572 aa15.56■□□□□ 0.08
COL9A1-204ENST00000370496 GOLGA8FQ08AF8 430 aa15.56■□□□□ 0.08
COL9A1-204ENST00000370496 SIGLEC14Q08ET2 396 aa15.56■□□□□ 0.08
COL9A1-204ENST00000370496 GOLGA8DPQ0D2H9 430 aa15.56■□□□□ 0.08
COL9A1-204ENST00000370496 ARHGAP29Q52LW3 1261 aa15.56■□□□□ 0.08
COL9A1-204ENST00000370496 SFMBT2Q5VUG0 894 aa15.56■□□□□ 0.08
COL9A1-204ENST00000370496 SCML4Q8N228 414 aa15.56■□□□□ 0.08
COL9A1-204ENST00000370496 RNF139Q8WU17 664 aa15.56■□□□□ 0.08
COL9A1-204ENST00000370496 DDX1Q92499 740 aaKnown RBP15.56■□□□□ 0.08
COL9A1-204ENST00000370496 IRF7Q92985 503 aa15.56■□□□□ 0.08
COL9A1-204ENST00000370496 FAM149B1Q96BN6 582 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms