RNA–Protein interactions for RNA: ENST00000369984.4

HCFC1-202, Transcript of host cell factor C1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HCFC1, Length 8,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-202ENST00000369984 UPP2O95045 317 aa12.84□□□□□ -0.35
HCFC1-202ENST00000369984 DDX39BQ13838 428 aaKnown RBP12.84□□□□□ -0.35
HCFC1-202ENST00000369984 NFYCQ13952 458 aa12.84□□□□□ -0.35
HCFC1-202ENST00000369984 RAET1EQ8TD07 263 aa12.84□□□□□ -0.35
HCFC1-202ENST00000369984 SYN2Q92777 582 aaPredicted RBP12.84□□□□□ -0.35
HCFC1-202ENST00000369984 PABPC3Q9H361 631 aaKnown RBP12.84□□□□□ -0.35
HCFC1-202ENST00000369984 RGS18Q9NS28 235 aa12.84□□□□□ -0.35
HCFC1-202ENST00000369984 DAPK2Q9UIK4 370 aa12.84□□□□□ -0.35
HCFC1-202ENST00000369984 NFICP08651 508 aa12.84□□□□□ -0.35
HCFC1-202ENST00000369984 RARBP10826 455 aa12.84□□□□□ -0.35
HCFC1-202ENST00000369984 KRT20P35900 424 aa12.84□□□□□ -0.35
HCFC1-202ENST00000369984 AMHR2Q16671 573 aa12.84□□□□□ -0.35
HCFC1-202ENST00000369984 EDRF1Q3B7T1 1238 aa12.84□□□□□ -0.35
HCFC1-202ENST00000369984 RSBN1Q5VWQ0 802 aaPredicted RBP12.84□□□□□ -0.35
HCFC1-202ENST00000369984 MTDHQ86UE4 582 aaKnown RBP12.84□□□□□ -0.35
HCFC1-202ENST00000369984 SYNE4Q8N205 404 aa12.84□□□□□ -0.35
HCFC1-202ENST00000369984 TINF2Q9BSI4 451 aa12.84□□□□□ -0.35
HCFC1-202ENST00000369984 ITGA4P13612 1032 aa12.84□□□□□ -0.35
HCFC1-202ENST00000369984 MRNIPQ6NTE8 343 aa12.84□□□□□ -0.35
HCFC1-202ENST00000369984 ATP6V1HQ9UI12 483 aa12.84□□□□□ -0.35
HCFC1-202ENST00000369984 PPP2R3BQ9Y5P8 575 aa12.84□□□□□ -0.35
HCFC1-202ENST00000369984 TIMM44O43615 452 aa12.84□□□□□ -0.35
HCFC1-202ENST00000369984 CTSHP09668 335 aa12.84□□□□□ -0.35
HCFC1-202ENST00000369984 ATP6AP1LQ52LC2 224 aa12.84□□□□□ -0.35
HCFC1-202ENST00000369984 CYP4Z2PQ8N1L4 340 aa12.84□□□□□ -0.35
HCFC1-202ENST00000369984 MMGT1Q8N4V1 131 aa12.84□□□□□ -0.35
HCFC1-202ENST00000369984 BHMTQ93088 406 aa12.84□□□□□ -0.35
HCFC1-202ENST00000369984 CAMKK2Q96RR4 588 aa12.84□□□□□ -0.35
HCFC1-202ENST00000369984 RXFP1Q9HBX9 757 aa12.84□□□□□ -0.35
HCFC1-202ENST00000369984 CYP4F12Q9HCS2 524 aa12.84□□□□□ -0.35
HCFC1-202ENST00000369984 KLHL3Q9UH77 587 aa12.84□□□□□ -0.35
HCFC1-202ENST00000369984 ZCCHC11Q5TAX3 1644 aaKnown RBP12.84□□□□□ -0.35
HCFC1-202ENST00000369984 CACNA1FO60840 1977 aa12.84□□□□□ -0.35
HCFC1-202ENST00000369984 C1orf232A0A0U1RR37 186 aa12.84□□□□□ -0.35
HCFC1-202ENST00000369984 SDR42E2A6NKP2 422 aa12.84□□□□□ -0.35
HCFC1-202ENST00000369984 SERPINH1P50454 418 aaKnown RBP12.84□□□□□ -0.35
HCFC1-202ENST00000369984 TSNQ15631 228 aaKnown RBP12.84□□□□□ -0.35
HCFC1-202ENST00000369984 MAPK11Q15759 364 aa12.84□□□□□ -0.35
HCFC1-202ENST00000369984 CYP39A1Q9NYL5 469 aa12.84□□□□□ -0.35
HCFC1-202ENST00000369984 POLG2Q9UHN1 485 aa12.84□□□□□ -0.35
HCFC1-202ENST00000369984 MCM8Q9UJA3 840 aa12.84□□□□□ -0.35
HCFC1-202ENST00000369984 ZNF521Q96K83 1311 aa12.84□□□□□ -0.35
HCFC1-202ENST00000369984 KDM6AO15550 1401 aaPredicted RBP12.84□□□□□ -0.35
HCFC1-202ENST00000369984 TMEM253P0C7T8 217 aa12.84□□□□□ -0.35
HCFC1-202ENST00000369984 BCAP31P51572 246 aa12.84□□□□□ -0.35
HCFC1-202ENST00000369984 PDPK2PQ6A1A2 396 aa12.84□□□□□ -0.35
HCFC1-202ENST00000369984 EFCAB12Q6NXP0 572 aa12.84□□□□□ -0.35
HCFC1-202ENST00000369984 PNKPQ96T60 521 aa12.84□□□□□ -0.35
HCFC1-202ENST00000369984 CHD1O14646 1710 aa12.84□□□□□ -0.35
HCFC1-202ENST00000369984 RGS20O76081 388 aa12.84□□□□□ -0.35
HCFC1-202ENST00000369984 ARF4P18085 180 aaPredicted RBP12.84□□□□□ -0.35
HCFC1-202ENST00000369984 OR1G1P47890 313 aa12.84□□□□□ -0.35
HCFC1-202ENST00000369984 PRKCEQ02156 737 aa12.84□□□□□ -0.35
HCFC1-202ENST00000369984 ZNF438Q7Z4V0 828 aa12.84□□□□□ -0.35
HCFC1-202ENST00000369984 TRPC4APQ8TEL6 797 aa12.84□□□□□ -0.35
HCFC1-202ENST00000369984 SLITRK1Q96PX8 696 aa12.84□□□□□ -0.35
HCFC1-202ENST00000369984 COPS7BQ9H9Q2 264 aaPredicted RBP12.84□□□□□ -0.35
HCFC1-202ENST00000369984 ZDHHC9Q9Y397 364 aa12.84□□□□□ -0.35
HCFC1-202ENST00000369984 GMEB1Q9Y692 573 aa12.84□□□□□ -0.35
HCFC1-202ENST00000369984 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.84□□□□□ -0.356e-7■■■□□ 14.8
HCFC1-202ENST00000369984 ADGRL3Q9HAR2 1447 aa12.83□□□□□ -0.35
HCFC1-202ENST00000369984 TM9SF1O15321 606 aa12.83□□□□□ -0.35
HCFC1-202ENST00000369984 PIK3R1P27986 724 aa12.83□□□□□ -0.35
HCFC1-202ENST00000369984 HMGCS2P54868 508 aa12.83□□□□□ -0.35
HCFC1-202ENST00000369984 AQP5P55064 265 aa12.83□□□□□ -0.35
HCFC1-202ENST00000369984 IL5RAQ01344 420 aa12.83□□□□□ -0.35
HCFC1-202ENST00000369984 STX4Q12846 297 aa12.83□□□□□ -0.35
HCFC1-202ENST00000369984 TDRD10Q5VZ19 366 aaKnown RBP12.83□□□□□ -0.35
HCFC1-202ENST00000369984 NOTUMQ6P988 496 aa12.83□□□□□ -0.35
HCFC1-202ENST00000369984 IZUMO2Q6UXV1 221 aa12.83□□□□□ -0.35
HCFC1-202ENST00000369984 STRA8Q7Z7C7 330 aa12.83□□□□□ -0.35
HCFC1-202ENST00000369984 MYCBPAPQ8TBZ2 947 aa12.83□□□□□ -0.35
HCFC1-202ENST00000369984 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.83□□□□□ -0.353e-9■■□□□ 13.6
HCFC1-202ENST00000369984 PRR23AA6NEV1 266 aa12.83□□□□□ -0.36
HCFC1-202ENST00000369984 STX7O15400 261 aaKnown RBP12.83□□□□□ -0.36
HCFC1-202ENST00000369984 NOS3P29474 1203 aa12.83□□□□□ -0.36
HCFC1-202ENST00000369984 IKBIPQ70UQ0 350 aa12.83□□□□□ -0.36
HCFC1-202ENST00000369984 EPHX4Q8IUS5 362 aa12.83□□□□□ -0.36
HCFC1-202ENST00000369984 B3GALNT2Q8NCR0 500 aa12.83□□□□□ -0.36
HCFC1-202ENST00000369984 TMEM120AQ9BXJ8 343 aa12.83□□□□□ -0.36
HCFC1-202ENST00000369984 TAGLN3Q9UI15 199 aa12.83□□□□□ -0.36
HCFC1-202ENST00000369984 LRRC7Q96NW7 1537 aa12.83□□□□□ -0.36
HCFC1-202ENST00000369984 YWHAZP63104 245 aaKnown RBP12.83□□□□□ -0.36
HCFC1-202ENST00000369984 RAD9BQ6WBX8 426 aa12.83□□□□□ -0.36
HCFC1-202ENST00000369984 CLEC17AQ6ZS10 378 aa12.83□□□□□ -0.36
HCFC1-202ENST00000369984 EID3Q8N140 333 aa12.83□□□□□ -0.36
HCFC1-202ENST00000369984 FAM136AQ96C01 138 aa12.83□□□□□ -0.36
HCFC1-202ENST00000369984 PPP1R14BQ96C90 147 aa12.83□□□□□ -0.36
HCFC1-202ENST00000369984 PPP1R10Q96QC0 940 aaKnown RBP12.83□□□□□ -0.36
HCFC1-202ENST00000369984 OSBPL6Q9BZF3 934 aa12.83□□□□□ -0.36
HCFC1-202ENST00000369984 ROGDIQ9GZN7 287 aa12.83□□□□□ -0.36
HCFC1-202ENST00000369984 NOL6Q9H6R4 1146 aaKnown RBP12.83□□□□□ -0.36
HCFC1-202ENST00000369984 BTN3A3O00478 584 aa12.83□□□□□ -0.36
HCFC1-202ENST00000369984 DYRK3O43781 588 aa12.83□□□□□ -0.36
HCFC1-202ENST00000369984 KLHL41O60662 606 aa12.83□□□□□ -0.36
HCFC1-202ENST00000369984 SEMA3DO95025 777 aa12.83□□□□□ -0.36
HCFC1-202ENST00000369984 ZNF618Q5T7W0 954 aa12.83□□□□□ -0.36
HCFC1-202ENST00000369984 ZBTB49Q6ZSB9 765 aa12.83□□□□□ -0.36
HCFC1-202ENST00000369984 FRMD8P1Q9BZ68 369 aaPredicted RBP12.83□□□□□ -0.36
HCFC1-202ENST00000369984 THAP2Q9H0W7 228 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms