RNA–Protein interactions for RNA: ENST00000369763.4

LRIF1-201, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene LRIF1, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-201ENST00000369763 ELOVL4Q9GZR5 314 aa11.34□□□□□ -0.59
LRIF1-201ENST00000369763 XYLT2Q9H1B5 865 aa11.34□□□□□ -0.59
LRIF1-201ENST00000369763 DCLRE1BQ9H816 532 aa11.34□□□□□ -0.59
LRIF1-201ENST00000369763 NRBP2Q9NSY0 501 aa11.34□□□□□ -0.59
LRIF1-201ENST00000369763 MAFBQ9Y5Q3 323 aaPredicted RBP11.34□□□□□ -0.59
LRIF1-201ENST00000369763 STYXL1Q9Y6J8 313 aa11.34□□□□□ -0.59
LRIF1-201ENST00000369763 MYO18AQ92614 2054 aaKnown RBP11.34□□□□□ -0.59
LRIF1-201ENST00000369763 ARHGAP42A6NI28 874 aa11.34□□□□□ -0.59
LRIF1-201ENST00000369763 I3L4J1 428 aa11.34□□□□□ -0.59
LRIF1-201ENST00000369763 OGTO15294 1046 aa11.34□□□□□ -0.59
LRIF1-201ENST00000369763 MAFGO15525 162 aa11.34□□□□□ -0.59
LRIF1-201ENST00000369763 ZBED1O96006 694 aa11.34□□□□□ -0.59
LRIF1-201ENST00000369763 HOXC6P09630 235 aa11.34□□□□□ -0.59
LRIF1-201ENST00000369763 TFE3P19532 575 aaPredicted RBP11.34□□□□□ -0.59
LRIF1-201ENST00000369763 EIF4BP23588 611 aaKnown RBP11.34□□□□□ -0.59
LRIF1-201ENST00000369763 ABCG1P45844 678 aa11.34□□□□□ -0.59
LRIF1-201ENST00000369763 NEK3P51956 506 aa11.34□□□□□ -0.59
LRIF1-201ENST00000369763 EPHB1P54762 984 aa11.34□□□□□ -0.59
LRIF1-201ENST00000369763 CDK16Q00536 496 aa11.34□□□□□ -0.59
LRIF1-201ENST00000369763 ANGEL2Q5VTE6 544 aaKnown RBP11.34□□□□□ -0.59
LRIF1-201ENST00000369763 TEX9Q8N6V9 391 aa11.34□□□□□ -0.59
LRIF1-201ENST00000369763 ACO2Q99798 780 aaKnown RBP11.34□□□□□ -0.59
LRIF1-201ENST00000369763 SMYD2Q9NRG4 433 aa11.34□□□□□ -0.59
LRIF1-201ENST00000369763 LAMA3Q16787 3333 aa11.34□□□□□ -0.59
LRIF1-201ENST00000369763 LOC100653049A0A140TA62 436 aa11.33□□□□□ -0.6
LRIF1-201ENST00000369763 HCRTO43612 131 aa11.33□□□□□ -0.6
LRIF1-201ENST00000369763 KRT34O76011 436 aa11.33□□□□□ -0.6
LRIF1-201ENST00000369763 LUC7L3O95232 432 aaKnown RBP11.33□□□□□ -0.6
LRIF1-201ENST00000369763 KCNA4P22459 653 aa11.33□□□□□ -0.6
LRIF1-201ENST00000369763 POLE2P56282 527 aa11.33□□□□□ -0.6
LRIF1-201ENST00000369763 RTP1P59025 263 aa11.33□□□□□ -0.6
LRIF1-201ENST00000369763 KLC1Q07866 573 aa11.33□□□□□ -0.6
LRIF1-201ENST00000369763 TNFAIP1Q13829 316 aa11.33□□□□□ -0.6
LRIF1-201ENST00000369763 EML3Q32P44 896 aa11.33□□□□□ -0.6
LRIF1-201ENST00000369763 LRRC38Q5VT99 294 aa11.33□□□□□ -0.6
LRIF1-201ENST00000369763 TRNP1Q6NT89 227 aa11.33□□□□□ -0.6
LRIF1-201ENST00000369763 NUDCD3Q8IVD9 361 aa11.33□□□□□ -0.6
LRIF1-201ENST00000369763 RBM15BQ8NDT2 890 aaKnown RBP11.33□□□□□ -0.6
LRIF1-201ENST00000369763 AGBL3Q8NEM8 1001 aa11.33□□□□□ -0.6
LRIF1-201ENST00000369763 G3BP2Q9UN86 482 aaKnown RBP11.33□□□□□ -0.6
LRIF1-201ENST00000369763 DCAF8L1A6NGE4 600 aa11.33□□□□□ -0.6
LRIF1-201ENST00000369763 APOC4-APOC2K7ER74 178 aa11.33□□□□□ -0.6
LRIF1-201ENST00000369763 ZMPSTE24O75844 475 aa11.33□□□□□ -0.6
LRIF1-201ENST00000369763 LSM8O95777 96 aaKnown RBP11.33□□□□□ -0.6
LRIF1-201ENST00000369763 APOC2P02655 101 aa11.33□□□□□ -0.6
LRIF1-201ENST00000369763 IQCF3P0C7M6 154 aa11.33□□□□□ -0.6
LRIF1-201ENST00000369763 CSH1P0DML2 217 aa11.33□□□□□ -0.6
LRIF1-201ENST00000369763 CSH2P0DML3 217 aa11.33□□□□□ -0.6
LRIF1-201ENST00000369763 ATP6V1C1P21283 382 aa11.33□□□□□ -0.6
LRIF1-201ENST00000369763 GTF2A2P52657 109 aa11.33□□□□□ -0.6
LRIF1-201ENST00000369763 BCAR1P56945 870 aa11.33□□□□□ -0.6
LRIF1-201ENST00000369763 ATF7IP2Q5U623 682 aa11.33□□□□□ -0.6
LRIF1-201ENST00000369763 ZBTB8OSQ8IWT0 167 aa11.33□□□□□ -0.6
LRIF1-201ENST00000369763 C1orf127Q8N9H9 656 aa11.33□□□□□ -0.6
LRIF1-201ENST00000369763 PHC3Q8NDX5 983 aa11.33□□□□□ -0.6
LRIF1-201ENST00000369763 MOCOSQ96EN8 888 aa11.33□□□□□ -0.6
LRIF1-201ENST00000369763 APOPT1Q96IL0 206 aa11.33□□□□□ -0.6
LRIF1-201ENST00000369763 VPS11Q9H270 941 aa11.33□□□□□ -0.6
LRIF1-201ENST00000369763 STOML1Q9UBI4 398 aa11.33□□□□□ -0.6
LRIF1-201ENST00000369763 MFHAS1Q9Y4C4 1052 aa11.33□□□□□ -0.6
LRIF1-201ENST00000369763 CCDC78A2IDD5 438 aa11.33□□□□□ -0.6
LRIF1-201ENST00000369763 SPDYE16A6NNV3 312 aaPredicted RBP11.33□□□□□ -0.6
LRIF1-201ENST00000369763 PLSCR1O15162 318 aa11.33□□□□□ -0.6
LRIF1-201ENST00000369763 FARP2O94887 1054 aaPredicted RBP11.33□□□□□ -0.6
LRIF1-201ENST00000369763 ARIH2O95376 493 aa11.33□□□□□ -0.6
LRIF1-201ENST00000369763 TRUB2O95900 331 aaKnown RBP11.33□□□□□ -0.6
LRIF1-201ENST00000369763 PTPN11Q06124 597 aaPredicted RBP11.33□□□□□ -0.6
LRIF1-201ENST00000369763 TREML2Q5T2D2 321 aa11.33□□□□□ -0.6
LRIF1-201ENST00000369763 MAP1SQ66K74 1059 aaPredicted RBP11.33□□□□□ -0.6
LRIF1-201ENST00000369763 JADE1Q6IE81 842 aa11.33□□□□□ -0.6
LRIF1-201ENST00000369763 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.33□□□□□ -0.65e-6■■■■■ 81.8
LRIF1-201ENST00000369763 RPF1Q9H9Y2 349 aaKnown RBP11.33□□□□□ -0.6
LRIF1-201ENST00000369763 SEPT10Q9P0V9 454 aa11.33□□□□□ -0.6
LRIF1-201ENST00000369763 LRRC42Q9Y546 428 aa11.33□□□□□ -0.6
LRIF1-201ENST00000369763 PRR5-ARHGAP8B1AHC4 643 aa11.32□□□□□ -0.6
LRIF1-201ENST00000369763 TM9SF1O15321 606 aa11.32□□□□□ -0.6
LRIF1-201ENST00000369763 PSMG1O95456 288 aa11.32□□□□□ -0.6
LRIF1-201ENST00000369763 SESN2P58004 480 aaPredicted RBP11.32□□□□□ -0.6
LRIF1-201ENST00000369763 RPL10AP62906 217 aaKnown RBP11.32□□□□□ -0.6
LRIF1-201ENST00000369763 YWHAZP63104 245 aaKnown RBP11.32□□□□□ -0.6
LRIF1-201ENST00000369763 ARHGAP8P85298 464 aa11.32□□□□□ -0.6
LRIF1-201ENST00000369763 SLC25A3Q00325 362 aa11.32□□□□□ -0.6
LRIF1-201ENST00000369763 OLIG2Q13516 323 aa11.32□□□□□ -0.6
LRIF1-201ENST00000369763 PPP2R5DQ14738 602 aa11.32□□□□□ -0.6
LRIF1-201ENST00000369763 PRKD1Q15139 912 aaPredicted RBP11.32□□□□□ -0.6
LRIF1-201ENST00000369763 FKBP1CQ5VVH2 108 aa11.32□□□□□ -0.6
LRIF1-201ENST00000369763 LRRC74BQ6ZQY2 392 aa11.32□□□□□ -0.6
LRIF1-201ENST00000369763 RGS9BPQ6ZS82 235 aa11.32□□□□□ -0.6
LRIF1-201ENST00000369763 CCNJLQ8IV13 435 aa11.32□□□□□ -0.6
LRIF1-201ENST00000369763 KBTBD2Q8IY47 623 aa11.32□□□□□ -0.6
LRIF1-201ENST00000369763 TTC13Q8NBP0 860 aa11.32□□□□□ -0.6
LRIF1-201ENST00000369763 SLC4A11Q8NBS3 891 aa11.32□□□□□ -0.6
LRIF1-201ENST00000369763 REPS2Q8NFH8 660 aa11.32□□□□□ -0.6
LRIF1-201ENST00000369763 SLC44A1Q8WWI5 657 aa11.32□□□□□ -0.6
LRIF1-201ENST00000369763 PTCD3Q96EY7 689 aaKnown RBP11.32□□□□□ -0.6
LRIF1-201ENST00000369763 SIX4Q9UIU6 781 aa11.32□□□□□ -0.6
LRIF1-201ENST00000369763 STRIP2Q9ULQ0 834 aa11.32□□□□□ -0.6
LRIF1-201ENST00000369763 CNTN6Q9UQ52 1028 aa11.32□□□□□ -0.6
LRIF1-201ENST00000369763 MRPL42Q9Y6G3 142 aaKnown RBP11.32□□□□□ -0.6
LRIF1-201ENST00000369763 LACTBL1A8MY62 500 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms