RNA–Protein interactions for RNA: ENST00000369406.7

HMGCS2-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS2, Length 2,428 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-201ENST00000369406 RCOR2Q8IZ40 523 aa14.75□□□□□ -0.05
HMGCS2-201ENST00000369406 CCDC185Q8N715 623 aa14.75□□□□□ -0.05
HMGCS2-201ENST00000369406 AENQ8WTP8 325 aaKnown RBP14.75□□□□□ -0.05
HMGCS2-201ENST00000369406 FAM149B1Q96BN6 582 aa14.75□□□□□ -0.05
HMGCS2-201ENST00000369406 HAUS1Q96CS2 278 aa14.75□□□□□ -0.05
HMGCS2-201ENST00000369406 DDX23Q9BUQ8 820 aaKnown RBP14.75□□□□□ -0.05
HMGCS2-201ENST00000369406 DCLK3Q9C098 648 aa14.75□□□□□ -0.05
HMGCS2-201ENST00000369406 CRISPLD1Q9H336 500 aa14.75□□□□□ -0.05
HMGCS2-201ENST00000369406 LRRC4Q9HBW1 653 aa14.75□□□□□ -0.05
HMGCS2-201ENST00000369406 ADAM12O43184 909 aa14.75□□□□□ -0.05
HMGCS2-201ENST00000369406 SOAT2O75908 522 aa14.75□□□□□ -0.05
HMGCS2-201ENST00000369406 DR1Q01658 176 aa14.75□□□□□ -0.05
HMGCS2-201ENST00000369406 CCDC137Q6PK04 289 aaKnown RBP14.75□□□□□ -0.05
HMGCS2-201ENST00000369406 PRSS55Q6UWB4 352 aaPredicted RBP14.75□□□□□ -0.05
HMGCS2-201ENST00000369406 JAMLQ86YT9 394 aa14.75□□□□□ -0.05
HMGCS2-201ENST00000369406 SIX6OS1Q8N1H7 587 aa14.75□□□□□ -0.05
HMGCS2-201ENST00000369406 THEM5Q8N1Q8 247 aa14.75□□□□□ -0.05
HMGCS2-201ENST00000369406 LRRC43Q8N309 656 aa14.75□□□□□ -0.05
HMGCS2-201ENST00000369406 CMASQ8NFW8 434 aaPredicted RBP14.75□□□□□ -0.05
HMGCS2-201ENST00000369406 ADAM32Q8TC27 787 aa14.75□□□□□ -0.05
HMGCS2-201ENST00000369406 TRIM31Q9BZY9 425 aa14.75□□□□□ -0.05
HMGCS2-201ENST00000369406 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.75□□□□□ -0.05
HMGCS2-201ENST00000369406 LCMT1Q9UIC8 334 aa14.75□□□□□ -0.05
HMGCS2-201ENST00000369406 NFU1Q9UMS0 254 aa14.75□□□□□ -0.05
HMGCS2-201ENST00000369406 I6L893 689 aaPredicted RBP14.74□□□□□ -0.05
HMGCS2-201ENST00000369406 DAB1O75553 588 aa14.74□□□□□ -0.05
HMGCS2-201ENST00000369406 RNF8O76064 485 aa14.74□□□□□ -0.05
HMGCS2-201ENST00000369406 PARNO95453 639 aaKnown RBP14.74□□□□□ -0.05
HMGCS2-201ENST00000369406 ALDH2P05091 517 aa14.74□□□□□ -0.05
HMGCS2-201ENST00000369406 SCNN1AP37088 669 aa14.74□□□□□ -0.05
HMGCS2-201ENST00000369406 PTPN9P43378 593 aa14.74□□□□□ -0.05
HMGCS2-201ENST00000369406 TSPY1Q01534 308 aa14.74□□□□□ -0.05
HMGCS2-201ENST00000369406 SCYL2Q6P3W7 929 aa14.74□□□□□ -0.05
HMGCS2-201ENST00000369406 BNIPLQ7Z465 357 aa14.74□□□□□ -0.05
HMGCS2-201ENST00000369406 HNRNPLLQ8WVV9 542 aaKnown RBP14.74□□□□□ -0.05
HMGCS2-201ENST00000369406 IFT81Q8WYA0 676 aa14.74□□□□□ -0.05
HMGCS2-201ENST00000369406 SLC2A13Q96QE2 648 aa14.74□□□□□ -0.05
HMGCS2-201ENST00000369406 SNRNP25Q9BV90 132 aaKnown RBP14.74□□□□□ -0.05
HMGCS2-201ENST00000369406 FUT8Q9BYC5 575 aa14.74□□□□□ -0.05
HMGCS2-201ENST00000369406 DPH5Q9H2P9 285 aa14.74□□□□□ -0.05
HMGCS2-201ENST00000369406 LRRC19Q9H756 370 aa14.74□□□□□ -0.05
HMGCS2-201ENST00000369406 ANLNQ9NQW6 1124 aa14.74□□□□□ -0.05
HMGCS2-201ENST00000369406 ABI2Q9NYB9 513 aaPredicted RBP14.74□□□□□ -0.05
HMGCS2-201ENST00000369406 GOLGA6L10A0A0M3HER8 536 aa14.74□□□□□ -0.05
HMGCS2-201ENST00000369406 TNFRSF10BO14763 440 aa14.74□□□□□ -0.05
HMGCS2-201ENST00000369406 DAPK3O43293 454 aa14.74□□□□□ -0.05
HMGCS2-201ENST00000369406 IL4RP24394 825 aa14.74□□□□□ -0.05
HMGCS2-201ENST00000369406 WDR5P61964 334 aaKnown RBP14.74□□□□□ -0.05
HMGCS2-201ENST00000369406 DYNLT1P63172 113 aa14.74□□□□□ -0.05
HMGCS2-201ENST00000369406 DCAF6Q58WW2 860 aa14.74□□□□□ -0.05
HMGCS2-201ENST00000369406 TMCO3Q6UWJ1 677 aa14.74□□□□□ -0.05
HMGCS2-201ENST00000369406 ATAD1Q8NBU5 361 aa14.74□□□□□ -0.05
HMGCS2-201ENST00000369406 TOP1MTQ969P6 601 aa14.74□□□□□ -0.05
HMGCS2-201ENST00000369406 RBM41Q96IZ5 413 aaKnown RBP14.74□□□□□ -0.05
HMGCS2-201ENST00000369406 DNAI2Q9GZS0 605 aa14.74□□□□□ -0.05
HMGCS2-201ENST00000369406 C10orf88Q9H8K7 445 aa14.74□□□□□ -0.05
HMGCS2-201ENST00000369406 ARGLU1Q9NWB6 273 aaPredicted RBP14.74□□□□□ -0.05
HMGCS2-201ENST00000369406 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.74□□□□□ -0.05
HMGCS2-201ENST00000369406 PCYOX1Q9UHG3 505 aa14.74□□□□□ -0.05
HMGCS2-201ENST00000369406 SYN3O14994 580 aa14.73□□□□□ -0.05
HMGCS2-201ENST00000369406 HOXA2O43364 376 aa14.73□□□□□ -0.05
HMGCS2-201ENST00000369406 TBC1D4O60343 1298 aa14.73□□□□□ -0.05
HMGCS2-201ENST00000369406 HSF2BPO75031 334 aa14.73□□□□□ -0.05
HMGCS2-201ENST00000369406 ENDOD1O94919 500 aa14.73□□□□□ -0.05
HMGCS2-201ENST00000369406 PAX3P23760 479 aa14.73□□□□□ -0.05
HMGCS2-201ENST00000369406 TNFRSF8P28908 595 aa14.73□□□□□ -0.05
HMGCS2-201ENST00000369406 CHRNA3P32297 505 aa14.73□□□□□ -0.05
HMGCS2-201ENST00000369406 MATKP42679 507 aa14.73□□□□□ -0.05
HMGCS2-201ENST00000369406 SLC8A3P57103 927 aa14.73□□□□□ -0.05
HMGCS2-201ENST00000369406 YWHAZP63104 245 aaKnown RBP14.73□□□□□ -0.05
HMGCS2-201ENST00000369406 DPYSL3Q14195 570 aa14.73□□□□□ -0.05
HMGCS2-201ENST00000369406 ACAP1Q15027 740 aa14.73□□□□□ -0.05
HMGCS2-201ENST00000369406 CTXN3Q4LDR2 81 aa14.73□□□□□ -0.05
HMGCS2-201ENST00000369406 ARCQ7LC44 396 aa14.73□□□□□ -0.05
HMGCS2-201ENST00000369406 GPR152Q8TDT2 470 aa14.73□□□□□ -0.05
HMGCS2-201ENST00000369406 SEC14L1Q92503 715 aa14.73□□□□□ -0.05
HMGCS2-201ENST00000369406 EDEM1Q92611 657 aa14.73□□□□□ -0.05
HMGCS2-201ENST00000369406 NT5C3BQ969T7 300 aa14.73□□□□□ -0.05
HMGCS2-201ENST00000369406 ZNF689Q96CS4 500 aaPredicted RBP14.73□□□□□ -0.05
HMGCS2-201ENST00000369406 TMEM175Q9BSA9 504 aa14.73□□□□□ -0.05
HMGCS2-201ENST00000369406 COLEC11Q9BWP8 271 aa14.73□□□□□ -0.05
HMGCS2-201ENST00000369406 MRPL9Q9BYD2 267 aaKnown RBP14.73□□□□□ -0.05
HMGCS2-201ENST00000369406 MCOLN1Q9GZU1 580 aa14.73□□□□□ -0.05
HMGCS2-201ENST00000369406 DMAP1Q9NPF5 467 aaPredicted RBP14.73□□□□□ -0.05
HMGCS2-201ENST00000369406 DDX56Q9NY93 547 aaKnown RBP14.73□□□□□ -0.05
HMGCS2-201ENST00000369406 PLXNA4Q9HCM2 1894 aa14.73□□□□□ -0.05
HMGCS2-201ENST00000369406 SYNJ2BP-COX16A0A087WUM0 186 aa14.73□□□□□ -0.05
HMGCS2-201ENST00000369406 KRT7P08729 469 aa14.73□□□□□ -0.05
HMGCS2-201ENST00000369406 RPL17P18621 184 aaKnown RBP14.73□□□□□ -0.05
HMGCS2-201ENST00000369406 PTPN7P35236 360 aa14.73□□□□□ -0.05
HMGCS2-201ENST00000369406 SULT1E1P49888 294 aa14.73□□□□□ -0.05
HMGCS2-201ENST00000369406 EPHB4P54760 987 aa14.73□□□□□ -0.05
HMGCS2-201ENST00000369406 ARPP19P56211 112 aa14.73□□□□□ -0.05
HMGCS2-201ENST00000369406 IFRD2Q12894 506 aaPredicted RBP14.73□□□□□ -0.05
HMGCS2-201ENST00000369406 HADHQ16836 314 aaKnown RBP14.73□□□□□ -0.05
HMGCS2-201ENST00000369406 TFDP3Q5H9I0 405 aa14.73□□□□□ -0.05
HMGCS2-201ENST00000369406 EFHC1Q5JVL4 640 aa14.73□□□□□ -0.05
HMGCS2-201ENST00000369406 SPATA2LQ8IUW3 424 aaPredicted RBP14.73□□□□□ -0.05
HMGCS2-201ENST00000369406 PYROXD2Q8N2H3 581 aa14.73□□□□□ -0.05
HMGCS2-201ENST00000369406 GLIS1Q8NBF1 620 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms