RNA–Protein interactions for RNA: ENST00000368979.6

SNX3-203, Transcript of sorting nexin 3, humanhuman

TSL 2

Gene SNX3, Length 1,537 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-203ENST00000368979 USP18Q9UMW8 372 aa24.99■■□□□ 1.59
SNX3-203ENST00000368979 PCDHB12Q9Y5F1 795 aa24.99■■□□□ 1.59
SNX3-203ENST00000368979 WDR27A2RRH5 827 aa24.98■■□□□ 1.59
SNX3-203ENST00000368979 ZRANB2O95218 330 aaKnown RBP eCLIP24.98■■□□□ 1.59
SNX3-203ENST00000368979 TRUB2O95900 331 aaKnown RBP24.98■■□□□ 1.59
SNX3-203ENST00000368979 FYNP06241 537 aa24.98■■□□□ 1.59
SNX3-203ENST00000368979 TFE3P19532 575 aaPredicted RBP24.98■■□□□ 1.59
SNX3-203ENST00000368979 NOS2P35228 1153 aa24.98■■□□□ 1.59
SNX3-203ENST00000368979 ROR1Q01973 937 aa24.98■■□□□ 1.59
SNX3-203ENST00000368979 RASIP1Q5U651 963 aa24.98■■□□□ 1.59
SNX3-203ENST00000368979 CYP4V2Q6ZWL3 525 aaPredicted RBP24.98■■□□□ 1.59
SNX3-203ENST00000368979 SLC13A5Q86YT5 568 aaPredicted RBP24.98■■□□□ 1.59
SNX3-203ENST00000368979 TTC9BQ8N6N2 239 aa24.98■■□□□ 1.59
SNX3-203ENST00000368979 TSC1Q92574 1164 aa24.98■■□□□ 1.59
SNX3-203ENST00000368979 NT5C3BQ969T7 300 aa24.98■■□□□ 1.59
SNX3-203ENST00000368979 RBM41Q96IZ5 413 aaKnown RBP24.98■■□□□ 1.59
SNX3-203ENST00000368979 PEBP4Q96S96 227 aa24.98■■□□□ 1.59
SNX3-203ENST00000368979 RAD9AQ99638 391 aa24.98■■□□□ 1.59
SNX3-203ENST00000368979 LBHD1Q9BQE6 289 aaPredicted RBP24.98■■□□□ 1.59
SNX3-203ENST00000368979 ADAM33Q9BZ11 813 aa24.98■■□□□ 1.59
SNX3-203ENST00000368979 CRISPLD1Q9H336 500 aa24.98■■□□□ 1.59
SNX3-203ENST00000368979 LTFP02788 710 aa24.97■■□□□ 1.59
SNX3-203ENST00000368979 KRT1P04264 644 aa24.97■■□□□ 1.59
SNX3-203ENST00000368979 ATP2A2P16615 1042 aaKnown RBP24.97■■□□□ 1.59
SNX3-203ENST00000368979 GPR15P49685 360 aa24.97■■□□□ 1.59
SNX3-203ENST00000368979 HDAC4P56524 1084 aa24.97■■□□□ 1.59
SNX3-203ENST00000368979 ELF2Q15723 593 aa24.97■■□□□ 1.59
SNX3-203ENST00000368979 BNIPLQ7Z465 357 aa24.97■■□□□ 1.59
SNX3-203ENST00000368979 RCOR2Q8IZ40 523 aa24.97■■□□□ 1.59
SNX3-203ENST00000368979 SCAMP5Q8TAC9 235 aa24.97■■□□□ 1.59
SNX3-203ENST00000368979 CLSTN3Q9BQT9 956 aa24.97■■□□□ 1.59
SNX3-203ENST00000368979 MTIF3Q9H2K0 278 aaKnown RBP24.97■■□□□ 1.59
SNX3-203ENST00000368979 ZWILCHQ9H900 591 aa24.97■■□□□ 1.59
SNX3-203ENST00000368979 NGRNQ9NPE2 291 aaKnown RBP24.97■■□□□ 1.59
SNX3-203ENST00000368979 KLHL11Q9NVR0 708 aa24.97■■□□□ 1.59
SNX3-203ENST00000368979 STK39Q9UEW8 545 aa24.97■■□□□ 1.59
SNX3-203ENST00000368979 CCDC188H7C350 402 aa24.96■■□□□ 1.59
SNX3-203ENST00000368979 KRIT1O00522 736 aa24.96■■□□□ 1.59
SNX3-203ENST00000368979 HAPLN1P10915 354 aaPredicted RBP24.96■■□□□ 1.59
SNX3-203ENST00000368979 RPL17P18621 184 aaKnown RBP24.96■■□□□ 1.59
SNX3-203ENST00000368979 DDR2Q16832 855 aa24.96■■□□□ 1.59
SNX3-203ENST00000368979 SLC25A52Q3SY17 297 aa24.96■■□□□ 1.59
SNX3-203ENST00000368979 OTUD1Q5VV17 481 aaPredicted RBP24.96■■□□□ 1.59
SNX3-203ENST00000368979 STRADAQ7RTN6 431 aa24.96■■□□□ 1.59
SNX3-203ENST00000368979 GPR65Q8IYL9 337 aa24.96■■□□□ 1.59
SNX3-203ENST00000368979 SLITRK1Q96PX8 696 aa24.96■■□□□ 1.59
SNX3-203ENST00000368979 TBCBQ99426 244 aa24.96■■□□□ 1.59
SNX3-203ENST00000368979 NPY6RQ99463 290 aa24.96■■□□□ 1.59
SNX3-203ENST00000368979 AP1M1Q9BXS5 423 aa24.96■■□□□ 1.59
SNX3-203ENST00000368979 PCSK1NQ9UHG2 260 aa24.96■■□□□ 1.59
SNX3-203ENST00000368979 PLXNA3P51805 1871 aa24.96■■□□□ 1.59
SNX3-203ENST00000368979 C2CD2LO14523 706 aa24.96■■□□□ 1.59
SNX3-203ENST00000368979 FSCN2O14926 492 aa24.96■■□□□ 1.59
SNX3-203ENST00000368979 FGF18O76093 207 aa24.96■■□□□ 1.59
SNX3-203ENST00000368979 URODP06132 367 aa24.96■■□□□ 1.59
SNX3-203ENST00000368979 OR1D2P34982 312 aa24.96■■□□□ 1.59
SNX3-203ENST00000368979 SULT1E1P49888 294 aa24.96■■□□□ 1.59
SNX3-203ENST00000368979 SMTNL2Q2TAL5 461 aa24.96■■□□□ 1.59
SNX3-203ENST00000368979 DCAF6Q58WW2 860 aa24.96■■□□□ 1.59
SNX3-203ENST00000368979 SYPL2Q5VXT5 272 aa24.96■■□□□ 1.59
SNX3-203ENST00000368979 VPS52Q8N1B4 723 aa24.96■■□□□ 1.59
SNX3-203ENST00000368979 NUP93Q8N1F7 819 aa24.96■■□□□ 1.59
SNX3-203ENST00000368979 DPF3Q92784 378 aa24.96■■□□□ 1.59
SNX3-203ENST00000368979 ACSF2Q96CM8 615 aaPredicted RBP24.96■■□□□ 1.59
SNX3-203ENST00000368979 STAP1Q9ULZ2 295 aa24.96■■□□□ 1.59
SNX3-203ENST00000368979 NAALADL1Q9UQQ1 740 aa24.96■■□□□ 1.59
SNX3-203ENST00000368979 PRPSAP2O60256 369 aa24.95■■□□□ 1.58
SNX3-203ENST00000368979 ENDOD1O94919 500 aa24.95■■□□□ 1.58
SNX3-203ENST00000368979 RARAP10276 462 aa24.95■■□□□ 1.58
SNX3-203ENST00000368979 PTPN7P35236 360 aa24.95■■□□□ 1.58
SNX3-203ENST00000368979 COPS2P61201 443 aa24.95■■□□□ 1.58
SNX3-203ENST00000368979 SMC1AQ14683 1233 aaKnown RBP24.95■■□□□ 1.58
SNX3-203ENST00000368979 KCNT1Q5JUK3 1230 aa24.95■■□□□ 1.58
SNX3-203ENST00000368979 SDHAF4Q5VUM1 108 aa24.95■■□□□ 1.58
SNX3-203ENST00000368979 BEND5Q7L4P6 421 aa24.95■■□□□ 1.58
SNX3-203ENST00000368979 ANKS1BQ7Z6G8 1248 aa24.95■■□□□ 1.58
SNX3-203ENST00000368979 CCDC50Q8IVM0 306 aa24.95■■□□□ 1.58
SNX3-203ENST00000368979 RAPGEF5Q92565 580 aa24.95■■□□□ 1.58
SNX3-203ENST00000368979 RNF25Q96BH1 459 aaPredicted RBP24.95■■□□□ 1.58
SNX3-203ENST00000368979 HERPUD2Q9BSE4 406 aa24.95■■□□□ 1.58
SNX3-203ENST00000368979 IL37Q9NZH6 218 aa24.95■■□□□ 1.58
SNX3-203ENST00000368979 CALCOCO1Q9P1Z2 691 aa24.95■■□□□ 1.58
SNX3-203ENST00000368979 SLC27A5Q9Y2P5 690 aa24.95■■□□□ 1.58
SNX3-203ENST00000368979 NR2E1Q9Y466 385 aa24.95■■□□□ 1.58
SNX3-203ENST00000368979 MYO16Q9Y6X6 1858 aa24.94■■□□□ 1.58
SNX3-203ENST00000368979 C3orf70A6NLC5 250 aaPredicted RBP24.94■■□□□ 1.58
SNX3-203ENST00000368979 PI4K2BG5E9Z4 385 aa24.94■■□□□ 1.58
SNX3-203ENST00000368979 DYNC1I1O14576 645 aa24.94■■□□□ 1.58
SNX3-203ENST00000368979 TLL1O43897 1013 aa24.94■■□□□ 1.58
SNX3-203ENST00000368979 SIX1Q15475 284 aaPredicted RBP24.94■■□□□ 1.58
SNX3-203ENST00000368979 MGAT5BQ3V5L5 792 aa24.94■■□□□ 1.58
SNX3-203ENST00000368979 ZFYVE27Q5T4F4 411 aa24.94■■□□□ 1.58
SNX3-203ENST00000368979 MFSD7Q6UXD7 560 aa24.94■■□□□ 1.58
SNX3-203ENST00000368979 ZDHHC14Q8IZN3 488 aa24.94■■□□□ 1.58
SNX3-203ENST00000368979 GPR161Q8N6U8 529 aaKnown RBP24.94■■□□□ 1.58
SNX3-203ENST00000368979 CMASQ8NFW8 434 aaPredicted RBP24.94■■□□□ 1.58
SNX3-203ENST00000368979 TEKT4Q8WW24 435 aa24.94■■□□□ 1.58
SNX3-203ENST00000368979 SPATA17Q96L03 361 aa24.94■■□□□ 1.58
SNX3-203ENST00000368979 SEPT5Q99719 369 aaPredicted RBP24.94■■□□□ 1.58
SNX3-203ENST00000368979 ZBP1Q9H171 429 aa24.94■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms