RNA–Protein interactions for RNA: ENST00000368843.7

SNX27-203, Transcript of sorting nexin family member 27, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SNX27, Length 7,197 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-203ENST00000368843 MAP1SQ66K74 1059 aaPredicted RBP18.51■□□□□ 0.55
SNX27-203ENST00000368843 TPCN2Q8NHX9 752 aa18.51■□□□□ 0.55
SNX27-203ENST00000368843 ERP27Q96DN0 273 aa18.51■□□□□ 0.55
SNX27-203ENST00000368843 KRT84Q9NSB2 600 aa18.51■□□□□ 0.55
SNX27-203ENST00000368843 NKRFO15226 690 aaKnown RBP eCLIP18.51■□□□□ 0.55
SNX27-203ENST00000368843 SERPINB5P36952 375 aa18.51■□□□□ 0.55
SNX27-203ENST00000368843 TFDP3Q5H9I0 405 aa18.51■□□□□ 0.55
SNX27-203ENST00000368843 DENND1BQ6P3S1 775 aa18.51■□□□□ 0.55
SNX27-203ENST00000368843 VN1R5Q7Z5H4 357 aa18.51■□□□□ 0.55
SNX27-203ENST00000368843 SGSM3Q96HU1 749 aa18.51■□□□□ 0.55
SNX27-203ENST00000368843 BLOC1S6Q9UL45 172 aa18.51■□□□□ 0.55
SNX27-203ENST00000368843 USP18Q9UMW8 372 aa18.51■□□□□ 0.55
SNX27-203ENST00000368843 TDRKHQ9Y2W6 561 aaKnown RBP18.51■□□□□ 0.55
SNX27-203ENST00000368843 KRT20P35900 424 aa18.51■□□□□ 0.55
SNX27-203ENST00000368843 BTG3Q14201 252 aaPredicted RBP18.51■□□□□ 0.55
SNX27-203ENST00000368843 P3H2Q8IVL5 708 aa18.51■□□□□ 0.55
SNX27-203ENST00000368843 CSGALNACT1Q8TDX6 532 aa18.51■□□□□ 0.55
SNX27-203ENST00000368843 TMEM176AQ96HP8 235 aa18.51■□□□□ 0.55
SNX27-203ENST00000368843 SPATC1LQ9H0A9 340 aa18.51■□□□□ 0.55
SNX27-203ENST00000368843 RMND5AQ9H871 391 aa18.51■□□□□ 0.55
SNX27-203ENST00000368843 FBXO10Q9UK96 956 aa18.51■□□□□ 0.55
SNX27-203ENST00000368843 CXCL8P10145 99 aa18.5■□□□□ 0.55
SNX27-203ENST00000368843 TNNI3P19429 210 aa18.5■□□□□ 0.55
SNX27-203ENST00000368843 NUDT2P50583 147 aa18.5■□□□□ 0.55
SNX27-203ENST00000368843 TRIM69Q86WT6 500 aa18.5■□□□□ 0.55
SNX27-203ENST00000368843 CACUL1Q86Y37 369 aa18.5■□□□□ 0.55
SNX27-203ENST00000368843 DMAP1Q9NPF5 467 aaPredicted RBP18.5■□□□□ 0.55
SNX27-203ENST00000368843 SMNDC1O75940 238 aaKnown RBP eCLIP18.5■□□□□ 0.55
SNX27-203ENST00000368843 MSH3P20585 1137 aa18.5■□□□□ 0.55
SNX27-203ENST00000368843 IGFBP4P22692 258 aa18.5■□□□□ 0.55
SNX27-203ENST00000368843 PDK2Q15119 407 aa18.5■□□□□ 0.55
SNX27-203ENST00000368843 KLC4Q9NSK0 619 aa18.5■□□□□ 0.55
SNX27-203ENST00000368843 H0YC42 278 aa18.5■□□□□ 0.55
SNX27-203ENST00000368843 ZBTB22O15209 634 aa18.5■□□□□ 0.55
SNX27-203ENST00000368843 GYPCP04921 128 aa18.5■□□□□ 0.55
SNX27-203ENST00000368843 RUNX1T1Q06455 604 aa18.5■□□□□ 0.55
SNX27-203ENST00000368843 B3GALNT2Q8NCR0 500 aa18.5■□□□□ 0.55
SNX27-203ENST00000368843 AHCYL2Q96HN2 611 aaKnown RBP18.5■□□□□ 0.55
SNX27-203ENST00000368843 CDK5RAP1Q96SZ6 601 aaKnown RBP18.5■□□□□ 0.55
SNX27-203ENST00000368843 CBWD1Q9BRT8 395 aa18.5■□□□□ 0.55
SNX27-203ENST00000368843 ERP44Q9BS26 406 aa18.5■□□□□ 0.55
SNX27-203ENST00000368843 FOXP3Q9BZS1 431 aa18.5■□□□□ 0.55
SNX27-203ENST00000368843 UBE2OQ9C0C9 1292 aaKnown RBP18.5■□□□□ 0.55
SNX27-203ENST00000368843 TMEM245Q9H330 911 aa18.5■□□□□ 0.55
SNX27-203ENST00000368843 ATXN3LQ9H3M9 355 aa18.5■□□□□ 0.55
SNX27-203ENST00000368843 PPP2R3BQ9Y5P8 575 aa18.5■□□□□ 0.55
SNX27-203ENST00000368843 MGAT4DA6NG13 374 aa18.5■□□□□ 0.55
SNX27-203ENST00000368843 B2RBV5 119 aa18.5■□□□□ 0.55
SNX27-203ENST00000368843 PSMD12O00232 456 aaPredicted RBP18.5■□□□□ 0.55
SNX27-203ENST00000368843 GARTP22102 1010 aa18.5■□□□□ 0.55
SNX27-203ENST00000368843 FAM131BQ86XD5 332 aa18.5■□□□□ 0.55
SNX27-203ENST00000368843 PPP1R14AQ96A00 147 aa18.5■□□□□ 0.55
SNX27-203ENST00000368843 MFSD1Q9H3U5 465 aa18.5■□□□□ 0.55
SNX27-203ENST00000368843 UBP1Q9NZI7 540 aa18.5■□□□□ 0.55
SNX27-203ENST00000368843 AP4E1Q9UPM8 1137 aa18.5■□□□□ 0.55
SNX27-203ENST00000368843 F9P00740 461 aa18.5■□□□□ 0.55
SNX27-203ENST00000368843 SCNN1BP51168 640 aa18.5■□□□□ 0.55
SNX27-203ENST00000368843 FAM171A1Q5VUB5 890 aa18.5■□□□□ 0.55
SNX27-203ENST00000368843 CNPY4Q8N129 248 aa18.5■□□□□ 0.55
SNX27-203ENST00000368843 USP38Q8NB14 1042 aa18.5■□□□□ 0.55
SNX27-203ENST00000368843 EDEM1Q92611 657 aa18.5■□□□□ 0.55
SNX27-203ENST00000368843 SNX8Q9Y5X2 465 aa18.5■□□□□ 0.55
SNX27-203ENST00000368843 RNF103O00237 685 aa18.5■□□□□ 0.55
SNX27-203ENST00000368843 FBXO21O94952 628 aa18.5■□□□□ 0.55
SNX27-203ENST00000368843 PPP4CP60510 307 aa18.5■□□□□ 0.55
SNX27-203ENST00000368843 MFSD10Q14728 455 aa18.5■□□□□ 0.55
SNX27-203ENST00000368843 RIBC1Q8N443 379 aaPredicted RBP18.5■□□□□ 0.55
SNX27-203ENST00000368843 ATG4AQ8WYN0 398 aa18.5■□□□□ 0.55
SNX27-203ENST00000368843 THAP11Q96EK4 314 aa18.5■□□□□ 0.55
SNX27-203ENST00000368843 FOXN3O00409 490 aaPredicted RBP18.49■□□□□ 0.55
SNX27-203ENST00000368843 TRMT11Q7Z4G4 463 aaKnown RBP18.49■□□□□ 0.55
SNX27-203ENST00000368843 DAGLBQ8NCG7 672 aa18.49■□□□□ 0.55
SNX27-203ENST00000368843 FAR2Q96K12 515 aa18.49■□□□□ 0.55
SNX27-203ENST00000368843 IMPAD1Q9NX62 359 aa18.49■□□□□ 0.55
SNX27-203ENST00000368843 TRIM17Q9Y577 477 aa18.49■□□□□ 0.55
SNX27-203ENST00000368843 PPP1R3GB7ZBB8 358 aa18.49■□□□□ 0.55
SNX27-203ENST00000368843 HALP42357 657 aa18.49■□□□□ 0.55
SNX27-203ENST00000368843 AGBL2Q5U5Z8 902 aa18.49■□□□□ 0.55
SNX27-203ENST00000368843 MTSS1LQ765P7 747 aa18.49■□□□□ 0.55
SNX27-203ENST00000368843 TXNRD3Q86VQ6 643 aa18.49■□□□□ 0.55
SNX27-203ENST00000368843 GMCL1P1Q8NEA9 526 aa18.49■□□□□ 0.55
SNX27-203ENST00000368843 KANSL3Q9P2N6 904 aa18.49■□□□□ 0.55
SNX27-203ENST00000368843 CAPN15O75808 1086 aa18.49■□□□□ 0.55
SNX27-203ENST00000368843 WDR49Q8IV35 697 aa18.49■□□□□ 0.55
SNX27-203ENST00000368843 FAM111AQ96PZ2 611 aa18.49■□□□□ 0.55
SNX27-203ENST00000368843 DCDC2Q9UHG0 476 aa18.49■□□□□ 0.55
SNX27-203ENST00000368843 H3BRB1 525 aa18.49■□□□□ 0.55
SNX27-203ENST00000368843 VEGFAP15692 232 aaPredicted RBP18.49■□□□□ 0.55
SNX27-203ENST00000368843 ELMO3Q96BJ8 720 aa18.49■□□□□ 0.55
SNX27-203ENST00000368843 ILKAPQ9H0C8 392 aaPredicted RBP18.49■□□□□ 0.55
SNX27-203ENST00000368843 TUT1Q9H6E5 874 aaKnown RBP18.49■□□□□ 0.55
SNX27-203ENST00000368843 KIAA1257Q9ULG3 409 aa18.49■□□□□ 0.55
SNX27-203ENST00000368843 PSMA3P25788 255 aa18.49■□□□□ 0.55
SNX27-203ENST00000368843 ALDH9A1P49189 494 aa18.49■□□□□ 0.55
SNX27-203ENST00000368843 TFAP2DQ7Z6R9 452 aa18.49■□□□□ 0.55
SNX27-203ENST00000368843 RNPEPQ9H4A4 650 aa18.49■□□□□ 0.55
SNX27-203ENST00000368843 GLP2RO95838 553 aa18.48■□□□□ 0.55
SNX27-203ENST00000368843 GHRP10912 638 aa18.48■□□□□ 0.55
SNX27-203ENST00000368843 MAPK1P28482 360 aa18.48■□□□□ 0.55
SNX27-203ENST00000368843 SREBF1P36956 1147 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms