RNA–Protein interactions for RNA: ENST00000368690.7

CHTOP-203, Transcript of chromatin target of PRMT1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CHTOP, Length 2,165 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-203ENST00000368690 ACAP3Q96P50 834 aa18.11■□□□□ 0.49
CHTOP-203ENST00000368690 UBIAD1Q9Y5Z9 338 aa18.11■□□□□ 0.49
CHTOP-203ENST00000368690 SDR42E2A6NKP2 422 aa18.11■□□□□ 0.49
CHTOP-203ENST00000368690 MSLNQ13421 630 aaPredicted RBP18.11■□□□□ 0.49
CHTOP-203ENST00000368690 MYBPC3Q14896 1274 aa18.11■□□□□ 0.49
CHTOP-203ENST00000368690 ANKRD20A4Q4UJ75 823 aa18.11■□□□□ 0.49
CHTOP-203ENST00000368690 SFT2D3Q587I9 215 aa18.11■□□□□ 0.49
CHTOP-203ENST00000368690 SMYD5Q6GMV2 418 aa18.11■□□□□ 0.49
CHTOP-203ENST00000368690 TMEM270Q6UE05 265 aa18.11■□□□□ 0.49
CHTOP-203ENST00000368690 USP50Q70EL3 339 aaPredicted RBP18.11■□□□□ 0.49
CHTOP-203ENST00000368690 ARCQ7LC44 396 aa18.11■□□□□ 0.49
CHTOP-203ENST00000368690 KLRG1Q96E93 195 aa18.11■□□□□ 0.49
CHTOP-203ENST00000368690 FAM213AQ9BRX8 229 aa18.11■□□□□ 0.49
CHTOP-203ENST00000368690 FRMD8Q9BZ67 464 aaPredicted RBP18.11■□□□□ 0.49
CHTOP-203ENST00000368690 FBXO28Q9NVF7 368 aa18.11■□□□□ 0.49
CHTOP-203ENST00000368690 CHMP2BQ9UQN3 213 aa18.11■□□□□ 0.49
CHTOP-203ENST00000368690 HBS1LQ9Y450 684 aaKnown RBP18.11■□□□□ 0.49
CHTOP-203ENST00000368690 SSC5DA1L4H1 1573 aa18.1■□□□□ 0.49
CHTOP-203ENST00000368690 TCRBV7S3A2A0A539 114 aa18.1■□□□□ 0.49
CHTOP-203ENST00000368690 PRR5-ARHGAP8B1AHC4 643 aa18.1■□□□□ 0.49
CHTOP-203ENST00000368690 PIAS1O75925 651 aa18.1■□□□□ 0.49
CHTOP-203ENST00000368690 ELK3P41970 407 aa18.1■□□□□ 0.49
CHTOP-203ENST00000368690 GRIA2P42262 883 aa18.1■□□□□ 0.49
CHTOP-203ENST00000368690 AQP5P55064 265 aa18.1■□□□□ 0.49
CHTOP-203ENST00000368690 ARHGAP8P85298 464 aa18.1■□□□□ 0.49
CHTOP-203ENST00000368690 XKR9Q5GH70 373 aa18.1■□□□□ 0.49
CHTOP-203ENST00000368690 TDRD10Q5VZ19 366 aaKnown RBP18.1■□□□□ 0.49
CHTOP-203ENST00000368690 LENG1Q96BZ8 264 aaPredicted RBP18.1■□□□□ 0.49
CHTOP-203ENST00000368690 NLRP4Q96MN2 994 aa18.1■□□□□ 0.49
CHTOP-203ENST00000368690 ZNF518BQ9C0D4 1074 aa18.1■□□□□ 0.49
CHTOP-203ENST00000368690 TRDMT1O14717 391 aaKnown RBP18.1■□□□□ 0.49
CHTOP-203ENST00000368690 KLHL2O95198 593 aa18.1■□□□□ 0.49
CHTOP-203ENST00000368690 KRT7P08729 469 aa18.1■□□□□ 0.49
CHTOP-203ENST00000368690 PTPRAP18433 802 aa18.1■□□□□ 0.49
CHTOP-203ENST00000368690 JAK3P52333 1124 aa18.1■□□□□ 0.49
CHTOP-203ENST00000368690 ZNF132P52740 706 aa18.1■□□□□ 0.49
CHTOP-203ENST00000368690 OGDHQ02218 1023 aa18.1■□□□□ 0.49
CHTOP-203ENST00000368690 TKFCQ3LXA3 575 aa18.1■□□□□ 0.49
CHTOP-203ENST00000368690 ARMC3Q5W041 872 aa18.1■□□□□ 0.49
CHTOP-203ENST00000368690 TXNRD3NBQ6F5E7 133 aa18.1■□□□□ 0.49
CHTOP-203ENST00000368690 PGM2L1Q6PCE3 622 aa18.1■□□□□ 0.49
CHTOP-203ENST00000368690 DCUN1D2Q6PH85 259 aa18.1■□□□□ 0.49
CHTOP-203ENST00000368690 CDHR3Q6ZTQ4 885 aa18.1■□□□□ 0.49
CHTOP-203ENST00000368690 FAM160B2Q86V87 743 aa18.1■□□□□ 0.49
CHTOP-203ENST00000368690 NCAPG2Q86XI2 1143 aa18.1■□□□□ 0.49
CHTOP-203ENST00000368690 MCEEQ96PE7 176 aa18.1■□□□□ 0.49
CHTOP-203ENST00000368690 AS3MTQ9HBK9 375 aa18.1■□□□□ 0.49
CHTOP-203ENST00000368690 ZNF112Q9UJU3 913 aa18.1■□□□□ 0.49
CHTOP-203ENST00000368690 ITGA11Q9UKX5 1188 aa18.1■□□□□ 0.49
CHTOP-203ENST00000368690 AGTPBP1Q9UPW5 1226 aa18.1■□□□□ 0.49
CHTOP-203ENST00000368690 DOCK1Q14185 1865 aa18.09■□□□□ 0.49
CHTOP-203ENST00000368690 IQCA1LA6NCM1 817 aa18.09■□□□□ 0.49
CHTOP-203ENST00000368690 TRIM49D1C9J1S8 452 aa18.09■□□□□ 0.49
CHTOP-203ENST00000368690 KBTBD13C9JR72 458 aa18.09■□□□□ 0.49
CHTOP-203ENST00000368690 HNRNPDLO14979 420 aaKnown RBP18.09■□□□□ 0.49
CHTOP-203ENST00000368690 C1QAP02745 245 aa18.09■□□□□ 0.49
CHTOP-203ENST00000368690 ITGA2BP08514 1039 aa18.09■□□□□ 0.49
CHTOP-203ENST00000368690 CCDC166P0CW27 439 aa18.09■□□□□ 0.49
CHTOP-203ENST00000368690 TTLL12Q14166 644 aaPredicted RBP18.09■□□□□ 0.49
CHTOP-203ENST00000368690 PDK3Q15120 406 aa18.09■□□□□ 0.49
CHTOP-203ENST00000368690 CHI3L2Q15782 390 aa18.09■□□□□ 0.49
CHTOP-203ENST00000368690 UGT2A3Q6UWM9 527 aa18.09■□□□□ 0.49
CHTOP-203ENST00000368690 IGDCC3Q8IVU1 814 aa18.09■□□□□ 0.49
CHTOP-203ENST00000368690 GSTCDQ8NEC7 633 aa18.09■□□□□ 0.49
CHTOP-203ENST00000368690 KIFC3Q9BVG8 833 aa18.09■□□□□ 0.49
CHTOP-203ENST00000368690 GALNT8Q9NY28 637 aa18.09■□□□□ 0.49
CHTOP-203ENST00000368690 PLK2Q9NYY3 685 aa18.09■□□□□ 0.49
CHTOP-203ENST00000368690 CLEC11AQ9Y240 323 aa18.09■□□□□ 0.49
CHTOP-203ENST00000368690 A6NJR5 290 aa18.08■□□□□ 0.49
CHTOP-203ENST00000368690 H0YCG3 227 aa18.08■□□□□ 0.49
CHTOP-203ENST00000368690 ZNF862O60290 1169 aa18.08■□□□□ 0.49
CHTOP-203ENST00000368690 CST8O60676 142 aa18.08■□□□□ 0.49
CHTOP-203ENST00000368690 VNN1O95497 513 aa18.08■□□□□ 0.49
CHTOP-203ENST00000368690 WEE2P0C1S8 567 aa18.08■□□□□ 0.49
CHTOP-203ENST00000368690 SFNP31947 248 aa18.08■□□□□ 0.49
CHTOP-203ENST00000368690 PDE1BQ01064 536 aa18.08■□□□□ 0.49
CHTOP-203ENST00000368690 DPYSL3Q14195 570 aa18.08■□□□□ 0.49
CHTOP-203ENST00000368690 UGCGQ16739 394 aa18.08■□□□□ 0.49
CHTOP-203ENST00000368690 MMEL1Q495T6 779 aa18.08■□□□□ 0.49
CHTOP-203ENST00000368690 RNF111Q6ZNA4 994 aa18.08■□□□□ 0.49
CHTOP-203ENST00000368690 NUDCD3Q8IVD9 361 aa18.08■□□□□ 0.49
CHTOP-203ENST00000368690 ZNF280CQ8ND82 737 aa18.08■□□□□ 0.49
CHTOP-203ENST00000368690 GDPD5Q8WTR4 605 aa18.08■□□□□ 0.49
CHTOP-203ENST00000368690 ZNF606Q8WXB4 792 aa18.08■□□□□ 0.49
CHTOP-203ENST00000368690 SUDS3Q9H7L9 328 aaPredicted RBP18.08■□□□□ 0.49
CHTOP-203ENST00000368690 APOBEC3GQ9HC16 384 aaKnown RBP18.08■□□□□ 0.49
CHTOP-203ENST00000368690 THAP1Q9NVV9 213 aa18.08■□□□□ 0.49
CHTOP-203ENST00000368690 FEM1BQ9UK73 627 aa18.08■□□□□ 0.49
CHTOP-203ENST00000368690 TTLL13PA6NNM8 815 aa18.08■□□□□ 0.48
CHTOP-203ENST00000368690 ETS2P15036 469 aa18.08■□□□□ 0.48
CHTOP-203ENST00000368690 RPL5P46777 297 aaKnown RBP18.08■□□□□ 0.48
CHTOP-203ENST00000368690 ALDH18A1P54886 795 aaKnown RBP18.08■□□□□ 0.48
CHTOP-203ENST00000368690 MRPS5P82675 430 aaKnown RBP18.08■□□□□ 0.48
CHTOP-203ENST00000368690 GHRHRQ02643 423 aa18.08■□□□□ 0.48
CHTOP-203ENST00000368690 LDHDQ86WU2 507 aa18.08■□□□□ 0.48
CHTOP-203ENST00000368690 ACTRT2Q8TDY3 377 aa18.08■□□□□ 0.48
CHTOP-203ENST00000368690 BSNDQ8WZ55 320 aa18.08■□□□□ 0.48
CHTOP-203ENST00000368690 LPAR1Q92633 364 aa18.08■□□□□ 0.48
CHTOP-203ENST00000368690 PPP1R14BQ96C90 147 aa18.08■□□□□ 0.48
CHTOP-203ENST00000368690 PRICKLE1Q96MT3 831 aaPredicted RBP18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms