RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 TSPYL2Q9H2G4 693 aaPredicted RBP11.14□□□□□ -0.63
TPM3-212ENST00000368533 SNX25Q9H3E2 840 aa11.14□□□□□ -0.63
TPM3-212ENST00000368533 CNOT10Q9H9A5 744 aaKnown RBP11.14□□□□□ -0.63
TPM3-212ENST00000368533 UVRAGQ9P2Y5 699 aa11.14□□□□□ -0.63
TPM3-212ENST00000368533 GGA2Q9UJY4 613 aa11.14□□□□□ -0.63
TPM3-212ENST00000368533 CORO1CQ9ULV4 474 aaPredicted RBP11.14□□□□□ -0.63
TPM3-212ENST00000368533 PCDHA3Q9Y5H8 950 aa11.14□□□□□ -0.63
TPM3-212ENST00000368533 RTN3O95197 1032 aaPredicted RBP11.13□□□□□ -0.63
TPM3-212ENST00000368533 THP07101 528 aa11.13□□□□□ -0.63
TPM3-212ENST00000368533 NEFHP12036 1026 aa11.13□□□□□ -0.63
TPM3-212ENST00000368533 TAF6P49848 677 aa11.13□□□□□ -0.63
TPM3-212ENST00000368533 MGAT3Q09327 533 aa11.13□□□□□ -0.63
TPM3-212ENST00000368533 IRF5Q13568 498 aa11.13□□□□□ -0.63
TPM3-212ENST00000368533 LRRC14Q15048 493 aa11.13□□□□□ -0.63
TPM3-212ENST00000368533 ANKRD20A2Q5SQ80 823 aa11.13□□□□□ -0.63
TPM3-212ENST00000368533 PPP1R15BQ5SWA1 713 aa11.13□□□□□ -0.63
TPM3-212ENST00000368533 C6orf118Q5T5N4 469 aa11.13□□□□□ -0.63
TPM3-212ENST00000368533 ANKRD20A1Q5TYW2 823 aa11.13□□□□□ -0.63
TPM3-212ENST00000368533 ANKRD20A3Q5VUR7 823 aa11.13□□□□□ -0.63
TPM3-212ENST00000368533 ANKRD42Q8N9B4 389 aa11.13□□□□□ -0.63
TPM3-212ENST00000368533 APPL2Q8NEU8 664 aa11.13□□□□□ -0.63
TPM3-212ENST00000368533 LRRN4Q8WUT4 740 aa11.13□□□□□ -0.63
TPM3-212ENST00000368533 CHMP6Q96FZ7 201 aa11.13□□□□□ -0.63
TPM3-212ENST00000368533 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.13□□□□□ -0.63
TPM3-212ENST00000368533 C10orf88Q9H8K7 445 aa11.13□□□□□ -0.63
TPM3-212ENST00000368533 PLEKHA5Q9HAU0 1116 aa11.13□□□□□ -0.63
TPM3-212ENST00000368533 PARVAQ9NVD7 372 aa11.13□□□□□ -0.63
TPM3-212ENST00000368533 PCYOX1Q9UHG3 505 aa11.13□□□□□ -0.63
TPM3-212ENST00000368533 PRG3Q9Y2Y8 225 aaPredicted RBP11.13□□□□□ -0.63
TPM3-212ENST00000368533 MRPL42Q9Y6G3 142 aaKnown RBP11.13□□□□□ -0.63
TPM3-212ENST00000368533 GPR182O15218 404 aa11.13□□□□□ -0.63
TPM3-212ENST00000368533 B4GALT3O60512 393 aa11.13□□□□□ -0.63
TPM3-212ENST00000368533 HUS1O60921 280 aa11.13□□□□□ -0.63
TPM3-212ENST00000368533 KRT3P12035 628 aa11.13□□□□□ -0.63
TPM3-212ENST00000368533 PSMA2P25787 234 aa11.13□□□□□ -0.63
TPM3-212ENST00000368533 CTNNA2P26232 953 aa11.13□□□□□ -0.63
TPM3-212ENST00000368533 TKTP29401 623 aaKnown RBP11.13□□□□□ -0.63
TPM3-212ENST00000368533 AXLP30530 894 aa11.13□□□□□ -0.63
TPM3-212ENST00000368533 ATICP31939 592 aa11.13□□□□□ -0.63
TPM3-212ENST00000368533 HADHBP55084 474 aaKnown RBP11.13□□□□□ -0.63
TPM3-212ENST00000368533 YWHAEP62258 255 aaKnown RBP11.13□□□□□ -0.63
TPM3-212ENST00000368533 RNASELQ05823 741 aaKnown RBP11.13□□□□□ -0.63
TPM3-212ENST00000368533 SLMAPQ14BN4 828 aa11.13□□□□□ -0.63
TPM3-212ENST00000368533 TAF11Q15544 211 aa11.13□□□□□ -0.63
TPM3-212ENST00000368533 SLC5A9Q2M3M2 681 aa11.13□□□□□ -0.63
TPM3-212ENST00000368533 DSTYKQ6XUX3 929 aa11.13□□□□□ -0.63
TPM3-212ENST00000368533 GSTA5Q7RTV2 222 aa11.13□□□□□ -0.63
TPM3-212ENST00000368533 DEFB128Q7Z7B8 93 aa11.13□□□□□ -0.63
TPM3-212ENST00000368533 PHF13Q86YI8 300 aaPredicted RBP11.13□□□□□ -0.63
TPM3-212ENST00000368533 ADGRF2Q8IZF7 708 aa11.13□□□□□ -0.63
TPM3-212ENST00000368533 CCDC33Q8N5R6 958 aa11.13□□□□□ -0.63
TPM3-212ENST00000368533 CCDC197Q8NCU1 140 aa11.13□□□□□ -0.63
TPM3-212ENST00000368533 PRMT1Q99873 361 aaKnown RBP11.13□□□□□ -0.63
TPM3-212ENST00000368533 DDX23Q9BUQ8 820 aaKnown RBP11.13□□□□□ -0.63
TPM3-212ENST00000368533 CHST7Q9NS84 486 aa11.13□□□□□ -0.63
TPM3-212ENST00000368533 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.13□□□□□ -0.63
TPM3-212ENST00000368533 ZFATQ9P243 1243 aa11.13□□□□□ -0.63
TPM3-212ENST00000368533 SAE1Q9UBE0 346 aaPredicted RBP11.13□□□□□ -0.63
TPM3-212ENST00000368533 TBK1Q9UHD2 729 aa11.13□□□□□ -0.63
TPM3-212ENST00000368533 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.13□□□□□ -0.63
TPM3-212ENST00000368533 UNC80Q8N2C7 3258 aa11.13□□□□□ -0.63
TPM3-212ENST00000368533 C5orf42Q9H799 3197 aa11.13□□□□□ -0.63
TPM3-212ENST00000368533 THSD7BQ9C0I4 1608 aa11.13□□□□□ -0.63
TPM3-212ENST00000368533 BHMG1C9JSJ3 638 aaPredicted RBP11.13□□□□□ -0.63
TPM3-212ENST00000368533 MAP3K6O95382 1288 aa11.13□□□□□ -0.63
TPM3-212ENST00000368533 HOXD11P31277 338 aaPredicted RBP11.13□□□□□ -0.63
TPM3-212ENST00000368533 GPD2P43304 727 aa11.13□□□□□ -0.63
TPM3-212ENST00000368533 SCNN1BP51168 640 aa11.13□□□□□ -0.63
TPM3-212ENST00000368533 BLMHQ13867 455 aa11.13□□□□□ -0.63
TPM3-212ENST00000368533 KYAT1Q16773 422 aa11.13□□□□□ -0.63
TPM3-212ENST00000368533 CWF19L1Q69YN2 538 aaKnown RBP11.13□□□□□ -0.63
TPM3-212ENST00000368533 TMCO2Q7Z6W1 182 aaPredicted RBP11.13□□□□□ -0.63
TPM3-212ENST00000368533 B3GALT6Q96L58 329 aa11.13□□□□□ -0.63
TPM3-212ENST00000368533 TMEM165Q9HC07 324 aa11.13□□□□□ -0.63
TPM3-212ENST00000368533 ZMYND8Q9ULU4 1186 aaPredicted RBP11.13□□□□□ -0.63
TPM3-212ENST00000368533 KBTBD13C9JR72 458 aa11.12□□□□□ -0.63
TPM3-212ENST00000368533 PIRO00625 290 aa11.12□□□□□ -0.63
TPM3-212ENST00000368533 MED7O43513 233 aa11.12□□□□□ -0.63
TPM3-212ENST00000368533 BEST1O76090 585 aa11.12□□□□□ -0.63
TPM3-212ENST00000368533 UBOX5O94941 541 aa11.12□□□□□ -0.63
TPM3-212ENST00000368533 CSPG5O95196 566 aa11.12□□□□□ -0.63
TPM3-212ENST00000368533 KRT16P08779 473 aa11.12□□□□□ -0.63
TPM3-212ENST00000368533 GBP1P32455 592 aa11.12□□□□□ -0.63
TPM3-212ENST00000368533 ATXN1P54253 815 aaKnown RBP11.12□□□□□ -0.63
TPM3-212ENST00000368533 DRG2P55039 364 aaKnown RBP11.12□□□□□ -0.63
TPM3-212ENST00000368533 POLE2P56282 527 aa11.12□□□□□ -0.63
TPM3-212ENST00000368533 MXRA7P84157 204 aa11.12□□□□□ -0.63
TPM3-212ENST00000368533 SCYL2Q6P3W7 929 aa11.12□□□□□ -0.63
TPM3-212ENST00000368533 TRIM72Q6ZMU5 477 aa11.12□□□□□ -0.63
TPM3-212ENST00000368533 FAM183BPQ6ZVS7 135 aa11.12□□□□□ -0.63
TPM3-212ENST00000368533 RTN4RL1Q86UN2 441 aaPredicted RBP11.12□□□□□ -0.63
TPM3-212ENST00000368533 HSPH1Q92598 858 aa11.12□□□□□ -0.63
TPM3-212ENST00000368533 CFAP57Q96MR6 1250 aa11.12□□□□□ -0.63
TPM3-212ENST00000368533 MED10Q9BTT4 135 aa11.12□□□□□ -0.63
TPM3-212ENST00000368533 MAGEB5Q9BZ81 275 aa11.12□□□□□ -0.63
TPM3-212ENST00000368533 EPB41L4BQ9H329 900 aa11.12□□□□□ -0.63
TPM3-212ENST00000368533 KDM4CQ9H3R0 1056 aa11.12□□□□□ -0.63
TPM3-212ENST00000368533 RSAD1Q9HA92 442 aa11.12□□□□□ -0.63
TPM3-212ENST00000368533 HOMER3Q9NSC5 361 aa11.12□□□□□ -0.63
TPM3-212ENST00000368533 GPATCH2LQ9NWQ4 482 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms