RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 SCD5Q86SK9 330 aa14.6□□□□□ -0.07
TPM3-211ENST00000368531 TMEM110Q86TL2 294 aa14.6□□□□□ -0.07
TPM3-211ENST00000368531 VPS36Q86VN1 386 aa14.6□□□□□ -0.07
TPM3-211ENST00000368531 MON1AQ86VX9 555 aa14.6□□□□□ -0.07
TPM3-211ENST00000368531 NPAS3Q8IXF0 933 aa14.6□□□□□ -0.07
TPM3-211ENST00000368531 TTC16Q8NEE8 873 aa14.6□□□□□ -0.07
TPM3-211ENST00000368531 PDZD8Q8NEN9 1154 aa14.6□□□□□ -0.07
TPM3-211ENST00000368531 OLIG1Q8TAK6 271 aa14.6□□□□□ -0.07
TPM3-211ENST00000368531 ATXN2LQ8WWM7 1075 aaKnown RBP14.6□□□□□ -0.07
TPM3-211ENST00000368531 C18orf8Q96DM3 657 aa14.6□□□□□ -0.07
TPM3-211ENST00000368531 ASB2Q96Q27 587 aa14.6□□□□□ -0.07
TPM3-211ENST00000368531 CYP2S1Q96SQ9 504 aa14.6□□□□□ -0.07
TPM3-211ENST00000368531 C11orf70Q9BRQ4 267 aa14.6□□□□□ -0.07
TPM3-211ENST00000368531 PHF7Q9BWX1 381 aaPredicted RBP14.6□□□□□ -0.07
TPM3-211ENST00000368531 SLC46A2Q9BY10 475 aa14.6□□□□□ -0.07
TPM3-211ENST00000368531 DEF6Q9H4E7 631 aa14.6□□□□□ -0.07
TPM3-211ENST00000368531 OSER1Q9NX31 292 aa14.6□□□□□ -0.07
TPM3-211ENST00000368531 TAS2R14Q9NYV8 317 aa14.6□□□□□ -0.07
TPM3-211ENST00000368531 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.6□□□□□ -0.073e-11■□□□□ 9
TPM3-211ENST00000368531 ADAMTS1Q9UHI8 967 aa14.6□□□□□ -0.07
TPM3-211ENST00000368531 CDH7Q9ULB5 785 aa14.6□□□□□ -0.07
TPM3-211ENST00000368531 DOCK8Q8NF50 2099 aa14.6□□□□□ -0.07
TPM3-211ENST00000368531 FAM92AA1XBS5 289 aa14.59□□□□□ -0.07
TPM3-211ENST00000368531 YJEFN3A6XGL0 299 aa14.59□□□□□ -0.07
TPM3-211ENST00000368531 GOLGA6L6A8MZA4 724 aa14.59□□□□□ -0.07
TPM3-211ENST00000368531 C2CD4DB7Z1M9 353 aa14.59□□□□□ -0.07
TPM3-211ENST00000368531 E7ENQ6 273 aa14.59□□□□□ -0.07
TPM3-211ENST00000368531 GOLGA8SH3BPF8 625 aa14.59□□□□□ -0.07
TPM3-211ENST00000368531 GRAP2O75791 330 aa14.59□□□□□ -0.07
TPM3-211ENST00000368531 FBXO21O94952 628 aa14.59□□□□□ -0.07
TPM3-211ENST00000368531 PPP3CCP48454 512 aa14.59□□□□□ -0.07
TPM3-211ENST00000368531 RPL34P49207 117 aaKnown RBP14.59□□□□□ -0.07
TPM3-211ENST00000368531 SNX16P57768 344 aa14.59□□□□□ -0.07
TPM3-211ENST00000368531 YWHAGP61981 247 aaKnown RBP eCLIP14.59□□□□□ -0.07
TPM3-211ENST00000368531 BTBD8Q5XKL5 378 aa14.59□□□□□ -0.07
TPM3-211ENST00000368531 PM20D1Q6GTS8 502 aa14.59□□□□□ -0.07
TPM3-211ENST00000368531 ACAD10Q6JQN1 1059 aa14.59□□□□□ -0.07
TPM3-211ENST00000368531 OTOP3Q7RTS5 596 aa14.59□□□□□ -0.07
TPM3-211ENST00000368531 ARL14EPQ8N8R7 260 aaPredicted RBP14.59□□□□□ -0.07
TPM3-211ENST00000368531 TDRD5Q8NAT2 981 aaKnown RBP14.59□□□□□ -0.07
TPM3-211ENST00000368531 MSANTD4Q8NCY6 345 aa14.59□□□□□ -0.07
TPM3-211ENST00000368531 OVCA2Q8WZ82 227 aa14.59□□□□□ -0.07
TPM3-211ENST00000368531 EDEM1Q92611 657 aa14.59□□□□□ -0.07
TPM3-211ENST00000368531 FAM149B1Q96BN6 582 aa14.59□□□□□ -0.07
TPM3-211ENST00000368531 SLC22A12Q96S37 553 aa14.59□□□□□ -0.07
TPM3-211ENST00000368531 SMG9Q9H0W8 520 aaKnown RBP14.59□□□□□ -0.07
TPM3-211ENST00000368531 TASP1Q9H6P5 420 aa14.59□□□□□ -0.07
TPM3-211ENST00000368531 CCSER2Q9H7U1 834 aa14.59□□□□□ -0.07
TPM3-211ENST00000368531 CYLDQ9NQC7 956 aa14.59□□□□□ -0.07
TPM3-211ENST00000368531 IMPACTQ9P2X3 320 aa14.59□□□□□ -0.07
TPM3-211ENST00000368531 A0A087X0T9 212 aa14.58□□□□□ -0.08
TPM3-211ENST00000368531 TRAV19A0A0A6YYK7 116 aa14.58□□□□□ -0.08
TPM3-211ENST00000368531 AKR1B10O60218 316 aa14.58□□□□□ -0.08
TPM3-211ENST00000368531 FAM228BP0C875 321 aa14.58□□□□□ -0.08
TPM3-211ENST00000368531 RALAP11233 206 aa14.58□□□□□ -0.08
TPM3-211ENST00000368531 LAMP2P13473 410 aa14.58□□□□□ -0.08
TPM3-211ENST00000368531 RARGP13631 454 aa14.58□□□□□ -0.08
TPM3-211ENST00000368531 HDCP19113 662 aa14.58□□□□□ -0.08
TPM3-211ENST00000368531 RNASE9P60153 205 aaKnown RBP14.58□□□□□ -0.08
TPM3-211ENST00000368531 HECTD3Q5T447 861 aa14.58□□□□□ -0.08
TPM3-211ENST00000368531 BSPRYQ5W0U4 402 aa14.58□□□□□ -0.08
TPM3-211ENST00000368531 RSRC2Q7L4I2 434 aaKnown RBP14.58□□□□□ -0.08
TPM3-211ENST00000368531 BHLHA9Q7RTU4 235 aa14.58□□□□□ -0.08
TPM3-211ENST00000368531 ZSCAN18Q8TBC5 510 aaPredicted RBP14.58□□□□□ -0.08
TPM3-211ENST00000368531 ANP32BQ92688 251 aaKnown RBP14.58□□□□□ -0.08
TPM3-211ENST00000368531 GOLGA1Q92805 767 aa14.58□□□□□ -0.08
TPM3-211ENST00000368531 ACSF2Q96CM8 615 aaPredicted RBP14.58□□□□□ -0.08
TPM3-211ENST00000368531 PIWIL1Q96J94 861 aaKnown RBP14.58□□□□□ -0.08
TPM3-211ENST00000368531 NACA2Q9H009 215 aa14.58□□□□□ -0.08
TPM3-211ENST00000368531 NHEJ1Q9H9Q4 299 aaPredicted RBP14.58□□□□□ -0.08
TPM3-211ENST00000368531 ADAM22Q9P0K1 906 aa14.58□□□□□ -0.08
TPM3-211ENST00000368531 NR2E1Q9Y466 385 aa14.58□□□□□ -0.08
TPM3-211ENST00000368531 NUP210Q8TEM1 1887 aaPredicted RBP14.57□□□□□ -0.08
TPM3-211ENST00000368531 HELZP42694 1942 aaKnown RBP14.57□□□□□ -0.08
TPM3-211ENST00000368531 MDM4O15151 490 aa14.57□□□□□ -0.08
TPM3-211ENST00000368531 COCHO43405 550 aa14.57□□□□□ -0.08
TPM3-211ENST00000368531 TLR5O60602 858 aa14.57□□□□□ -0.08
TPM3-211ENST00000368531 TBX18O95935 607 aa14.57□□□□□ -0.08
TPM3-211ENST00000368531 LTFP02788 710 aa14.57□□□□□ -0.08
TPM3-211ENST00000368531 FTLP02792 175 aaPredicted RBP14.57□□□□□ -0.08
TPM3-211ENST00000368531 CKMP06732 381 aa14.57□□□□□ -0.08
TPM3-211ENST00000368531 ZDHHC11BP0C7U3 371 aa14.57□□□□□ -0.08
TPM3-211ENST00000368531 BMP1P13497 986 aa14.57□□□□□ -0.08
TPM3-211ENST00000368531 MMP8P22894 467 aa14.57□□□□□ -0.08
TPM3-211ENST00000368531 SLC6A3Q01959 620 aa14.57□□□□□ -0.08
TPM3-211ENST00000368531 CENPCQ03188 943 aa14.57□□□□□ -0.08
TPM3-211ENST00000368531 GFPT1Q06210 699 aaPredicted RBP14.57□□□□□ -0.08
TPM3-211ENST00000368531 TAF5Q15542 800 aa14.57□□□□□ -0.08
TPM3-211ENST00000368531 FAM78AQ5JUQ0 283 aa14.57□□□□□ -0.08
TPM3-211ENST00000368531 C10orf120Q5SQS8 335 aa14.57□□□□□ -0.08
TPM3-211ENST00000368531 CCDC122Q5T0U0 273 aa14.57□□□□□ -0.08
TPM3-211ENST00000368531 XYLT1Q86Y38 959 aa14.57□□□□□ -0.08
TPM3-211ENST00000368531 PHF13Q86YI8 300 aaPredicted RBP14.57□□□□□ -0.08
TPM3-211ENST00000368531 ARID3BQ8IVW6 561 aaPredicted RBP14.57□□□□□ -0.08
TPM3-211ENST00000368531 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.57□□□□□ -0.08
TPM3-211ENST00000368531 ARHGAP18Q8N392 663 aa14.57□□□□□ -0.08
TPM3-211ENST00000368531 IRGQQ8WZA9 623 aa14.57□□□□□ -0.08
TPM3-211ENST00000368531 CCDC42Q96M95 316 aa14.57□□□□□ -0.08
TPM3-211ENST00000368531 PANX2Q96RD6 677 aa14.57□□□□□ -0.08
TPM3-211ENST00000368531 RNF38Q9H0F5 515 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms