RNA–Protein interactions for RNA: ENST00000368530.6

TPM3-210, Transcript of tropomyosin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TPM3, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-210ENST00000368530 STXBP5Q5T5C0 1151 aa10.56□□□□□ -0.72
TPM3-210ENST00000368530 SCARA3Q6AZY7 606 aa10.56□□□□□ -0.72
TPM3-210ENST00000368530 ZNF662Q6ZS27 426 aa10.56□□□□□ -0.72
TPM3-210ENST00000368530 GAREM2Q75VX8 874 aa10.56□□□□□ -0.72
TPM3-210ENST00000368530 CELF5Q8N6W0 485 aaKnown RBP10.56□□□□□ -0.72
TPM3-210ENST00000368530 LEMD2Q8NC56 503 aa10.56□□□□□ -0.72
TPM3-210ENST00000368530 SLC20A1Q8WUM9 679 aa10.56□□□□□ -0.72
TPM3-210ENST00000368530 L2HGDHQ9H9P8 463 aa10.56□□□□□ -0.72
TPM3-210ENST00000368530 PLEKHA5Q9HAU0 1116 aa10.56□□□□□ -0.72
TPM3-210ENST00000368530 LUC7LQ9NQ29 371 aaKnown RBP10.56□□□□□ -0.72
TPM3-210ENST00000368530 C2orf42Q9NWW7 574 aa10.56□□□□□ -0.72
TPM3-210ENST00000368530 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.56□□□□□ -0.72
TPM3-210ENST00000368530 SALL4Q9UJQ4 1053 aa10.56□□□□□ -0.72
TPM3-210ENST00000368530 CPSF3Q9UKF6 684 aaKnown RBP10.56□□□□□ -0.72
TPM3-210ENST00000368530 V9GYY5 206 aaPredicted RBP10.56□□□□□ -0.72
TPM3-210ENST00000368530 ACACBO00763 2458 aa10.55□□□□□ -0.72
TPM3-210ENST00000368530 CHADO15335 359 aa10.55□□□□□ -0.72
TPM3-210ENST00000368530 PJA2O43164 708 aa10.55□□□□□ -0.72
TPM3-210ENST00000368530 CYP26A1O43174 497 aa10.55□□□□□ -0.72
TPM3-210ENST00000368530 PAPSS2O95340 614 aaPredicted RBP10.55□□□□□ -0.72
TPM3-210ENST00000368530 ATP1A1P05023 1023 aaKnown RBP10.55□□□□□ -0.72
TPM3-210ENST00000368530 CCDC172P0C7W6 258 aa10.55□□□□□ -0.72
TPM3-210ENST00000368530 CXCL8P10145 99 aa10.55□□□□□ -0.72
TPM3-210ENST00000368530 KRT5P13647 590 aa10.55□□□□□ -0.72
TPM3-210ENST00000368530 CPB1P15086 417 aa10.55□□□□□ -0.72
TPM3-210ENST00000368530 CYP3A5P20815 502 aa10.55□□□□□ -0.72
TPM3-210ENST00000368530 TNFAIP3P21580 790 aa10.55□□□□□ -0.72
TPM3-210ENST00000368530 CXCL12P48061 93 aa10.55□□□□□ -0.72
TPM3-210ENST00000368530 CCR3P51677 355 aa10.55□□□□□ -0.72
TPM3-210ENST00000368530 SPEM2Q0P670 501 aa10.55□□□□□ -0.72
TPM3-210ENST00000368530 DUSP4Q13115 394 aa10.55□□□□□ -0.72
TPM3-210ENST00000368530 NAA30Q147X3 362 aaPredicted RBP10.55□□□□□ -0.72
TPM3-210ENST00000368530 LPAL2Q16609 132 aa10.55□□□□□ -0.72
TPM3-210ENST00000368530 TAF3Q5VWG9 929 aa10.55□□□□□ -0.72
TPM3-210ENST00000368530 LAIR1Q6GTX8 287 aa10.55□□□□□ -0.72
TPM3-210ENST00000368530 ALKBH5Q6P6C2 394 aaKnown RBP10.55□□□□□ -0.72
TPM3-210ENST00000368530 TXNDC11Q6PKC3 985 aa10.55□□□□□ -0.72
TPM3-210ENST00000368530 ELMOD1Q8N336 334 aa10.55□□□□□ -0.72
TPM3-210ENST00000368530 TXLNBQ8N3L3 684 aa10.55□□□□□ -0.72
TPM3-210ENST00000368530 SPEM1Q8N4L4 309 aa10.55□□□□□ -0.72
TPM3-210ENST00000368530 TTC9BQ8N6N2 239 aa10.55□□□□□ -0.72
TPM3-210ENST00000368530 ARID3AQ99856 593 aa10.55□□□□□ -0.72
TPM3-210ENST00000368530 RTKNQ9BST9 563 aa10.55□□□□□ -0.72
TPM3-210ENST00000368530 CARD6Q9BX69 1037 aa10.55□□□□□ -0.72
TPM3-210ENST00000368530 MTMR12Q9C0I1 747 aa10.55□□□□□ -0.72
TPM3-210ENST00000368530 ASAH2Q9NR71 780 aa10.55□□□□□ -0.72
TPM3-210ENST00000368530 RBM12Q9NTZ6 932 aaKnown RBP10.55□□□□□ -0.72
TPM3-210ENST00000368530 NAGPAQ9UK23 515 aa10.55□□□□□ -0.72
TPM3-210ENST00000368530 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.55□□□□□ -0.72
TPM3-210ENST00000368530 CAPN6Q9Y6Q1 641 aa10.55□□□□□ -0.72
TPM3-210ENST00000368530 A0A1W2PRU2 124 aa10.54□□□□□ -0.72
TPM3-210ENST00000368530 MYBPHLA2RUH7 354 aa10.54□□□□□ -0.72
TPM3-210ENST00000368530 PPEF2O14830 753 aa10.54□□□□□ -0.72
TPM3-210ENST00000368530 TACC1O75410 805 aa10.54□□□□□ -0.72
TPM3-210ENST00000368530 KRT37O76014 449 aa10.54□□□□□ -0.72
TPM3-210ENST00000368530 CALCAP01258 141 aa10.54□□□□□ -0.72
TPM3-210ENST00000368530 RETP07949 1114 aa10.54□□□□□ -0.72
TPM3-210ENST00000368530 CLTAP09496 248 aa10.54□□□□□ -0.72
TPM3-210ENST00000368530 SOX9P48436 509 aa10.54□□□□□ -0.72
TPM3-210ENST00000368530 GUCY2FP51841 1108 aa10.54□□□□□ -0.72
TPM3-210ENST00000368530 TFAMQ00059 246 aaKnown RBP10.54□□□□□ -0.72
TPM3-210ENST00000368530 YWHAHQ04917 246 aaPredicted RBP10.54□□□□□ -0.72
TPM3-210ENST00000368530 WDR49Q8IV35 697 aa10.54□□□□□ -0.72
TPM3-210ENST00000368530 FMNL3Q8IVF7 1028 aa10.54□□□□□ -0.72
TPM3-210ENST00000368530 ARID3BQ8IVW6 561 aaPredicted RBP10.54□□□□□ -0.72
TPM3-210ENST00000368530 MNS1Q8NEH6 495 aa10.54□□□□□ -0.72
TPM3-210ENST00000368530 OLIG1Q8TAK6 271 aa10.54□□□□□ -0.72
TPM3-210ENST00000368530 E2F7Q96AV8 911 aa10.54□□□□□ -0.72
TPM3-210ENST00000368530 PGLYRP2Q96PD5 576 aa10.54□□□□□ -0.72
TPM3-210ENST00000368530 TMEM209Q96SK2 561 aa10.54□□□□□ -0.72
TPM3-210ENST00000368530 AGPAT1Q99943 283 aa10.54□□□□□ -0.72
TPM3-210ENST00000368530 OXCT2Q9BYC2 517 aaPredicted RBP10.54□□□□□ -0.72
TPM3-210ENST00000368530 RPF1Q9H9Y2 349 aaKnown RBP10.54□□□□□ -0.72
TPM3-210ENST00000368530 APOBEC3GQ9HC16 384 aaKnown RBP10.54□□□□□ -0.72
TPM3-210ENST00000368530 ACP6Q9NPH0 428 aa10.54□□□□□ -0.72
TPM3-210ENST00000368530 CDV3Q9UKY7 258 aaKnown RBP10.54□□□□□ -0.72
TPM3-210ENST00000368530 USP18Q9UMW8 372 aa10.54□□□□□ -0.72
TPM3-210ENST00000368530 SLC27A5Q9Y2P5 690 aa10.54□□□□□ -0.72
TPM3-210ENST00000368530 MRFAP1Q9Y605 127 aa10.54□□□□□ -0.72
TPM3-210ENST00000368530 TICRRQ7Z2Z1 1910 aa10.54□□□□□ -0.72
TPM3-210ENST00000368530 MTMR11A4FU01 709 aa10.53□□□□□ -0.72
TPM3-210ENST00000368530 LACTBL1A8MY62 500 aa10.53□□□□□ -0.72
TPM3-210ENST00000368530 CHURC1-FNTBB4DL54 471 aa10.53□□□□□ -0.72
TPM3-210ENST00000368530 LRP3O75074 770 aa10.53□□□□□ -0.72
TPM3-210ENST00000368530 H2AFZP0C0S5 128 aa10.53□□□□□ -0.72
TPM3-210ENST00000368530 TMEM191BP0C7N4 346 aa10.53□□□□□ -0.72
TPM3-210ENST00000368530 ANXA13P27216 316 aa10.53□□□□□ -0.72
TPM3-210ENST00000368530 FNTBP49356 437 aa10.53□□□□□ -0.72
TPM3-210ENST00000368530 SRSF5Q13243 272 aaKnown RBP10.53□□□□□ -0.72
TPM3-210ENST00000368530 NCOA4Q13772 614 aa10.53□□□□□ -0.72
TPM3-210ENST00000368530 CCINQ13939 588 aa10.53□□□□□ -0.72
TPM3-210ENST00000368530 TMEM92Q6UXU6 159 aa10.53□□□□□ -0.72
TPM3-210ENST00000368530 Q6ZS52 159 aa10.53□□□□□ -0.72
TPM3-210ENST00000368530 H2AFVQ71UI9 128 aa10.53□□□□□ -0.72
TPM3-210ENST00000368530 DNAJB7Q7Z6W7 309 aaPredicted RBP10.53□□□□□ -0.72
TPM3-210ENST00000368530 NOP9Q86U38 636 aaKnown RBP10.53□□□□□ -0.72
TPM3-210ENST00000368530 SLC47A2Q86VL8 602 aa10.53□□□□□ -0.72
TPM3-210ENST00000368530 EFCAB13Q8IY85 973 aa10.53□□□□□ -0.72
TPM3-210ENST00000368530 FAM71AQ8IYT1 594 aa10.53□□□□□ -0.72
TPM3-210ENST00000368530 ATAD1Q8NBU5 361 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms