RNA–Protein interactions for RNA: ENST00000368440.4

SMPDL3A-201, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPDL3A, Length 1,851 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-201ENST00000368440 BPIFB1Q8TDL5 484 aa15.86■□□□□ 0.13
SMPDL3A-201ENST00000368440 DEPDC1BQ8WUY9 529 aa15.86■□□□□ 0.13
SMPDL3A-201ENST00000368440 E2F7Q96AV8 911 aa15.86■□□□□ 0.13
SMPDL3A-201ENST00000368440 TRMT61BQ9BVS5 477 aaKnown RBP15.86■□□□□ 0.13
SMPDL3A-201ENST00000368440 SMPD4Q9NXE4 827 aa15.86■□□□□ 0.13
SMPDL3A-201ENST00000368440 OBP2AQ9NY56 170 aa15.86■□□□□ 0.13
SMPDL3A-201ENST00000368440 NUDT5Q9UKK9 219 aa15.86■□□□□ 0.13
SMPDL3A-201ENST00000368440 CA14Q9ULX7 337 aa15.86■□□□□ 0.13
SMPDL3A-201ENST00000368440 CPQQ9Y646 472 aa15.86■□□□□ 0.13
SMPDL3A-201ENST00000368440 AP5Z1O43299 807 aa15.85■□□□□ 0.13
SMPDL3A-201ENST00000368440 TLR5O60602 858 aa15.85■□□□□ 0.13
SMPDL3A-201ENST00000368440 TBX18O95935 607 aa15.85■□□□□ 0.13
SMPDL3A-201ENST00000368440 ZBED1O96006 694 aa15.85■□□□□ 0.13
SMPDL3A-201ENST00000368440 PDGFBP01127 241 aaPredicted RBP15.85■□□□□ 0.13
SMPDL3A-201ENST00000368440 SOX5P35711 763 aa15.85■□□□□ 0.13
SMPDL3A-201ENST00000368440 SLC7A9P82251 487 aa15.85■□□□□ 0.13
SMPDL3A-201ENST00000368440 ZNF77Q15935 545 aa15.85■□□□□ 0.13
SMPDL3A-201ENST00000368440 MEA1Q16626 185 aa15.85■□□□□ 0.13
SMPDL3A-201ENST00000368440 TAF3Q5VWG9 929 aa15.85■□□□□ 0.13
SMPDL3A-201ENST00000368440 SMYD5Q6GMV2 418 aa15.85■□□□□ 0.13
SMPDL3A-201ENST00000368440 PM20D1Q6GTS8 502 aa15.85■□□□□ 0.13
SMPDL3A-201ENST00000368440 WDTC1Q8N5D0 677 aa15.85■□□□□ 0.13
SMPDL3A-201ENST00000368440 SH3RF2Q8TEC5 729 aa15.85■□□□□ 0.13
SMPDL3A-201ENST00000368440 CLEC4CQ8WTT0 213 aa15.85■□□□□ 0.13
SMPDL3A-201ENST00000368440 DDX1Q92499 740 aaKnown RBP15.85■□□□□ 0.13
SMPDL3A-201ENST00000368440 ZFRQ96KR1 1074 aaKnown RBP15.85■□□□□ 0.13
SMPDL3A-201ENST00000368440 SPAG5Q96R06 1193 aa15.85■□□□□ 0.13
SMPDL3A-201ENST00000368440 BRD9Q9H8M2 597 aa15.85■□□□□ 0.13
SMPDL3A-201ENST00000368440 KIF9Q9HAQ2 790 aa15.85■□□□□ 0.13
SMPDL3A-201ENST00000368440 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.85■□□□□ 0.13
SMPDL3A-201ENST00000368440 TJP2Q9UDY2 1190 aa15.85■□□□□ 0.13
SMPDL3A-201ENST00000368440 NAGPAQ9UK23 515 aa15.85■□□□□ 0.13
SMPDL3A-201ENST00000368440 PCDHGC3Q9UN70 934 aa15.85■□□□□ 0.13
SMPDL3A-201ENST00000368440 ARHGAP26Q9UNA1 814 aa15.85■□□□□ 0.13
SMPDL3A-201ENST00000368440 FAM170AA1A519 330 aa15.84■□□□□ 0.13
SMPDL3A-201ENST00000368440 KRBA1A5PL33 1030 aa15.84■□□□□ 0.13
SMPDL3A-201ENST00000368440 TMEM221A6NGB7 291 aa15.84■□□□□ 0.13
SMPDL3A-201ENST00000368440 M0R296 226 aa15.84■□□□□ 0.13
SMPDL3A-201ENST00000368440 ARNTLO00327 626 aa15.84■□□□□ 0.13
SMPDL3A-201ENST00000368440 MDM4O15151 490 aa15.84■□□□□ 0.13
SMPDL3A-201ENST00000368440 MBL2P11226 248 aaPredicted RBP15.84■□□□□ 0.13
SMPDL3A-201ENST00000368440 RARGP13631 454 aa15.84■□□□□ 0.13
SMPDL3A-201ENST00000368440 PFKLP17858 780 aa15.84■□□□□ 0.13
SMPDL3A-201ENST00000368440 TUBP50607 506 aa15.84■□□□□ 0.13
SMPDL3A-201ENST00000368440 UBASH3AP57075 661 aa15.84■□□□□ 0.13
SMPDL3A-201ENST00000368440 SIX6OS1Q8N1H7 587 aa15.84■□□□□ 0.13
SMPDL3A-201ENST00000368440 EPS8L1Q8TE68 723 aa15.84■□□□□ 0.13
SMPDL3A-201ENST00000368440 SLC20A1Q8WUM9 679 aa15.84■□□□□ 0.13
SMPDL3A-201ENST00000368440 CYLDQ9NQC7 956 aa15.84■□□□□ 0.13
SMPDL3A-201ENST00000368440 ST7Q9NRC1 585 aa15.84■□□□□ 0.13
SMPDL3A-201ENST00000368440 IFNKQ9P0W0 207 aa15.84■□□□□ 0.13
SMPDL3A-201ENST00000368440 DAAM1Q9Y4D1 1078 aa15.84■□□□□ 0.13
SMPDL3A-201ENST00000368440 A0A1W2PQC6 194 aa15.84■□□□□ 0.13
SMPDL3A-201ENST00000368440 YJEFN3A6XGL0 299 aa15.84■□□□□ 0.13
SMPDL3A-201ENST00000368440 E7ENQ6 273 aa15.84■□□□□ 0.13
SMPDL3A-201ENST00000368440 SCAMP3O14828 347 aaKnown RBP15.84■□□□□ 0.13
SMPDL3A-201ENST00000368440 RPL34P49207 117 aaKnown RBP15.84■□□□□ 0.13
SMPDL3A-201ENST00000368440 PDE6CP51160 858 aa15.84■□□□□ 0.13
SMPDL3A-201ENST00000368440 DAOAP59103 153 aa15.84■□□□□ 0.13
SMPDL3A-201ENST00000368440 BPIFB4P59827 614 aa15.84■□□□□ 0.13
SMPDL3A-201ENST00000368440 YWHAGP61981 247 aaKnown RBP eCLIP15.84■□□□□ 0.13
SMPDL3A-201ENST00000368440 HFE2Q6ZVN8 426 aa15.84■□□□□ 0.13
SMPDL3A-201ENST00000368440 YAF2Q8IY57 180 aa15.84■□□□□ 0.13
SMPDL3A-201ENST00000368440 C1orf131Q8NDD1 294 aaKnown RBP15.84■□□□□ 0.13
SMPDL3A-201ENST00000368440 WBP2Q969T9 261 aa15.84■□□□□ 0.13
SMPDL3A-201ENST00000368440 HSFY1Q96LI6 401 aa15.84■□□□□ 0.13
SMPDL3A-201ENST00000368440 MIS12Q9H081 205 aa15.84■□□□□ 0.13
SMPDL3A-201ENST00000368440 FBXL21Q9UKT6 434 aa15.84■□□□□ 0.13
SMPDL3A-201ENST00000368440 LEFTY2O00292 366 aa15.83■□□□□ 0.12
SMPDL3A-201ENST00000368440 ZNF263O14978 683 aa15.83■□□□□ 0.12
SMPDL3A-201ENST00000368440 CHADO15335 359 aa15.83■□□□□ 0.12
SMPDL3A-201ENST00000368440 ADCY5O95622 1261 aa15.83■□□□□ 0.12
SMPDL3A-201ENST00000368440 KRT9P35527 623 aa15.83■□□□□ 0.12
SMPDL3A-201ENST00000368440 PBX1P40424 430 aa15.83■□□□□ 0.12
SMPDL3A-201ENST00000368440 STAT1P42224 750 aa15.83■□□□□ 0.12
SMPDL3A-201ENST00000368440 PDCLQ13371 301 aa15.83■□□□□ 0.12
SMPDL3A-201ENST00000368440 MTF1Q14872 753 aa15.83■□□□□ 0.12
SMPDL3A-201ENST00000368440 TRIM68Q6AZZ1 485 aa15.83■□□□□ 0.12
SMPDL3A-201ENST00000368440 SIX5Q8N196 739 aa15.83■□□□□ 0.12
SMPDL3A-201ENST00000368440 BAP1Q92560 729 aa15.83■□□□□ 0.12
SMPDL3A-201ENST00000368440 SLC4A5Q9BY07 1137 aa15.83■□□□□ 0.12
SMPDL3A-201ENST00000368440 CNGB3Q9NQW8 809 aa15.83■□□□□ 0.12
SMPDL3A-201ENST00000368440 GKN1Q9NS71 199 aa15.83■□□□□ 0.12
SMPDL3A-201ENST00000368440 WNT16Q9UBV4 365 aa15.83■□□□□ 0.12
SMPDL3A-201ENST00000368440 NOCTQ9UK39 431 aaKnown RBP15.83■□□□□ 0.12
SMPDL3A-201ENST00000368440 E5RJQ4 531 aa15.82■□□□□ 0.12
SMPDL3A-201ENST00000368440 MMEP08473 750 aa15.82■□□□□ 0.12
SMPDL3A-201ENST00000368440 PSEN1P49768 467 aa15.82■□□□□ 0.12
SMPDL3A-201ENST00000368440 TNK2Q07912 1038 aa15.82■□□□□ 0.12
SMPDL3A-201ENST00000368440 CACNA2D4Q7Z3S7 1137 aa15.82■□□□□ 0.12
SMPDL3A-201ENST00000368440 SCUBE3Q8IX30 993 aa15.82■□□□□ 0.12
SMPDL3A-201ENST00000368440 TTC8Q8TAM2 541 aa15.82■□□□□ 0.12
SMPDL3A-201ENST00000368440 CPXM1Q96SM3 734 aa15.82■□□□□ 0.12
SMPDL3A-201ENST00000368440 TTYH3Q9C0H2 523 aa15.82■□□□□ 0.12
SMPDL3A-201ENST00000368440 LHX5Q9H2C1 402 aa15.82■□□□□ 0.12
SMPDL3A-201ENST00000368440 HEBP1Q9NRV9 189 aa15.82■□□□□ 0.12
SMPDL3A-201ENST00000368440 CLIC5Q9NZA1 410 aa15.82■□□□□ 0.12
SMPDL3A-201ENST00000368440 WNT6Q9Y6F9 365 aa15.82■□□□□ 0.12
SMPDL3A-201ENST00000368440 TCF3P15923 654 aa15.82■□□□□ 0.12
SMPDL3A-201ENST00000368440 ARID5AQ03989 594 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms