RNA–Protein interactions for RNA: ENST00000368439.5

CKS1B-203, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best) BASIC

Gene CKS1B, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-203ENST00000368439 ADGRG2Q8IZP9 1017 aa19.98■□□□□ 0.79
CKS1B-203ENST00000368439 WBP2Q969T9 261 aa19.98■□□□□ 0.79
CKS1B-203ENST00000368439 CNOT6LQ96LI5 555 aaKnown RBP19.98■□□□□ 0.79
CKS1B-203ENST00000368439 TSPAN16Q9UKR8 245 aa19.98■□□□□ 0.79
CKS1B-203ENST00000368439 R4GN57 208 aa19.98■□□□□ 0.79
CKS1B-203ENST00000368439 A0A1W2PQH9 124 aa19.97■□□□□ 0.79
CKS1B-203ENST00000368439 E2F8A0AVK6 867 aa19.97■□□□□ 0.79
CKS1B-203ENST00000368439 PRR23AA6NEV1 266 aa19.97■□□□□ 0.79
CKS1B-203ENST00000368439 TULP2O00295 520 aa19.97■□□□□ 0.79
CKS1B-203ENST00000368439 O00370 1275 aa19.97■□□□□ 0.79
CKS1B-203ENST00000368439 SCAMP3O14828 347 aaKnown RBP19.97■□□□□ 0.79
CKS1B-203ENST00000368439 TBX18O95935 607 aa19.97■□□□□ 0.79
CKS1B-203ENST00000368439 VDRP11473 427 aa19.97■□□□□ 0.79
CKS1B-203ENST00000368439 GCNT1Q02742 428 aa19.97■□□□□ 0.79
CKS1B-203ENST00000368439 GOLGA7BQ2TAP0 167 aa19.97■□□□□ 0.79
CKS1B-203ENST00000368439 PKDCCQ504Y2 493 aa19.97■□□□□ 0.79
CKS1B-203ENST00000368439 SGO2Q562F6 1265 aa19.97■□□□□ 0.79
CKS1B-203ENST00000368439 RRAGAQ7L523 313 aa19.97■□□□□ 0.79
CKS1B-203ENST00000368439 PIGZQ86VD9 579 aa19.97■□□□□ 0.79
CKS1B-203ENST00000368439 PPM1KQ8N3J5 372 aa19.97■□□□□ 0.79
CKS1B-203ENST00000368439 SYNPOQ8N3V7 929 aa19.97■□□□□ 0.79
CKS1B-203ENST00000368439 SPEM1Q8N4L4 309 aa19.97■□□□□ 0.79
CKS1B-203ENST00000368439 GPT2Q8TD30 523 aa19.97■□□□□ 0.79
CKS1B-203ENST00000368439 TFAP2BQ92481 460 aa19.97■□□□□ 0.79
CKS1B-203ENST00000368439 EZH1Q92800 747 aaPredicted RBP19.97■□□□□ 0.79
CKS1B-203ENST00000368439 KREMEN1Q96MU8 473 aa19.97■□□□□ 0.79
CKS1B-203ENST00000368439 IPO9Q96P70 1041 aaKnown RBP19.97■□□□□ 0.79
CKS1B-203ENST00000368439 ZSWIM1Q9BR11 485 aa19.97■□□□□ 0.79
CKS1B-203ENST00000368439 KLF16Q9BXK1 252 aaPredicted RBP19.97■□□□□ 0.79
CKS1B-203ENST00000368439 INTS2Q9H0H0 1204 aaKnown RBP19.97■□□□□ 0.79
CKS1B-203ENST00000368439 MTPAPQ9NVV4 582 aaKnown RBP eCLIP19.97■□□□□ 0.79
CKS1B-203ENST00000368439 C2orf42Q9NWW7 574 aa19.97■□□□□ 0.79
CKS1B-203ENST00000368439 GREM1O60565 184 aa19.96■□□□□ 0.79
CKS1B-203ENST00000368439 GFRA3O60609 400 aa19.96■□□□□ 0.79
CKS1B-203ENST00000368439 NFATC1O95644 943 aa19.96■□□□□ 0.79
CKS1B-203ENST00000368439 CYP17A1P05093 508 aa19.96■□□□□ 0.79
CKS1B-203ENST00000368439 PAEPP09466 180 aa19.96■□□□□ 0.79
CKS1B-203ENST00000368439 ZNF132P52740 706 aa19.96■□□□□ 0.79
CKS1B-203ENST00000368439 AMPD2Q01433 879 aa19.96■□□□□ 0.79
CKS1B-203ENST00000368439 SATB1Q01826 763 aa19.96■□□□□ 0.79
CKS1B-203ENST00000368439 PDE4CQ08493 712 aa19.96■□□□□ 0.79
CKS1B-203ENST00000368439 TMEM270Q6UE05 265 aa19.96■□□□□ 0.79
CKS1B-203ENST00000368439 ZNF276Q8N554 614 aa19.96■□□□□ 0.79
CKS1B-203ENST00000368439 ZBTB44Q8NCP5 570 aa19.96■□□□□ 0.79
CKS1B-203ENST00000368439 P2RY13Q9BPV8 354 aa19.96■□□□□ 0.79
CKS1B-203ENST00000368439 KIAA1257Q9ULG3 409 aa19.96■□□□□ 0.79
CKS1B-203ENST00000368439 SLC9A3R1O14745 358 aaPredicted RBP19.95■□□□□ 0.78
CKS1B-203ENST00000368439 PAPSS2O95340 614 aaPredicted RBP19.95■□□□□ 0.78
CKS1B-203ENST00000368439 EGFP01133 1207 aa19.95■□□□□ 0.78
CKS1B-203ENST00000368439 CD19P15391 556 aa19.95■□□□□ 0.78
CKS1B-203ENST00000368439 OPRD1P41143 372 aa19.95■□□□□ 0.78
CKS1B-203ENST00000368439 CCR3P51677 355 aa19.95■□□□□ 0.78
CKS1B-203ENST00000368439 GRSF1Q12849 480 aaKnown RBP eCLIP19.95■□□□□ 0.78
CKS1B-203ENST00000368439 DHCR24Q15392 516 aa19.95■□□□□ 0.78
CKS1B-203ENST00000368439 PKN3Q6P5Z2 889 aa19.95■□□□□ 0.78
CKS1B-203ENST00000368439 KLHDC10Q6PID8 442 aa19.95■□□□□ 0.78
CKS1B-203ENST00000368439 RHBDF2Q6PJF5 856 aa19.95■□□□□ 0.78
CKS1B-203ENST00000368439 BHLHA9Q7RTU4 235 aa19.95■□□□□ 0.78
CKS1B-203ENST00000368439 NKD2Q969F2 451 aaPredicted RBP19.95■□□□□ 0.78
CKS1B-203ENST00000368439 CNTN6Q9UQ52 1028 aa19.95■□□□□ 0.78
CKS1B-203ENST00000368439 PCDHB4Q9Y5E5 795 aa19.95■□□□□ 0.78
CKS1B-203ENST00000368439 RIF1Q5UIP0 2472 aaKnown RBP19.94■□□□□ 0.78
CKS1B-203ENST00000368439 XPO1O14980 1071 aaKnown RBP19.94■□□□□ 0.78
CKS1B-203ENST00000368439 LILRB5O75023 590 aa19.94■□□□□ 0.78
CKS1B-203ENST00000368439 CALCAP01258 141 aa19.94■□□□□ 0.78
CKS1B-203ENST00000368439 RARGP13631 454 aa19.94■□□□□ 0.78
CKS1B-203ENST00000368439 DRD1P21728 446 aa19.94■□□□□ 0.78
CKS1B-203ENST00000368439 ERCC5P28715 1186 aaPredicted RBP19.94■□□□□ 0.78
CKS1B-203ENST00000368439 ATP5C1P36542 298 aaKnown RBP19.94■□□□□ 0.78
CKS1B-203ENST00000368439 CXCL12P48061 93 aa19.94■□□□□ 0.78
CKS1B-203ENST00000368439 PSEN1P49768 467 aa19.94■□□□□ 0.78
CKS1B-203ENST00000368439 BCAT1P54687 386 aa19.94■□□□□ 0.78
CKS1B-203ENST00000368439 BST2Q10589 180 aaKnown RBP19.94■□□□□ 0.78
CKS1B-203ENST00000368439 NR1H3Q13133 447 aa19.94■□□□□ 0.78
CKS1B-203ENST00000368439 PM20D1Q6GTS8 502 aa19.94■□□□□ 0.78
CKS1B-203ENST00000368439 LCLAT1Q6UWP7 414 aa19.94■□□□□ 0.78
CKS1B-203ENST00000368439 RBM43Q6ZSC3 357 aaKnown RBP19.94■□□□□ 0.78
CKS1B-203ENST00000368439 UBA3Q8TBC4 463 aa19.94■□□□□ 0.78
CKS1B-203ENST00000368439 CD101Q93033 1021 aa19.94■□□□□ 0.78
CKS1B-203ENST00000368439 GBP4Q96PP9 640 aa19.94■□□□□ 0.78
CKS1B-203ENST00000368439 THAP9Q9H5L6 903 aa19.94■□□□□ 0.78
CKS1B-203ENST00000368439 ZSCAN32Q9NX65 697 aa19.94■□□□□ 0.78
CKS1B-203ENST00000368439 CLIC5Q9NZA1 410 aa19.94■□□□□ 0.78
CKS1B-203ENST00000368439 TBC1D14Q9P2M4 693 aa19.94■□□□□ 0.78
CKS1B-203ENST00000368439 NUDT5Q9UKK9 219 aa19.94■□□□□ 0.78
CKS1B-203ENST00000368439 K7ESF4 209 aa19.93■□□□□ 0.78
CKS1B-203ENST00000368439 MDM4O15151 490 aa19.93■□□□□ 0.78
CKS1B-203ENST00000368439 HOXC13P31276 330 aa19.93■□□□□ 0.78
CKS1B-203ENST00000368439 PLA2G4AP47712 749 aa19.93■□□□□ 0.78
CKS1B-203ENST00000368439 TKTL1P51854 596 aa19.93■□□□□ 0.78
CKS1B-203ENST00000368439 HTR3DQ70Z44 454 aa19.93■□□□□ 0.78
CKS1B-203ENST00000368439 BBS7Q8IWZ6 715 aa19.93■□□□□ 0.78
CKS1B-203ENST00000368439 RBBP8NLQ8NC74 664 aaPredicted RBP19.93■□□□□ 0.78
CKS1B-203ENST00000368439 OTUB2Q96DC9 234 aa19.93■□□□□ 0.78
CKS1B-203ENST00000368439 FAM126AQ9BYI3 521 aaPredicted RBP19.93■□□□□ 0.78
CKS1B-203ENST00000368439 NACA2Q9H009 215 aa19.93■□□□□ 0.78
CKS1B-203ENST00000368439 SEMA4AQ9H3S1 761 aa19.93■□□□□ 0.78
CKS1B-203ENST00000368439 HESX1Q9UBX0 185 aa19.93■□□□□ 0.78
CKS1B-203ENST00000368439 NAGPAQ9UK23 515 aa19.93■□□□□ 0.78
CKS1B-203ENST00000368439 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms