RNA–Protein interactions for RNA: ENST00000368010.3

PFDN2-201, Transcript of prefoldin subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN2, Length 677 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN2-201ENST00000368010 GBP6Q6ZN66 633 aa25.19■■□□□ 1.62
PFDN2-201ENST00000368010 RBM43Q6ZSC3 357 aaKnown RBP25.19■■□□□ 1.62
PFDN2-201ENST00000368010 CHFRQ96EP1 664 aa25.19■■□□□ 1.62
PFDN2-201ENST00000368010 KREMEN1Q96MU8 473 aa25.19■■□□□ 1.62
PFDN2-201ENST00000368010 CRACR2AQ9BSW2 395 aa25.19■■□□□ 1.62
PFDN2-201ENST00000368010 RBM12Q9NTZ6 932 aaKnown RBP25.19■■□□□ 1.62
PFDN2-201ENST00000368010 OSER1Q9NX31 292 aa25.19■■□□□ 1.62
PFDN2-201ENST00000368010 NAGPAQ9UK23 515 aa25.19■■□□□ 1.62
PFDN2-201ENST00000368010 FBXO4Q9UKT5 387 aa25.19■■□□□ 1.62
PFDN2-201ENST00000368010 SH3BP1Q9Y3L3 701 aa25.19■■□□□ 1.62
PFDN2-201ENST00000368010 MYO16Q9Y6X6 1858 aa25.18■■□□□ 1.62
PFDN2-201ENST00000368010 E2F8A0AVK6 867 aa25.18■■□□□ 1.62
PFDN2-201ENST00000368010 GTPBP10A4D1E9 387 aaKnown RBP25.18■■□□□ 1.62
PFDN2-201ENST00000368010 RNF225M0QZC1 329 aaPredicted RBP25.18■■□□□ 1.62
PFDN2-201ENST00000368010 SP9P0CG40 484 aa25.18■■□□□ 1.62
PFDN2-201ENST00000368010 SETSIPP0DME0 302 aa25.18■■□□□ 1.62
PFDN2-201ENST00000368010 RARGP13631 454 aa25.18■■□□□ 1.62
PFDN2-201ENST00000368010 ATP5C1P36542 298 aaKnown RBP25.18■■□□□ 1.62
PFDN2-201ENST00000368010 NBL1P41271 181 aa25.18■■□□□ 1.62
PFDN2-201ENST00000368010 GRSF1Q12849 480 aaKnown RBP eCLIP25.18■■□□□ 1.62
PFDN2-201ENST00000368010 MAN2A1Q16706 1144 aa25.18■■□□□ 1.62
PFDN2-201ENST00000368010 RAB41Q5JT25 222 aa25.18■■□□□ 1.62
PFDN2-201ENST00000368010 TRIM65Q6PJ69 517 aa25.18■■□□□ 1.62
PFDN2-201ENST00000368010 MAML2Q8IZL2 1156 aaPredicted RBP25.18■■□□□ 1.62
PFDN2-201ENST00000368010 TFAP2BQ92481 460 aa25.18■■□□□ 1.62
PFDN2-201ENST00000368010 FAM81BQ96LP2 452 aa25.18■■□□□ 1.62
PFDN2-201ENST00000368010 LRRC4Q9HBW1 653 aa25.18■■□□□ 1.62
PFDN2-201ENST00000368010 UBE2TQ9NPD8 197 aaPredicted RBP25.18■■□□□ 1.62
PFDN2-201ENST00000368010 MTPAPQ9NVV4 582 aaKnown RBP eCLIP25.18■■□□□ 1.62
PFDN2-201ENST00000368010 CLIC5Q9NZA1 410 aa25.18■■□□□ 1.62
PFDN2-201ENST00000368010 TBC1D14Q9P2M4 693 aa25.18■■□□□ 1.62
PFDN2-201ENST00000368010 TRDMT1O14717 391 aaKnown RBP25.17■■□□□ 1.62
PFDN2-201ENST00000368010 SCAMP3O14828 347 aaKnown RBP25.17■■□□□ 1.62
PFDN2-201ENST00000368010 RALAP11233 206 aa25.17■■□□□ 1.62
PFDN2-201ENST00000368010 TKTL1P51854 596 aa25.17■■□□□ 1.62
PFDN2-201ENST00000368010 ZNF132P52740 706 aa25.17■■□□□ 1.62
PFDN2-201ENST00000368010 CCINQ13939 588 aa25.17■■□□□ 1.62
PFDN2-201ENST00000368010 STILQ15468 1287 aa25.17■■□□□ 1.62
PFDN2-201ENST00000368010 EXOC3L4Q17RC7 722 aa25.17■■□□□ 1.62
PFDN2-201ENST00000368010 TMEM196Q5HYL7 178 aa25.17■■□□□ 1.62
PFDN2-201ENST00000368010 KLHDC10Q6PID8 442 aa25.17■■□□□ 1.62
PFDN2-201ENST00000368010 LCLAT1Q6UWP7 414 aa25.17■■□□□ 1.62
PFDN2-201ENST00000368010 ENOSF1Q7L5Y1 443 aa25.17■■□□□ 1.62
PFDN2-201ENST00000368010 SCD5Q86SK9 330 aa25.17■■□□□ 1.62
PFDN2-201ENST00000368010 TADA2BQ86TJ2 420 aa25.17■■□□□ 1.62
PFDN2-201ENST00000368010 ARHGAP18Q8N392 663 aa25.17■■□□□ 1.62
PFDN2-201ENST00000368010 SYNPOQ8N3V7 929 aa25.17■■□□□ 1.62
PFDN2-201ENST00000368010 UBA3Q8TBC4 463 aa25.17■■□□□ 1.62
PFDN2-201ENST00000368010 P2RY13Q9BPV8 354 aa25.17■■□□□ 1.62
PFDN2-201ENST00000368010 TULP2O00295 520 aa25.16■■□□□ 1.62
PFDN2-201ENST00000368010 TBX18O95935 607 aa25.16■■□□□ 1.62
PFDN2-201ENST00000368010 IRF1P10914 325 aa25.16■■□□□ 1.62
PFDN2-201ENST00000368010 KRT5P13647 590 aa25.16■■□□□ 1.62
PFDN2-201ENST00000368010 BRD2P25440 801 aaKnown RBP25.16■■□□□ 1.62
PFDN2-201ENST00000368010 HOXD11P31277 338 aaPredicted RBP25.16■■□□□ 1.62
PFDN2-201ENST00000368010 PLA2G4AP47712 749 aa25.16■■□□□ 1.62
PFDN2-201ENST00000368010 MRE11P49959 708 aa25.16■■□□□ 1.62
PFDN2-201ENST00000368010 GOLGA8FQ08AF8 430 aa25.16■■□□□ 1.62
PFDN2-201ENST00000368010 GOLGA8DPQ0D2H9 430 aa25.16■■□□□ 1.62
PFDN2-201ENST00000368010 CNGA2Q16280 664 aa25.16■■□□□ 1.62
PFDN2-201ENST00000368010 MAMSTRQ6ZN01 415 aa25.16■■□□□ 1.62
PFDN2-201ENST00000368010 ALYREFQ86V81 257 aaKnown RBP25.16■■□□□ 1.62
PFDN2-201ENST00000368010 CDK5RAP1Q96SZ6 601 aaKnown RBP25.16■■□□□ 1.62
PFDN2-201ENST00000368010 PRMT8Q9NR22 394 aaPredicted RBP25.16■■□□□ 1.62
PFDN2-201ENST00000368010 WDR3Q9UNX4 943 aaKnown RBP eCLIP25.16■■□□□ 1.62
PFDN2-201ENST00000368010 CNTN6Q9UQ52 1028 aa25.16■■□□□ 1.62
PFDN2-201ENST00000368010 PROB1E7EW31 1015 aa25.15■■□□□ 1.62
PFDN2-201ENST00000368010 CYP17A1P05093 508 aa25.15■■□□□ 1.62
PFDN2-201ENST00000368010 PRKCSHP14314 528 aaPredicted RBP25.15■■□□□ 1.62
PFDN2-201ENST00000368010 SLC9A1P19634 815 aa25.15■■□□□ 1.62
PFDN2-201ENST00000368010 CCR3P51677 355 aa25.15■■□□□ 1.62
PFDN2-201ENST00000368010 MFAP3P55082 362 aa25.15■■□□□ 1.62
PFDN2-201ENST00000368010 CSTF1Q05048 431 aaKnown RBP25.15■■□□□ 1.62
PFDN2-201ENST00000368010 PPP2R5DQ14738 602 aa25.15■■□□□ 1.62
PFDN2-201ENST00000368010 ZNF528Q3MIS6 628 aa25.15■■□□□ 1.62
PFDN2-201ENST00000368010 PKDCCQ504Y2 493 aa25.15■■□□□ 1.62
PFDN2-201ENST00000368010 HSP90AA4PQ58FG1 418 aa25.15■■□□□ 1.62
PFDN2-201ENST00000368010 C10orf120Q5SQS8 335 aa25.15■■□□□ 1.62
PFDN2-201ENST00000368010 FSTL4Q6MZW2 842 aa25.15■■□□□ 1.62
PFDN2-201ENST00000368010 SASS6Q6UVJ0 657 aa25.15■■□□□ 1.62
PFDN2-201ENST00000368010 Q6ZS52 159 aa25.15■■□□□ 1.62
PFDN2-201ENST00000368010 ADGRG2Q8IZP9 1017 aa25.15■■□□□ 1.62
PFDN2-201ENST00000368010 ZNF276Q8N554 614 aa25.15■■□□□ 1.62
PFDN2-201ENST00000368010 CD101Q93033 1021 aa25.15■■□□□ 1.62
PFDN2-201ENST00000368010 OTUB2Q96DC9 234 aa25.15■■□□□ 1.62
PFDN2-201ENST00000368010 TUBGCP2Q9BSJ2 902 aa25.15■■□□□ 1.62
PFDN2-201ENST00000368010 ULBP1Q9BZM6 244 aa25.15■■□□□ 1.62
PFDN2-201ENST00000368010 APEX2Q9UBZ4 518 aa25.15■■□□□ 1.62
PFDN2-201ENST00000368010 DNMT3LQ9UJW3 386 aa25.15■■□□□ 1.62
PFDN2-201ENST00000368010 M0QYV0 167 aa25.14■■□□□ 1.62
PFDN2-201ENST00000368010 ZBED1O96006 694 aa25.14■■□□□ 1.62
PFDN2-201ENST00000368010 DRD1P21728 446 aa25.14■■□□□ 1.62
PFDN2-201ENST00000368010 GALK1P51570 392 aa25.14■■□□□ 1.62
PFDN2-201ENST00000368010 GAS6Q14393 721 aa25.14■■□□□ 1.62
PFDN2-201ENST00000368010 DHCR24Q15392 516 aa25.14■■□□□ 1.62
PFDN2-201ENST00000368010 VWA3BQ502W6 1294 aa25.14■■□□□ 1.62
PFDN2-201ENST00000368010 ZC3H14Q6PJT7 736 aaKnown RBP25.14■■□□□ 1.62
PFDN2-201ENST00000368010 SIX6OS1Q8N1H7 587 aa25.14■■□□□ 1.62
PFDN2-201ENST00000368010 SPEM1Q8N4L4 309 aa25.14■■□□□ 1.62
PFDN2-201ENST00000368010 ENOX1Q8TC92 643 aaKnown RBP25.14■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms