RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 ACOT2P49753 483 aa15.65■□□□□ 0.1
VAMP4-202ENST00000367740 RTP5Q14D33 572 aa15.65■□□□□ 0.1
VAMP4-202ENST00000367740 SDE2Q6IQ49 451 aa15.65■□□□□ 0.1
VAMP4-202ENST00000367740 DENND5BQ6ZUT9 1274 aa15.65■□□□□ 0.1
VAMP4-202ENST00000367740 NUDT18Q6ZVK8 323 aa15.65■□□□□ 0.1
VAMP4-202ENST00000367740 DDX42Q86XP3 938 aaKnown RBP eCLIP15.65■□□□□ 0.1
VAMP4-202ENST00000367740 SPACA3Q8IXA5 215 aa15.65■□□□□ 0.1
VAMP4-202ENST00000367740 C4orf32Q8N8J7 132 aa15.65■□□□□ 0.1
VAMP4-202ENST00000367740 WBP1Q96G27 269 aa15.65■□□□□ 0.1
VAMP4-202ENST00000367740 ZFRQ96KR1 1074 aaKnown RBP15.65■□□□□ 0.1
VAMP4-202ENST00000367740 EIF2B4Q9UI10 523 aaKnown RBP15.65■□□□□ 0.1
VAMP4-202ENST00000367740 E2F8A0AVK6 867 aa15.64■□□□□ 0.09
VAMP4-202ENST00000367740 METTL12A8MUP2 240 aa15.64■□□□□ 0.09
VAMP4-202ENST00000367740 TRIM66O15016 1216 aa15.64■□□□□ 0.09
VAMP4-202ENST00000367740 JUPP14923 745 aa15.64■□□□□ 0.09
VAMP4-202ENST00000367740 CSNK1EP49674 416 aaKnown RBP15.64■□□□□ 0.09
VAMP4-202ENST00000367740 CCDC173Q0VFZ6 552 aa15.64■□□□□ 0.09
VAMP4-202ENST00000367740 KIF19Q2TAC6 998 aa15.64■□□□□ 0.09
VAMP4-202ENST00000367740 METTL3Q86U44 580 aaKnown RBP15.64■□□□□ 0.09
VAMP4-202ENST00000367740 OTUB2Q96DC9 234 aa15.64■□□□□ 0.09
VAMP4-202ENST00000367740 NRSN2Q9GZP1 204 aa15.64■□□□□ 0.09
VAMP4-202ENST00000367740 SPHK2Q9NRA0 654 aa15.64■□□□□ 0.09
VAMP4-202ENST00000367740 FTSJ1Q9UET6 329 aa15.64■□□□□ 0.09
VAMP4-202ENST00000367740 SNX11Q9Y5W9 270 aa15.64■□□□□ 0.09
VAMP4-202ENST00000367740 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.63■□□□□ 0.09
VAMP4-202ENST00000367740 PRRT4C9JH25 899 aa15.63■□□□□ 0.09
VAMP4-202ENST00000367740 H0YCG3 227 aa15.63■□□□□ 0.09
VAMP4-202ENST00000367740 PCDHGA12O60330 932 aa15.63■□□□□ 0.09
VAMP4-202ENST00000367740 MBL2P11226 248 aaPredicted RBP15.63■□□□□ 0.09
VAMP4-202ENST00000367740 C6P13671 934 aa15.63■□□□□ 0.09
VAMP4-202ENST00000367740 GRIK1P39086 918 aa15.63■□□□□ 0.09
VAMP4-202ENST00000367740 PNPLA4P41247 253 aa15.63■□□□□ 0.09
VAMP4-202ENST00000367740 IL12RB1P42701 662 aa15.63■□□□□ 0.09
VAMP4-202ENST00000367740 RHDQ02161 417 aa15.63■□□□□ 0.09
VAMP4-202ENST00000367740 LY6DQ14210 128 aa15.63■□□□□ 0.09
VAMP4-202ENST00000367740 SF3A1Q15459 793 aaKnown RBP15.63■□□□□ 0.09
VAMP4-202ENST00000367740 ANO4Q32M45 955 aa15.63■□□□□ 0.09
VAMP4-202ENST00000367740 GRAMD4Q6IC98 578 aa15.63■□□□□ 0.09
VAMP4-202ENST00000367740 FAM171BQ6P995 826 aa15.63■□□□□ 0.09
VAMP4-202ENST00000367740 TMEM25Q86YD3 366 aa15.63■□□□□ 0.09
VAMP4-202ENST00000367740 BBS7Q8IWZ6 715 aa15.63■□□□□ 0.09
VAMP4-202ENST00000367740 TMEM86AQ8N2M4 240 aa15.63■□□□□ 0.09
VAMP4-202ENST00000367740 ENGASEQ8NFI3 743 aa15.63■□□□□ 0.09
VAMP4-202ENST00000367740 FGF11Q92914 225 aa15.63■□□□□ 0.09
VAMP4-202ENST00000367740 MYLPFQ96A32 169 aa15.63■□□□□ 0.09
VAMP4-202ENST00000367740 ARID3AQ99856 593 aa15.63■□□□□ 0.09
VAMP4-202ENST00000367740 MMTAG2Q9BU76 263 aaKnown RBP15.63■□□□□ 0.09
VAMP4-202ENST00000367740 ITM2CQ9NQX7 267 aa15.63■□□□□ 0.09
VAMP4-202ENST00000367740 DNAJC17Q9NVM6 304 aaKnown RBP15.63■□□□□ 0.09
VAMP4-202ENST00000367740 PCDHB6Q9Y5E3 794 aa15.63■□□□□ 0.09
VAMP4-202ENST00000367740 CKAP5Q14008 2032 aa15.63■□□□□ 0.09
VAMP4-202ENST00000367740 NPHP3-ACAD11A0A0J9YXS1 232 aa15.62■□□□□ 0.09
VAMP4-202ENST00000367740 WASH3PC4AMC7 463 aa15.62■□□□□ 0.09
VAMP4-202ENST00000367740 SLC28A2O43868 658 aa15.62■□□□□ 0.09
VAMP4-202ENST00000367740 BRINP1O60477 761 aa15.62■□□□□ 0.09
VAMP4-202ENST00000367740 HUS1O60921 280 aa15.62■□□□□ 0.09
VAMP4-202ENST00000367740 ATP2C2O75185 946 aa15.62■□□□□ 0.09
VAMP4-202ENST00000367740 REC8O95072 547 aa15.62■□□□□ 0.09
VAMP4-202ENST00000367740 ABL1P00519 1130 aa15.62■□□□□ 0.09
VAMP4-202ENST00000367740 POLR2BP30876 1174 aaKnown RBP15.62■□□□□ 0.09
VAMP4-202ENST00000367740 PPP3CCP48454 512 aa15.62■□□□□ 0.09
VAMP4-202ENST00000367740 CCT8P50990 548 aa15.62■□□□□ 0.09
VAMP4-202ENST00000367740 AFF3P51826 1226 aaKnown RBP15.62■□□□□ 0.09
VAMP4-202ENST00000367740 TARDBPQ13148 414 aaKnown RBP eCLIP15.62■□□□□ 0.09
VAMP4-202ENST00000367740 TRIM29Q14134 588 aa15.62■□□□□ 0.09
VAMP4-202ENST00000367740 FUT11Q495W5 492 aa15.62■□□□□ 0.09
VAMP4-202ENST00000367740 TTC38Q5R3I4 469 aa15.62■□□□□ 0.09
VAMP4-202ENST00000367740 SCARA3Q6AZY7 606 aa15.62■□□□□ 0.09
VAMP4-202ENST00000367740 VSTM1Q6UX27 236 aa15.62■□□□□ 0.09
VAMP4-202ENST00000367740 C4orf50Q6ZRC1 276 aa15.62■□□□□ 0.09
VAMP4-202ENST00000367740 ERICH1Q86X53 443 aa15.62■□□□□ 0.09
VAMP4-202ENST00000367740 ADGRF2Q8IZF7 708 aa15.62■□□□□ 0.09
VAMP4-202ENST00000367740 NSUN7Q8NE18 718 aaKnown RBP15.62■□□□□ 0.09
VAMP4-202ENST00000367740 TMEM176AQ96HP8 235 aa15.62■□□□□ 0.09
VAMP4-202ENST00000367740 CEP295NLQ96MC4 621 aa15.62■□□□□ 0.09
VAMP4-202ENST00000367740 MKRN2Q9H000 416 aaKnown RBP15.62■□□□□ 0.09
VAMP4-202ENST00000367740 LARSQ9P2J5 1176 aaKnown RBP15.62■□□□□ 0.09
VAMP4-202ENST00000367740 PCDHGA1Q9Y5H4 931 aa15.62■□□□□ 0.09
VAMP4-202ENST00000367740 NUMA1Q14980 2115 aa15.62■□□□□ 0.09
VAMP4-202ENST00000367740 TISP43B9A030 160 aa15.61■□□□□ 0.09
VAMP4-202ENST00000367740 K7ENM7 598 aa15.61■□□□□ 0.09
VAMP4-202ENST00000367740 GFRA2O00451 464 aa15.61■□□□□ 0.09
VAMP4-202ENST00000367740 KCNK3O14649 394 aa15.61■□□□□ 0.09
VAMP4-202ENST00000367740 GABRDO14764 452 aa15.61■□□□□ 0.09
VAMP4-202ENST00000367740 JAK2O60674 1132 aa15.61■□□□□ 0.09
VAMP4-202ENST00000367740 BDNFP23560 247 aa15.61■□□□□ 0.09
VAMP4-202ENST00000367740 PCSK1P29120 753 aa15.61■□□□□ 0.09
VAMP4-202ENST00000367740 TPMTP51580 245 aa15.61■□□□□ 0.09
VAMP4-202ENST00000367740 PSMC1P62191 440 aaKnown RBP15.61■□□□□ 0.09
VAMP4-202ENST00000367740 NOP14P78316 857 aaKnown RBP15.61■□□□□ 0.09
VAMP4-202ENST00000367740 KCNH2Q12809 1159 aa15.61■□□□□ 0.09
VAMP4-202ENST00000367740 PKDCCQ504Y2 493 aa15.61■□□□□ 0.09
VAMP4-202ENST00000367740 HES3Q5TGS1 186 aa15.61■□□□□ 0.09
VAMP4-202ENST00000367740 KRT79Q5XKE5 535 aa15.61■□□□□ 0.09
VAMP4-202ENST00000367740 USP49Q70CQ1 688 aa15.61■□□□□ 0.09
VAMP4-202ENST00000367740 NECAB1Q8N987 351 aa15.61■□□□□ 0.09
VAMP4-202ENST00000367740 IGSF8Q969P0 613 aa15.61■□□□□ 0.09
VAMP4-202ENST00000367740 WBP2Q969T9 261 aa15.61■□□□□ 0.09
VAMP4-202ENST00000367740 TRIM9Q9C026 710 aa15.61■□□□□ 0.09
VAMP4-202ENST00000367740 MAGEC2Q9UBF1 373 aaPredicted RBP15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms