RNA–Protein interactions for RNA: ENST00000367279.8

PTPN7-202, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN7, Length 3,265 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-202ENST00000367279 MAP7D3Q8IWC1 876 aa12.83□□□□□ -0.36
PTPN7-202ENST00000367279 FBXO41Q8TF61 875 aa12.83□□□□□ -0.36
PTPN7-202ENST00000367279 C12orf42Q96LP6 360 aa12.83□□□□□ -0.36
PTPN7-202ENST00000367279 BTBD10Q9BSF8 475 aa12.83□□□□□ -0.36
PTPN7-202ENST00000367279 BATF3Q9NR55 127 aa12.83□□□□□ -0.36
PTPN7-202ENST00000367279 TSPAN16Q9UKR8 245 aa12.83□□□□□ -0.36
PTPN7-202ENST00000367279 EVPLQ92817 2033 aa12.83□□□□□ -0.36
PTPN7-202ENST00000367279 A0A087WZ62 844 aa12.83□□□□□ -0.36
PTPN7-202ENST00000367279 FCHO1O14526 889 aa12.83□□□□□ -0.36
PTPN7-202ENST00000367279 APOL1O14791 398 aa12.83□□□□□ -0.36
PTPN7-202ENST00000367279 KRT36O76013 467 aa12.83□□□□□ -0.36
PTPN7-202ENST00000367279 WFS1O76024 890 aa12.83□□□□□ -0.36
PTPN7-202ENST00000367279 RPS12P25398 132 aaKnown RBP12.83□□□□□ -0.36
PTPN7-202ENST00000367279 STIP1P31948 543 aaKnown RBP12.83□□□□□ -0.36
PTPN7-202ENST00000367279 CHI3L2Q15782 390 aa12.83□□□□□ -0.36
PTPN7-202ENST00000367279 MAP1SQ66K74 1059 aaPredicted RBP12.83□□□□□ -0.36
PTPN7-202ENST00000367279 SCUBE3Q8IX30 993 aa12.83□□□□□ -0.36
PTPN7-202ENST00000367279 LMNTD2Q8IXW0 634 aa12.83□□□□□ -0.36
PTPN7-202ENST00000367279 CMASQ8NFW8 434 aaPredicted RBP12.83□□□□□ -0.36
PTPN7-202ENST00000367279 MZB1Q8WU39 189 aa12.83□□□□□ -0.36
PTPN7-202ENST00000367279 SLC44A1Q8WWI5 657 aa12.83□□□□□ -0.36
PTPN7-202ENST00000367279 FAM161BQ96MY7 647 aa12.83□□□□□ -0.36
PTPN7-202ENST00000367279 FDXACB1Q9BRP7 624 aaPredicted RBP12.83□□□□□ -0.36
PTPN7-202ENST00000367279 VPS33BQ9H267 617 aa12.83□□□□□ -0.36
PTPN7-202ENST00000367279 H3BRJ5 948 aa12.82□□□□□ -0.36
PTPN7-202ENST00000367279 VTNP04004 478 aa12.82□□□□□ -0.36
PTPN7-202ENST00000367279 IQCF3P0C7M6 154 aa12.82□□□□□ -0.36
PTPN7-202ENST00000367279 ALDH18A1P54886 795 aaKnown RBP12.82□□□□□ -0.36
PTPN7-202ENST00000367279 CDK16Q00536 496 aa12.82□□□□□ -0.36
PTPN7-202ENST00000367279 NOMO1Q15155 1222 aa12.82□□□□□ -0.36
PTPN7-202ENST00000367279 CCDC142Q17RM4 750 aa12.82□□□□□ -0.36
PTPN7-202ENST00000367279 TTC39BQ5VTQ0 682 aaPredicted RBP12.82□□□□□ -0.36
PTPN7-202ENST00000367279 SLC26A11Q86WA9 606 aa12.82□□□□□ -0.36
PTPN7-202ENST00000367279 NUDCD3Q8IVD9 361 aa12.82□□□□□ -0.36
PTPN7-202ENST00000367279 MAB21L3Q8N8X9 362 aa12.82□□□□□ -0.36
PTPN7-202ENST00000367279 FAM172AQ8WUF8 416 aa12.82□□□□□ -0.36
PTPN7-202ENST00000367279 GPR20Q99678 358 aa12.82□□□□□ -0.36
PTPN7-202ENST00000367279 CNPY3Q9BT09 278 aa12.82□□□□□ -0.36
PTPN7-202ENST00000367279 PPP1R12CQ9BZL4 782 aa12.82□□□□□ -0.36
PTPN7-202ENST00000367279 SPATC1LQ9H0A9 340 aa12.82□□□□□ -0.36
PTPN7-202ENST00000367279 KLC2Q9H0B6 622 aa12.82□□□□□ -0.36
PTPN7-202ENST00000367279 CYLDQ9NQC7 956 aa12.82□□□□□ -0.36
PTPN7-202ENST00000367279 EFR3BQ9Y2G0 817 aa12.82□□□□□ -0.36
PTPN7-202ENST00000367279 MTO1Q9Y2Z2 717 aaKnown RBP12.82□□□□□ -0.36
PTPN7-202ENST00000367279 SYNJ2BP-COX16A0A087WUM0 186 aa12.82□□□□□ -0.36
PTPN7-202ENST00000367279 E2F8A0AVK6 867 aa12.82□□□□□ -0.36
PTPN7-202ENST00000367279 E7ESA3 106 aa12.82□□□□□ -0.36
PTPN7-202ENST00000367279 KIF1CO43896 1103 aaKnown RBP12.82□□□□□ -0.36
PTPN7-202ENST00000367279 B4GALT4O60513 344 aa12.82□□□□□ -0.36
PTPN7-202ENST00000367279 LUC7L3O95232 432 aaKnown RBP12.82□□□□□ -0.36
PTPN7-202ENST00000367279 TOP3BO95985 862 aaKnown RBP12.82□□□□□ -0.36
PTPN7-202ENST00000367279 P4HA1P13674 534 aa12.82□□□□□ -0.36
PTPN7-202ENST00000367279 ZNF143P52747 638 aaPredicted RBP12.82□□□□□ -0.36
PTPN7-202ENST00000367279 YWHAZP63104 245 aaKnown RBP12.82□□□□□ -0.36
PTPN7-202ENST00000367279 GRM1Q13255 1194 aa12.82□□□□□ -0.36
PTPN7-202ENST00000367279 RASA2Q15283 850 aa12.82□□□□□ -0.36
PTPN7-202ENST00000367279 AMHR2Q16671 573 aa12.82□□□□□ -0.36
PTPN7-202ENST00000367279 GOLGA7BQ2TAP0 167 aa12.82□□□□□ -0.36
PTPN7-202ENST00000367279 TSHZ1Q6ZSZ6 1077 aa12.82□□□□□ -0.36
PTPN7-202ENST00000367279 DNAJC9Q8WXX5 260 aa12.82□□□□□ -0.36
PTPN7-202ENST00000367279 CAMKK2Q96RR4 588 aa12.82□□□□□ -0.36
PTPN7-202ENST00000367279 FRMD8P1Q9BZ68 369 aaPredicted RBP12.82□□□□□ -0.36
PTPN7-202ENST00000367279 NMUR2Q9GZQ4 415 aa12.82□□□□□ -0.36
PTPN7-202ENST00000367279 SAR1AQ9NR31 198 aa12.82□□□□□ -0.36
PTPN7-202ENST00000367279 COX16Q9P0S2 106 aa12.82□□□□□ -0.36
PTPN7-202ENST00000367279 PCNTO95613 3336 aa12.82□□□□□ -0.36
PTPN7-202ENST00000367279 RGPD3A6NKT7 1758 aaPredicted RBP12.82□□□□□ -0.36
PTPN7-202ENST00000367279 RGPD4Q7Z3J3 1758 aa12.82□□□□□ -0.36
PTPN7-202ENST00000367279 B2RBV5 119 aa12.82□□□□□ -0.36
PTPN7-202ENST00000367279 ABLIM1O14639 778 aa12.82□□□□□ -0.36
PTPN7-202ENST00000367279 SNRPAP09012 282 aaKnown RBP12.82□□□□□ -0.36
PTPN7-202ENST00000367279 TXNP10599 105 aaKnown RBP12.82□□□□□ -0.36
PTPN7-202ENST00000367279 PGM1P36871 562 aa12.82□□□□□ -0.36
PTPN7-202ENST00000367279 ABL2P42684 1182 aa12.82□□□□□ -0.36
PTPN7-202ENST00000367279 GPD2P43304 727 aa12.82□□□□□ -0.36
PTPN7-202ENST00000367279 CA9Q16790 459 aa12.82□□□□□ -0.36
PTPN7-202ENST00000367279 WASHC2DQ5SRD0 308 aa12.82□□□□□ -0.36
PTPN7-202ENST00000367279 LGSNQ5TDP6 509 aa12.82□□□□□ -0.36
PTPN7-202ENST00000367279 TRNP1Q6NT89 227 aa12.82□□□□□ -0.36
PTPN7-202ENST00000367279 C4orf50Q6ZRC1 276 aa12.82□□□□□ -0.36
PTPN7-202ENST00000367279 ACOT1Q86TX2 421 aa12.82□□□□□ -0.36
PTPN7-202ENST00000367279 NDUFAF2Q8N183 169 aa12.82□□□□□ -0.36
PTPN7-202ENST00000367279 FNIP1Q8TF40 1166 aa12.82□□□□□ -0.36
PTPN7-202ENST00000367279 OTUD5Q96G74 571 aa12.82□□□□□ -0.36
PTPN7-202ENST00000367279 OXNAD1Q96HP4 312 aaPredicted RBP12.82□□□□□ -0.36
PTPN7-202ENST00000367279 RNF157Q96PX1 679 aa12.82□□□□□ -0.36
PTPN7-202ENST00000367279 DHX35Q9H5Z1 703 aaKnown RBP12.82□□□□□ -0.36
PTPN7-202ENST00000367279 SSU72Q9NP77 194 aaKnown RBP12.82□□□□□ -0.36
PTPN7-202ENST00000367279 PAK5Q9P286 719 aa12.82□□□□□ -0.36
PTPN7-202ENST00000367279 ZNF112Q9UJU3 913 aa12.82□□□□□ -0.36
PTPN7-202ENST00000367279 TEX264Q9Y6I9 313 aa12.82□□□□□ -0.36
PTPN7-202ENST00000367279 CAPN9O14815 690 aa12.81□□□□□ -0.36
PTPN7-202ENST00000367279 GSC2O15499 205 aa12.81□□□□□ -0.36
PTPN7-202ENST00000367279 CILPO75339 1184 aa12.81□□□□□ -0.36
PTPN7-202ENST00000367279 SDC4P31431 198 aa12.81□□□□□ -0.36
PTPN7-202ENST00000367279 THOC5Q13769 683 aaKnown RBP12.81□□□□□ -0.36
PTPN7-202ENST00000367279 CDCA2Q69YH5 1023 aaPredicted RBP12.81□□□□□ -0.36
PTPN7-202ENST00000367279 APOBEC3FQ8IUX4 373 aaKnown RBP12.81□□□□□ -0.36
PTPN7-202ENST00000367279 DEPDC1BQ8WUY9 529 aa12.81□□□□□ -0.36
PTPN7-202ENST00000367279 E2F7Q96AV8 911 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms