RNA–Protein interactions for RNA: ENST00000367196.3

CTSD-202, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 907 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-202ENST00000367196 CNOT6LQ96LI5 555 aaKnown RBP15.69■□□□□ 0.1
CTSD-202ENST00000367196 NT5C1AQ9BXI3 368 aa15.69■□□□□ 0.1
CTSD-202ENST00000367196 SDCBP2Q9H190 292 aa15.69■□□□□ 0.1
CTSD-202ENST00000367196 CSNK1G1Q9HCP0 422 aa15.69■□□□□ 0.1
CTSD-202ENST00000367196 ARHGEF4Q9NR80 690 aa15.69■□□□□ 0.1
CTSD-202ENST00000367196 GMIPQ9P107 970 aa15.69■□□□□ 0.1
CTSD-202ENST00000367196 CHORDC1Q9UHD1 332 aaPredicted RBP15.69■□□□□ 0.1
CTSD-202ENST00000367196 PCDHA5Q9Y5H7 936 aa15.69■□□□□ 0.1
CTSD-202ENST00000367196 TLR5O60602 858 aa15.68■□□□□ 0.1
CTSD-202ENST00000367196 HOXC13P31276 330 aa15.68■□□□□ 0.1
CTSD-202ENST00000367196 GTF2H1P32780 548 aa15.68■□□□□ 0.1
CTSD-202ENST00000367196 MAP3K7CLP57077 242 aa15.68■□□□□ 0.1
CTSD-202ENST00000367196 DPYDQ12882 1025 aa15.68■□□□□ 0.1
CTSD-202ENST00000367196 CRY1Q16526 586 aa15.68■□□□□ 0.1
CTSD-202ENST00000367196 PPM1JQ5JR12 505 aa15.68■□□□□ 0.1
CTSD-202ENST00000367196 PLA2G2CQ5R387 149 aa15.68■□□□□ 0.1
CTSD-202ENST00000367196 KRBA2Q6ZNG9 492 aa15.68■□□□□ 0.1
CTSD-202ENST00000367196 TADA2BQ86TJ2 420 aa15.68■□□□□ 0.1
CTSD-202ENST00000367196 FAXDC2Q96IV6 333 aa15.68■□□□□ 0.1
CTSD-202ENST00000367196 ZFRQ96KR1 1074 aaKnown RBP15.68■□□□□ 0.1
CTSD-202ENST00000367196 SPACA7Q96KW9 195 aa15.68■□□□□ 0.1
CTSD-202ENST00000367196 HNRNPABQ99729 332 aaKnown RBP15.68■□□□□ 0.1
CTSD-202ENST00000367196 SMOQ99835 787 aa15.68■□□□□ 0.1
CTSD-202ENST00000367196 NIF3L1Q9GZT8 377 aa15.68■□□□□ 0.1
CTSD-202ENST00000367196 CCSER2Q9H7U1 834 aa15.68■□□□□ 0.1
CTSD-202ENST00000367196 POLMQ9NP87 494 aaPredicted RBP15.68■□□□□ 0.1
CTSD-202ENST00000367196 FAM49BQ9NUQ9 324 aa15.68■□□□□ 0.1
CTSD-202ENST00000367196 LSM7Q9UK45 103 aaKnown RBP15.68■□□□□ 0.1
CTSD-202ENST00000367196 HOXC11O43248 304 aaPredicted RBP15.67■□□□□ 0.1
CTSD-202ENST00000367196 STX10O60499 249 aa15.67■□□□□ 0.1
CTSD-202ENST00000367196 TNFRSF4P43489 277 aa15.67■□□□□ 0.1
CTSD-202ENST00000367196 ADAM9Q13443 819 aa15.67■□□□□ 0.1
CTSD-202ENST00000367196 BYSLQ13895 437 aaKnown RBP15.67■□□□□ 0.1
CTSD-202ENST00000367196 GAB4Q2WGN9 574 aa15.67■□□□□ 0.1
CTSD-202ENST00000367196 LY6G5CQ5SRR4 150 aa15.67■□□□□ 0.1
CTSD-202ENST00000367196 SPOPLQ6IQ16 392 aa15.67■□□□□ 0.1
CTSD-202ENST00000367196 ANO7Q6IWH7 933 aa15.67■□□□□ 0.1
CTSD-202ENST00000367196 RASSF3Q86WH2 238 aa15.67■□□□□ 0.1
CTSD-202ENST00000367196 KCNV2Q8TDN2 545 aa15.67■□□□□ 0.1
CTSD-202ENST00000367196 WHAMMQ8TF30 809 aa15.67■□□□□ 0.1
CTSD-202ENST00000367196 CYFIP2Q96F07 1278 aa15.67■□□□□ 0.1
CTSD-202ENST00000367196 CDK5RAP1Q96SZ6 601 aaKnown RBP15.67■□□□□ 0.1
CTSD-202ENST00000367196 DUSP15Q9H1R2 295 aaPredicted RBP15.67■□□□□ 0.1
CTSD-202ENST00000367196 FAM124BQ9H5Z6 455 aaPredicted RBP15.67■□□□□ 0.1
CTSD-202ENST00000367196 TMEM8AQ9HCN3 771 aa15.67■□□□□ 0.1
CTSD-202ENST00000367196 CYLDQ9NQC7 956 aa15.67■□□□□ 0.1
CTSD-202ENST00000367196 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.67■□□□□ 0.12e-7■■■■■ 88.1
CTSD-202ENST00000367196 SPHK2Q9NRA0 654 aa15.67■□□□□ 0.1
CTSD-202ENST00000367196 POLR3BQ9NW08 1133 aaPredicted RBP15.67■□□□□ 0.1
CTSD-202ENST00000367196 RMND1Q9NWS8 449 aa15.67■□□□□ 0.1
CTSD-202ENST00000367196 HMGXB4Q9UGU5 601 aa15.67■□□□□ 0.1
CTSD-202ENST00000367196 SCML2Q9UQR0 700 aa15.67■□□□□ 0.1
CTSD-202ENST00000367196 A0A0A0MRY4 1105 aa15.66■□□□□ 0.1
CTSD-202ENST00000367196 SCAMP3O14828 347 aaKnown RBP15.66■□□□□ 0.1
CTSD-202ENST00000367196 GDF9O60383 454 aa15.66■□□□□ 0.1
CTSD-202ENST00000367196 KLF8O95600 359 aaPredicted RBP15.66■□□□□ 0.1
CTSD-202ENST00000367196 ADRB1P08588 477 aa15.66■□□□□ 0.1
CTSD-202ENST00000367196 PRR29P0C7W0 189 aa15.66■□□□□ 0.1
CTSD-202ENST00000367196 ADORA2BP29275 332 aa15.66■□□□□ 0.1
CTSD-202ENST00000367196 ATP5C1P36542 298 aaKnown RBP15.66■□□□□ 0.1
CTSD-202ENST00000367196 GCLMP48507 274 aa15.66■□□□□ 0.1
CTSD-202ENST00000367196 PSEN1P49768 467 aa15.66■□□□□ 0.1
CTSD-202ENST00000367196 CREB5Q02930 508 aa15.66■□□□□ 0.1
CTSD-202ENST00000367196 KDSRQ06136 332 aa15.66■□□□□ 0.1
CTSD-202ENST00000367196 ORC1Q13415 861 aa15.66■□□□□ 0.1
CTSD-202ENST00000367196 SF3A2Q15428 464 aaKnown RBP15.66■□□□□ 0.1
CTSD-202ENST00000367196 EDRF1Q3B7T1 1238 aa15.66■□□□□ 0.1
CTSD-202ENST00000367196 KRT39Q6A163 491 aa15.66■□□□□ 0.1
CTSD-202ENST00000367196 KLHDC10Q6PID8 442 aa15.66■□□□□ 0.1
CTSD-202ENST00000367196 CLEC20AQ6ZU45 233 aa15.66■□□□□ 0.1
CTSD-202ENST00000367196 TTC30AQ86WT1 665 aa15.66■□□□□ 0.1
CTSD-202ENST00000367196 CCDC33Q8N5R6 958 aa15.66■□□□□ 0.1
CTSD-202ENST00000367196 C12orf29Q8N999 325 aa15.66■□□□□ 0.1
CTSD-202ENST00000367196 ZMIZ2Q8NF64 920 aa15.66■□□□□ 0.1
CTSD-202ENST00000367196 MMRN2Q9H8L6 949 aa15.66■□□□□ 0.1
CTSD-202ENST00000367196 BCCIPQ9P287 314 aaKnown RBP eCLIP15.66■□□□□ 0.1
CTSD-202ENST00000367196 DEC1Q9P2X7 70 aa15.66■□□□□ 0.1
CTSD-202ENST00000367196 MYOFQ9NZM1 2061 aa15.66■□□□□ 0.1
CTSD-202ENST00000367196 TBC1D3BA6NDS4 549 aa15.65■□□□□ 0.1
CTSD-202ENST00000367196 CILPO75339 1184 aa15.65■□□□□ 0.1
CTSD-202ENST00000367196 BEST1O76090 585 aa15.65■□□□□ 0.1
CTSD-202ENST00000367196 ZNF202O95125 648 aa15.65■□□□□ 0.1
CTSD-202ENST00000367196 CAVIN2O95810 425 aa15.65■□□□□ 0.1
CTSD-202ENST00000367196 TRIM49P0CI25 452 aa15.65■□□□□ 0.1
CTSD-202ENST00000367196 TRIM49CP0CI26 452 aa15.65■□□□□ 0.1
CTSD-202ENST00000367196 IRF1P10914 325 aa15.65■□□□□ 0.1
CTSD-202ENST00000367196 EPB41P11171 864 aaKnown RBP15.65■□□□□ 0.1
CTSD-202ENST00000367196 TIE1P35590 1138 aa15.65■□□□□ 0.1
CTSD-202ENST00000367196 DPP6P42658 865 aa15.65■□□□□ 0.1
CTSD-202ENST00000367196 SLC6A11P48066 632 aa15.65■□□□□ 0.1
CTSD-202ENST00000367196 SLC8A3P57103 927 aa15.65■□□□□ 0.1
CTSD-202ENST00000367196 CCDC6Q16204 474 aa15.65■□□□□ 0.1
CTSD-202ENST00000367196 ANO4Q32M45 955 aa15.65■□□□□ 0.1
CTSD-202ENST00000367196 C1orf220Q5T0J3 134 aa15.65■□□□□ 0.1
CTSD-202ENST00000367196 PMS2CLQ68D20 193 aa15.65■□□□□ 0.1
CTSD-202ENST00000367196 HTR3DQ70Z44 454 aa15.65■□□□□ 0.1
CTSD-202ENST00000367196 BBS7Q8IWZ6 715 aa15.65■□□□□ 0.1
CTSD-202ENST00000367196 ALLCQ8N6M5 410 aa15.65■□□□□ 0.1
CTSD-202ENST00000367196 IL17RCQ8NAC3 791 aa15.65■□□□□ 0.1
CTSD-202ENST00000367196 TXNDC5Q8NBS9 432 aaKnown RBP15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms