RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 CBWD6Q4V339 395 aa12.19□□□□□ -0.46
CDC42BPA-202ENST00000366764 MDH1BQ5I0G3 518 aa12.19□□□□□ -0.46
CDC42BPA-202ENST00000366764 CBWD3Q5JTY5 395 aa12.19□□□□□ -0.46
CDC42BPA-202ENST00000366764 CBWD5Q5RIA9 395 aa12.19□□□□□ -0.46
CDC42BPA-202ENST00000366764 POP5Q969H6 163 aaKnown RBP12.19□□□□□ -0.46
CDC42BPA-202ENST00000366764 UBR2Q8IWV8 1755 aa12.19□□□□□ -0.46
CDC42BPA-202ENST00000366764 SMIM31A0A1B0GVY4 71 aa12.19□□□□□ -0.46
CDC42BPA-202ENST00000366764 TTKP33981 857 aa12.19□□□□□ -0.46
CDC42BPA-202ENST00000366764 DEFA1P59665 94 aa12.19□□□□□ -0.46
CDC42BPA-202ENST00000366764 DEFA3P59666 94 aa12.19□□□□□ -0.46
CDC42BPA-202ENST00000366764 POLLQ9UGP5 575 aa12.19□□□□□ -0.46
CDC42BPA-202ENST00000366764 PLIN4Q96Q06 1357 aa12.19□□□□□ -0.46
CDC42BPA-202ENST00000366764 POLRMTO00411 1230 aaKnown RBP12.19□□□□□ -0.46
CDC42BPA-202ENST00000366764 NEMP1O14524 444 aa12.19□□□□□ -0.46
CDC42BPA-202ENST00000366764 ARHGEF9O43307 516 aa12.19□□□□□ -0.46
CDC42BPA-202ENST00000366764 ATP9BO43861 1147 aa12.19□□□□□ -0.46
CDC42BPA-202ENST00000366764 ECM2O94769 699 aaPredicted RBP12.19□□□□□ -0.46
CDC42BPA-202ENST00000366764 FAM200BP0CF97 657 aa12.19□□□□□ -0.46
CDC42BPA-202ENST00000366764 VCAM1P19320 739 aa12.19□□□□□ -0.46
CDC42BPA-202ENST00000366764 R3HDM1Q15032 1099 aaKnown RBP12.19□□□□□ -0.46
CDC42BPA-202ENST00000366764 ZNF484Q5JVG2 852 aa12.19□□□□□ -0.46
CDC42BPA-202ENST00000366764 EPHB6O15197 1021 aa12.19□□□□□ -0.46
CDC42BPA-202ENST00000366764 ALBP02768 609 aa12.19□□□□□ -0.46
CDC42BPA-202ENST00000366764 ELK3P41970 407 aa12.19□□□□□ -0.46
CDC42BPA-202ENST00000366764 DNERQ8NFT8 737 aa12.19□□□□□ -0.46
CDC42BPA-202ENST00000366764 SH2D3AQ9BRG2 576 aa12.19□□□□□ -0.46
CDC42BPA-202ENST00000366764 TLR2O60603 784 aa12.18□□□□□ -0.46
CDC42BPA-202ENST00000366764 ARP10275 920 aa12.18□□□□□ -0.46
CDC42BPA-202ENST00000366764 RARBP10826 455 aa12.18□□□□□ -0.46
CDC42BPA-202ENST00000366764 CPNE1Q99829 537 aa12.18□□□□□ -0.46
CDC42BPA-202ENST00000366764 SSU72Q9NP77 194 aaKnown RBP12.18□□□□□ -0.46
CDC42BPA-202ENST00000366764 MROH7Q68CQ1 1323 aa12.18□□□□□ -0.46
CDC42BPA-202ENST00000366764 ATP9AO75110 1047 aa12.18□□□□□ -0.46
CDC42BPA-202ENST00000366764 SSTR3P32745 418 aaPredicted RBP12.18□□□□□ -0.46
CDC42BPA-202ENST00000366764 CPA2P48052 419 aa12.18□□□□□ -0.46
CDC42BPA-202ENST00000366764 TBL3Q12788 808 aaKnown RBP12.18□□□□□ -0.46
CDC42BPA-202ENST00000366764 MMTAG2Q9BU76 263 aaKnown RBP12.18□□□□□ -0.46
CDC42BPA-202ENST00000366764 MED1Q15648 1581 aaPredicted RBP12.18□□□□□ -0.46
CDC42BPA-202ENST00000366764 HADHBP55084 474 aaKnown RBP12.18□□□□□ -0.46
CDC42BPA-202ENST00000366764 GTF2BQ00403 316 aa12.18□□□□□ -0.46
CDC42BPA-202ENST00000366764 PTK2BQ14289 1009 aa12.18□□□□□ -0.46
CDC42BPA-202ENST00000366764 DCAF6Q58WW2 860 aa12.18□□□□□ -0.46
CDC42BPA-202ENST00000366764 ZBTB10Q96DT7 871 aa12.18□□□□□ -0.46
CDC42BPA-202ENST00000366764 SLC4A7Q9Y6M7 1214 aa12.18□□□□□ -0.46
CDC42BPA-202ENST00000366764 FAM58BPP0C7Q3 252 aa12.18□□□□□ -0.46
CDC42BPA-202ENST00000366764 KCNK10P57789 538 aa12.18□□□□□ -0.46
CDC42BPA-202ENST00000366764 CAPRIN1Q14444 709 aaKnown RBP12.18□□□□□ -0.46
CDC42BPA-202ENST00000366764 KIAA1841Q6NSI8 718 aa12.18□□□□□ -0.46
CDC42BPA-202ENST00000366764 MAGED4Q96JG8 741 aa12.18□□□□□ -0.46
CDC42BPA-202ENST00000366764 KDM1AO60341 852 aa12.18□□□□□ -0.46
CDC42BPA-202ENST00000366764 KCNA2P16389 499 aa12.18□□□□□ -0.46
CDC42BPA-202ENST00000366764 PGAM1P18669 254 aa12.18□□□□□ -0.46
CDC42BPA-202ENST00000366764 ROR2Q01974 943 aaKnown RBP12.18□□□□□ -0.46
CDC42BPA-202ENST00000366764 MKRN4PQ13434 485 aaPredicted RBP12.18□□□□□ -0.46
CDC42BPA-202ENST00000366764 ACVR2BQ13705 512 aa12.18□□□□□ -0.46
CDC42BPA-202ENST00000366764 CDR2LQ86X02 465 aaPredicted RBP12.18□□□□□ -0.46
CDC42BPA-202ENST00000366764 AGR3Q8TD06 166 aa12.18□□□□□ -0.46
CDC42BPA-202ENST00000366764 ADNPQ9H2P0 1102 aa12.18□□□□□ -0.46
CDC42BPA-202ENST00000366764 CPA3P15088 417 aa12.18□□□□□ -0.46
CDC42BPA-202ENST00000366764 BGNP21810 368 aa12.18□□□□□ -0.46
CDC42BPA-202ENST00000366764 PTDSS1P48651 473 aaKnown RBP12.18□□□□□ -0.46
CDC42BPA-202ENST00000366764 MAMLD1Q13495 774 aa12.18□□□□□ -0.46
CDC42BPA-202ENST00000366764 URGCPQ8TCY9 931 aa12.18□□□□□ -0.46
CDC42BPA-202ENST00000366764 SH3GL1Q99961 368 aa12.18□□□□□ -0.46
CDC42BPA-202ENST00000366764 BARX2Q9UMQ3 279 aaPredicted RBP12.18□□□□□ -0.46
CDC42BPA-202ENST00000366764 CLASP2O75122 1294 aaKnown RBP12.18□□□□□ -0.46
CDC42BPA-202ENST00000366764 RNF135Q8IUD6 432 aa12.18□□□□□ -0.46
CDC42BPA-202ENST00000366764 ELMO2Q96JJ3 720 aa12.18□□□□□ -0.46
CDC42BPA-202ENST00000366764 APPL1Q9UKG1 709 aa12.18□□□□□ -0.46
CDC42BPA-202ENST00000366764 A0A0U1RQJ8 604 aa12.18□□□□□ -0.46
CDC42BPA-202ENST00000366764 PSMG1O95456 288 aa12.18□□□□□ -0.46
CDC42BPA-202ENST00000366764 GH1P01241 217 aa12.18□□□□□ -0.46
CDC42BPA-202ENST00000366764 KCNK18Q7Z418 384 aa12.18□□□□□ -0.46
CDC42BPA-202ENST00000366764 ALLCQ8N6M5 410 aa12.18□□□□□ -0.46
CDC42BPA-202ENST00000366764 AGAP11Q8TF27 550 aa12.18□□□□□ -0.46
CDC42BPA-202ENST00000366764 KIAA1683Q9H0B3 1180 aa12.18□□□□□ -0.46
CDC42BPA-202ENST00000366764 FSCN2O14926 492 aa12.17□□□□□ -0.46
CDC42BPA-202ENST00000366764 GRAP2O75791 330 aa12.17□□□□□ -0.46
CDC42BPA-202ENST00000366764 ACAT1P24752 427 aaKnown RBP12.17□□□□□ -0.46
CDC42BPA-202ENST00000366764 NFIAQ12857 509 aa12.17□□□□□ -0.46
CDC42BPA-202ENST00000366764 PTP4A2Q12974 167 aa12.17□□□□□ -0.46
CDC42BPA-202ENST00000366764 BRSK2Q8IWQ3 736 aa12.17□□□□□ -0.46
CDC42BPA-202ENST00000366764 SLITRK1Q96PX8 696 aa12.17□□□□□ -0.46
CDC42BPA-202ENST00000366764 TUBGCP4Q9UGJ1 667 aa12.17□□□□□ -0.46
CDC42BPA-202ENST00000366764 M0R3G1 203 aa12.17□□□□□ -0.46
CDC42BPA-202ENST00000366764 SUPT3HO75486 399 aa12.17□□□□□ -0.46
CDC42BPA-202ENST00000366764 SLC4A1P02730 911 aa12.17□□□□□ -0.46
CDC42BPA-202ENST00000366764 GP5P40197 560 aa12.17□□□□□ -0.46
CDC42BPA-202ENST00000366764 RBBP7Q16576 425 aa12.17□□□□□ -0.46
CDC42BPA-202ENST00000366764 PRPF18Q99633 342 aaKnown RBP12.17□□□□□ -0.46
CDC42BPA-202ENST00000366764 HSD17B14Q9BPX1 270 aa12.17□□□□□ -0.46
CDC42BPA-202ENST00000366764 DDHD1Q8NEL9 900 aa12.17□□□□□ -0.46
CDC42BPA-202ENST00000366764 BEGAINQ9BUH8 593 aa12.17□□□□□ -0.46
CDC42BPA-202ENST00000366764 EIF4E1BA6NMX2 242 aaKnown RBP12.17□□□□□ -0.46
CDC42BPA-202ENST00000366764 RGS4P49798 205 aa12.17□□□□□ -0.46
CDC42BPA-202ENST00000366764 PDAP1Q13442 181 aaKnown RBP12.17□□□□□ -0.46
CDC42BPA-202ENST00000366764 AARS2Q5JTZ9 985 aaKnown RBP12.17□□□□□ -0.46
CDC42BPA-202ENST00000366764 SCARA3Q6AZY7 606 aa12.17□□□□□ -0.46
CDC42BPA-202ENST00000366764 PHF13Q86YI8 300 aaPredicted RBP12.17□□□□□ -0.46
CDC42BPA-202ENST00000366764 PRKD2Q9BZL6 878 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms