RNA–Protein interactions for RNA: ENST00000365563.1

RNU6-54P-201, Transcript of RNA, U6 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU6-54P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-54P-201ENST00000365563 HNRNPLLQ8WVV9 542 aaKnown RBP0.37□□□□□ -2.35
RNU6-54P-201ENST00000365563 SOCS4Q8WXH5 440 aa0.37□□□□□ -2.35
RNU6-54P-201ENST00000365563 ATG4AQ8WYN0 398 aa0.37□□□□□ -2.35
RNU6-54P-201ENST00000365563 CENPIQ92674 756 aaPredicted RBP0.37□□□□□ -2.35
RNU6-54P-201ENST00000365563 TRMT61AQ96FX7 289 aaKnown RBP0.37□□□□□ -2.35
RNU6-54P-201ENST00000365563 ELOVL1Q9BW60 279 aa0.37□□□□□ -2.35
RNU6-54P-201ENST00000365563 PRDM12Q9H4Q4 367 aa0.37□□□□□ -2.35
RNU6-54P-201ENST00000365563 CCSER2Q9H7U1 834 aa0.37□□□□□ -2.35
RNU6-54P-201ENST00000365563 ZNF696Q9H7X3 374 aa0.37□□□□□ -2.35
RNU6-54P-201ENST00000365563 KRCC1Q9NPI7 259 aaPredicted RBP0.37□□□□□ -2.35
RNU6-54P-201ENST00000365563 DDX43Q9NXZ2 648 aaKnown RBP0.37□□□□□ -2.35
RNU6-54P-201ENST00000365563 AGO2Q9UKV8 859 aaKnown RBP0.37□□□□□ -2.35
RNU6-54P-201ENST00000365563 MED16Q9Y2X0 877 aa0.37□□□□□ -2.35
RNU6-54P-201ENST00000365563 RNF215Q9Y6U7 377 aa0.37□□□□□ -2.35
RNU6-54P-201ENST00000365563 MYBBP1AQ9BQG0 1328 aaKnown RBP0.37□□□□□ -2.35
RNU6-54P-201ENST00000365563 CACNA1FO60840 1977 aa0.36□□□□□ -2.35
RNU6-54P-201ENST00000365563 TRBV5-3A0A0A0MS03 114 aa0.36□□□□□ -2.35
RNU6-54P-201ENST00000365563 IGKV6-21A0A0C4DH24 114 aa0.36□□□□□ -2.35
RNU6-54P-201ENST00000365563 M0R3H8 397 aa0.36□□□□□ -2.35
RNU6-54P-201ENST00000365563 AP4M1O00189 453 aa0.36□□□□□ -2.35
RNU6-54P-201ENST00000365563 PSMD9O00233 223 aa0.36□□□□□ -2.35
RNU6-54P-201ENST00000365563 NEMP1O14524 444 aa0.36□□□□□ -2.35
RNU6-54P-201ENST00000365563 SPRY3O43610 288 aa0.36□□□□□ -2.35
RNU6-54P-201ENST00000365563 PLAUP00749 431 aa0.36□□□□□ -2.35
RNU6-54P-201ENST00000365563 PRB2P02812 416 aaPredicted RBP0.36□□□□□ -2.35
RNU6-54P-201ENST00000365563 KLKB1P03952 638 aa0.36□□□□□ -2.35
RNU6-54P-201ENST00000365563 CYP1A2P05177 515 aa0.36□□□□□ -2.35
RNU6-54P-201ENST00000365563 LPLP06858 475 aa0.36□□□□□ -2.35
RNU6-54P-201ENST00000365563 GNAI3P08754 354 aa0.36□□□□□ -2.35
RNU6-54P-201ENST00000365563 MTHFD2P13995 350 aa0.36□□□□□ -2.35
RNU6-54P-201ENST00000365563 ATP2A2P16615 1042 aaKnown RBP0.36□□□□□ -2.35
RNU6-54P-201ENST00000365563 TFEBP19484 476 aa0.36□□□□□ -2.35
RNU6-54P-201ENST00000365563 CHRM3P20309 590 aa0.36□□□□□ -2.35
RNU6-54P-201ENST00000365563 ALDH4A1P30038 563 aa0.36□□□□□ -2.35
RNU6-54P-201ENST00000365563 PDLIM4P50479 330 aa0.36□□□□□ -2.35
RNU6-54P-201ENST00000365563 NR0B1P51843 470 aaKnown RBP0.36□□□□□ -2.35
RNU6-54P-201ENST00000365563 LUMP51884 338 aaPredicted RBP0.36□□□□□ -2.35
RNU6-54P-201ENST00000365563 KPNA1P52294 538 aaPredicted RBP0.36□□□□□ -2.35
RNU6-54P-201ENST00000365563 COPB1P53618 953 aaKnown RBP0.36□□□□□ -2.35
RNU6-54P-201ENST00000365563 DRG2P55039 364 aaKnown RBP0.36□□□□□ -2.35
RNU6-54P-201ENST00000365563 LOXL3P58215 753 aa0.36□□□□□ -2.35
RNU6-54P-201ENST00000365563 TRA2BP62995 288 aaKnown RBP0.36□□□□□ -2.35
RNU6-54P-201ENST00000365563 GNAI1P63096 354 aa0.36□□□□□ -2.35
RNU6-54P-201ENST00000365563 CDK17Q00537 523 aa0.36□□□□□ -2.35
RNU6-54P-201ENST00000365563 MGAT2Q10469 447 aa0.36□□□□□ -2.35
RNU6-54P-201ENST00000365563 GNL2Q13823 731 aaKnown RBP0.36□□□□□ -2.35
RNU6-54P-201ENST00000365563 HABP2Q14520 560 aaPredicted RBP0.36□□□□□ -2.35
RNU6-54P-201ENST00000365563 ADRM1Q16186 407 aa0.36□□□□□ -2.35
RNU6-54P-201ENST00000365563 ANO4Q32M45 955 aa0.36□□□□□ -2.35
RNU6-54P-201ENST00000365563 ACCSLQ4AC99 568 aa0.36□□□□□ -2.35
RNU6-54P-201ENST00000365563 AWAT1Q58HT5 328 aa0.36□□□□□ -2.35
RNU6-54P-201ENST00000365563 DNTTIP2Q5QJE6 756 aaKnown RBP0.36□□□□□ -2.35
RNU6-54P-201ENST00000365563 NUGGCQ68CJ6 796 aa0.36□□□□□ -2.35
RNU6-54P-201ENST00000365563 TMEM108Q6UXF1 575 aa0.36□□□□□ -2.35
RNU6-54P-201ENST00000365563 C9orf139Q6ZV77 190 aa0.36□□□□□ -2.35
RNU6-54P-201ENST00000365563 Q6ZVH6 145 aa0.36□□□□□ -2.35
RNU6-54P-201ENST00000365563 SPATC1Q76KD6 591 aa0.36□□□□□ -2.35
RNU6-54P-201ENST00000365563 SMIM29Q86T20 159 aa0.36□□□□□ -2.35
RNU6-54P-201ENST00000365563 C11orf74Q86VG3 221 aa0.36□□□□□ -2.35
RNU6-54P-201ENST00000365563 PDSS2Q86YH6 399 aa0.36□□□□□ -2.35
RNU6-54P-201ENST00000365563 FBXL16Q8N461 479 aa0.36□□□□□ -2.35
RNU6-54P-201ENST00000365563 IL17RCQ8NAC3 791 aa0.36□□□□□ -2.35
RNU6-54P-201ENST00000365563 NGDNQ8NEJ9 315 aaKnown RBP0.36□□□□□ -2.35
RNU6-54P-201ENST00000365563 CADM4Q8NFZ8 388 aa0.36□□□□□ -2.35
RNU6-54P-201ENST00000365563 DDX55Q8NHQ9 600 aaKnown RBP eCLIP0.36□□□□□ -2.35
RNU6-54P-201ENST00000365563 FGFBP3Q8TAT2 258 aa0.36□□□□□ -2.35
RNU6-54P-201ENST00000365563 IGFBPL1Q8WX77 278 aa0.36□□□□□ -2.35
RNU6-54P-201ENST00000365563 AUTS2Q8WXX7 1259 aa0.36□□□□□ -2.35
RNU6-54P-201ENST00000365563 FEM1CQ96JP0 617 aa0.36□□□□□ -2.35
RNU6-54P-201ENST00000365563 LINC00167Q96N53 147 aa0.36□□□□□ -2.35
RNU6-54P-201ENST00000365563 BUD13Q9BRD0 619 aaKnown RBP eCLIP0.36□□□□□ -2.35
RNU6-54P-201ENST00000365563 LCE3DQ9BYE3 92 aa0.36□□□□□ -2.35
RNU6-54P-201ENST00000365563 ACE2Q9BYF1 805 aaPredicted RBP0.36□□□□□ -2.35
RNU6-54P-201ENST00000365563 SMOC2Q9H3U7 446 aa0.36□□□□□ -2.35
RNU6-54P-201ENST00000365563 MVB12BQ9H7P6 319 aa0.36□□□□□ -2.35
RNU6-54P-201ENST00000365563 ZNF408Q9H9D4 720 aa0.36□□□□□ -2.35
RNU6-54P-201ENST00000365563 TRIM39Q9HCM9 518 aa0.36□□□□□ -2.35
RNU6-54P-201ENST00000365563 ARL8BQ9NVJ2 186 aa0.36□□□□□ -2.35
RNU6-54P-201ENST00000365563 RLIMQ9NVW2 624 aa0.36□□□□□ -2.35
RNU6-54P-201ENST00000365563 GAR1Q9NY12 217 aaKnown RBP0.36□□□□□ -2.35
RNU6-54P-201ENST00000365563 ETAA1Q9NY74 926 aa0.36□□□□□ -2.35
RNU6-54P-201ENST00000365563 DPP7Q9UHL4 492 aa0.36□□□□□ -2.35
RNU6-54P-201ENST00000365563 SERTAD3Q9UJW9 196 aa0.36□□□□□ -2.35
RNU6-54P-201ENST00000365563 PTGDR2Q9Y5Y4 395 aa0.36□□□□□ -2.35
RNU6-54P-201ENST00000365563 FRMPD2Q68DX3 1309 aaPredicted RBP0.36□□□□□ -2.35
RNU6-54P-201ENST00000365563 COL5A2P05997 1499 aaPredicted RBP0.35□□□□□ -2.35
RNU6-54P-201ENST00000365563 ADAMTS9Q9P2N4 1935 aa0.35□□□□□ -2.35
RNU6-54P-201ENST00000365563 AGRNO00468 2067 aa0.35□□□□□ -2.35
RNU6-54P-201ENST00000365563 A0A0J9YWU9 116 aa0.35□□□□□ -2.35
RNU6-54P-201ENST00000365563 GAGE12JA6NER3 117 aa0.35□□□□□ -2.35
RNU6-54P-201ENST00000365563 E9PLN8 166 aa0.35□□□□□ -2.35
RNU6-54P-201ENST00000365563 CES2O00748 559 aa0.35□□□□□ -2.35
RNU6-54P-201ENST00000365563 MDM4O15151 490 aa0.35□□□□□ -2.35
RNU6-54P-201ENST00000365563 PDPK1O15530 556 aa0.35□□□□□ -2.35
RNU6-54P-201ENST00000365563 FGF17O60258 216 aa0.35□□□□□ -2.35
RNU6-54P-201ENST00000365563 ATG13O75143 517 aa0.35□□□□□ -2.35
RNU6-54P-201ENST00000365563 IFNA2P01563 188 aa0.35□□□□□ -2.35
RNU6-54P-201ENST00000365563 AMY1AP04745 511 aa0.35□□□□□ -2.35
RNU6-54P-201ENST00000365563 WEE2P0C1S8 567 aa0.35□□□□□ -2.35
RNU6-54P-201ENST00000365563 FAM153BP0C7A2 387 aa0.35□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms