RNA–Protein interactions for RNA: ENST00000362700.1

RNU6-228P-201, Transcript of RNA, U6 small nuclear 228, pseudogene, humanhuman

BASIC

Gene RNU6-228P, Length 106 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-228P-201ENST00000362700 IL17FQ96PD4 163 aa0.21□□□□□ -2.38
RNU6-228P-201ENST00000362700 TUBA1CQ9BQE3 449 aa0.21□□□□□ -2.38
RNU6-228P-201ENST00000362700 ELOVL1Q9BW60 279 aa0.21□□□□□ -2.38
RNU6-228P-201ENST00000362700 SMOC2Q9H3U7 446 aa0.21□□□□□ -2.38
RNU6-228P-201ENST00000362700 CHST11Q9NPF2 352 aa0.21□□□□□ -2.38
RNU6-228P-201ENST00000362700 MSRAQ9UJ68 235 aa0.21□□□□□ -2.38
RNU6-228P-201ENST00000362700 FZD10Q9ULW2 581 aa0.21□□□□□ -2.38
RNU6-228P-201ENST00000362700 SSPOA2VEC9 5147 aa0.21□□□□□ -2.38
RNU6-228P-201ENST00000362700 TRBV5-3A0A0A0MS03 114 aa0.2□□□□□ -2.38
RNU6-228P-201ENST00000362700 A0A0G2JK05 382 aa0.2□□□□□ -2.38
RNU6-228P-201ENST00000362700 TCP11X1B4DZS4 312 aa0.2□□□□□ -2.38
RNU6-228P-201ENST00000362700 PCDH17O14917 1159 aa0.2□□□□□ -2.38
RNU6-228P-201ENST00000362700 CRYAAP02489 173 aa0.2□□□□□ -2.38
RNU6-228P-201ENST00000362700 PRKCBP05771 671 aa0.2□□□□□ -2.38
RNU6-228P-201ENST00000362700 GATA2P23769 480 aaPredicted RBP0.2□□□□□ -2.38
RNU6-228P-201ENST00000362700 SLC6A4P31645 630 aa0.2□□□□□ -2.38
RNU6-228P-201ENST00000362700 TUBA1BP68363 451 aa0.2□□□□□ -2.38
RNU6-228P-201ENST00000362700 FAM110CQ1W6H9 321 aa0.2□□□□□ -2.38
RNU6-228P-201ENST00000362700 TCTEX1D4Q5JR98 221 aa0.2□□□□□ -2.38
RNU6-228P-201ENST00000362700 ICE2Q659A1 982 aa0.2□□□□□ -2.38
RNU6-228P-201ENST00000362700 DCDC5Q6ZRR9 648 aa0.2□□□□□ -2.38
RNU6-228P-201ENST00000362700 SLC41A1Q8IVJ1 513 aa0.2□□□□□ -2.38
RNU6-228P-201ENST00000362700 CLIP4Q8N3C7 705 aa0.2□□□□□ -2.38
RNU6-228P-201ENST00000362700 PSD4Q8NDX1 1056 aa0.2□□□□□ -2.38
RNU6-228P-201ENST00000362700 GLG1Q92896 1179 aa0.2□□□□□ -2.38
RNU6-228P-201ENST00000362700 USP13Q92995 863 aaPredicted RBP0.2□□□□□ -2.38
RNU6-228P-201ENST00000362700 WNT8AQ9H1J5 351 aa0.2□□□□□ -2.38
RNU6-228P-201ENST00000362700 ZMAT4Q9H898 229 aa0.2□□□□□ -2.38
RNU6-228P-201ENST00000362700 TXNRD2Q9NNW7 524 aa0.2□□□□□ -2.38
RNU6-228P-201ENST00000362700 PAPOLBQ9NRJ5 636 aaKnown RBP0.2□□□□□ -2.38
RNU6-228P-201ENST00000362700 GABRQQ9UN88 632 aa0.2□□□□□ -2.38
RNU6-228P-201ENST00000362700 KCNK7Q9Y2U2 307 aa0.2□□□□□ -2.38
RNU6-228P-201ENST00000362700 SPO11Q9Y5K1 396 aa0.2□□□□□ -2.38
RNU6-228P-201ENST00000362700 PRPF4O43172 522 aaKnown RBP eCLIP0.19□□□□□ -2.38
RNU6-228P-201ENST00000362700 SPRY3O43610 288 aa0.19□□□□□ -2.38
RNU6-228P-201ENST00000362700 FGF17O60258 216 aa0.19□□□□□ -2.38
RNU6-228P-201ENST00000362700 USP12O75317 370 aa0.19□□□□□ -2.38
RNU6-228P-201ENST00000362700 SORBS2O94875 1100 aaKnown RBP0.19□□□□□ -2.38
RNU6-228P-201ENST00000362700 ZNF12P17014 697 aa0.19□□□□□ -2.38
RNU6-228P-201ENST00000362700 EN2P19622 333 aaPredicted RBP0.19□□□□□ -2.38
RNU6-228P-201ENST00000362700 DGKAP23743 735 aa0.19□□□□□ -2.38
RNU6-228P-201ENST00000362700 COPB1P53618 953 aaKnown RBP0.19□□□□□ -2.38
RNU6-228P-201ENST00000362700 RACK1P63244 317 aaKnown RBP0.19□□□□□ -2.38
RNU6-228P-201ENST00000362700 MRPS5P82675 430 aaKnown RBP0.19□□□□□ -2.38
RNU6-228P-201ENST00000362700 TAGLNQ01995 201 aaKnown RBP0.19□□□□□ -2.38
RNU6-228P-201ENST00000362700 GPS2Q13227 327 aa0.19□□□□□ -2.38
RNU6-228P-201ENST00000362700 HDAC1Q13547 482 aaPredicted RBP0.19□□□□□ -2.38
RNU6-228P-201ENST00000362700 SFRP4Q6FHJ7 346 aaPredicted RBP0.19□□□□□ -2.38
RNU6-228P-201ENST00000362700 SWSAP1Q6NVH7 229 aa0.19□□□□□ -2.38
RNU6-228P-201ENST00000362700 METTL7BQ6UX53 244 aa0.19□□□□□ -2.38
RNU6-228P-201ENST00000362700 Q6ZTK2 550 aa0.19□□□□□ -2.38
RNU6-228P-201ENST00000362700 LRRTM1Q86UE6 522 aa0.19□□□□□ -2.38
RNU6-228P-201ENST00000362700 TMED6Q8WW62 240 aa0.19□□□□□ -2.38
RNU6-228P-201ENST00000362700 ZNF496Q96IT1 587 aaPredicted RBP0.19□□□□□ -2.38
RNU6-228P-201ENST00000362700 HS6ST2Q96MM7 605 aa0.19□□□□□ -2.38
RNU6-228P-201ENST00000362700 FIZ1Q96SL8 496 aa0.19□□□□□ -2.38
RNU6-228P-201ENST00000362700 DPCDQ9BVM2 203 aaPredicted RBP0.19□□□□□ -2.38
RNU6-228P-201ENST00000362700 C11orf54Q9H0W9 315 aaPredicted RBP0.19□□□□□ -2.38
RNU6-228P-201ENST00000362700 PLAC1Q9HBJ0 212 aa0.19□□□□□ -2.38
RNU6-228P-201ENST00000362700 PRDM8Q9NQV8 689 aa0.19□□□□□ -2.38
RNU6-228P-201ENST00000362700 SIRT3Q9NTG7 399 aaPredicted RBP0.19□□□□□ -2.38
RNU6-228P-201ENST00000362700 NDOR1Q9UHB4 597 aa0.19□□□□□ -2.38
RNU6-228P-201ENST00000362700 TMPRSS11EQ9UL52 423 aa0.19□□□□□ -2.38
RNU6-228P-201ENST00000362700 SIRT4Q9Y6E7 314 aaPredicted RBP0.19□□□□□ -2.38
RNU6-228P-201ENST00000362700 SAA2-SAA4A0A096LPE2 208 aa0.18□□□□□ -2.38
RNU6-228P-201ENST00000362700 LOC101059915A0A1B0GWI6 518 aaPredicted RBP0.18□□□□□ -2.38
RNU6-228P-201ENST00000362700 A0A1W2PPI3 338 aa0.18□□□□□ -2.38
RNU6-228P-201ENST00000362700 NDUFAF8A1L188 74 aa0.18□□□□□ -2.38
RNU6-228P-201ENST00000362700 AP4M1O00189 453 aa0.18□□□□□ -2.38
RNU6-228P-201ENST00000362700 RGS14O43566 566 aa0.18□□□□□ -2.38
RNU6-228P-201ENST00000362700 ZNF26P17031 533 aaPredicted RBP0.18□□□□□ -2.38
RNU6-228P-201ENST00000362700 KCNA6P17658 529 aa0.18□□□□□ -2.38
RNU6-228P-201ENST00000362700 CLK1P49759 484 aaKnown RBP0.18□□□□□ -2.38
RNU6-228P-201ENST00000362700 SLC12A2P55011 1212 aa0.18□□□□□ -2.38
RNU6-228P-201ENST00000362700 ABATP80404 500 aa0.18□□□□□ -2.38
RNU6-228P-201ENST00000362700 MTM1Q13496 603 aa0.18□□□□□ -2.38
RNU6-228P-201ENST00000362700 LRRC32Q14392 662 aa0.18□□□□□ -2.38
RNU6-228P-201ENST00000362700 RFTN1Q14699 578 aaPredicted RBP0.18□□□□□ -2.38
RNU6-228P-201ENST00000362700 KCNB1Q14721 858 aa0.18□□□□□ -2.38
RNU6-228P-201ENST00000362700 DALRD3Q5D0E6 543 aaKnown RBP0.18□□□□□ -2.38
RNU6-228P-201ENST00000362700 TAF2Q6P1X5 1199 aa0.18□□□□□ -2.38
RNU6-228P-201ENST00000362700 DDX53Q86TM3 631 aaKnown RBP0.18□□□□□ -2.38
RNU6-228P-201ENST00000362700 LYSMD2Q8IV50 215 aa0.18□□□□□ -2.38
RNU6-228P-201ENST00000362700 MAB21L3Q8N8X9 362 aa0.18□□□□□ -2.38
RNU6-228P-201ENST00000362700 LILRB1Q8NHL6 650 aaPredicted RBP0.18□□□□□ -2.38
RNU6-228P-201ENST00000362700 ADAMTS14Q8WXS8 1223 aa0.18□□□□□ -2.38
RNU6-228P-201ENST00000362700 ORAI3Q9BRQ5 295 aa0.18□□□□□ -2.38
RNU6-228P-201ENST00000362700 ISCUQ9H1K1 167 aa0.18□□□□□ -2.38
RNU6-228P-201ENST00000362700 SLC52A2Q9HAB3 445 aa0.18□□□□□ -2.38
RNU6-228P-201ENST00000362700 ZNF334Q9HCZ1 680 aaPredicted RBP0.18□□□□□ -2.38
RNU6-228P-201ENST00000362700 CABP5Q9NP86 173 aa0.18□□□□□ -2.38
RNU6-228P-201ENST00000362700 DDX41Q9UJV9 622 aaKnown RBP0.18□□□□□ -2.38
RNU6-228P-201ENST00000362700 AGO2Q9UKV8 859 aaKnown RBP0.18□□□□□ -2.38
RNU6-228P-201ENST00000362700 PRAC2D3DTV9 90 aa0.17□□□□□ -2.38
RNU6-228P-201ENST00000362700 BRD1O95696 1058 aa0.17□□□□□ -2.38
RNU6-228P-201ENST00000362700 PLAUP00749 431 aa0.17□□□□□ -2.38
RNU6-228P-201ENST00000362700 FGAP02671 866 aa0.17□□□□□ -2.38
RNU6-228P-201ENST00000362700 CYP1A2P05177 515 aa0.17□□□□□ -2.38
RNU6-228P-201ENST00000362700 ACADSP16219 412 aa0.17□□□□□ -2.38
RNU6-228P-201ENST00000362700 GRSF1Q12849 480 aaKnown RBP eCLIP0.17□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms