RNA–Protein interactions for RNA: ENST00000362378.1

RNU6-28P-201, Transcript of RNA, U6 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6-28P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-28P-201ENST00000362378 HNRNPMP52272 730 aaKnown RBP eCLIP4.31□□□□□ -1.72
RNU6-28P-201ENST00000362378 PRKAA2P54646 552 aa4.31□□□□□ -1.72
RNU6-28P-201ENST00000362378 ADAM17P78536 824 aa4.31□□□□□ -1.72
RNU6-28P-201ENST00000362378 SLC25A3Q00325 362 aa4.31□□□□□ -1.72
RNU6-28P-201ENST00000362378 ITIH3Q06033 890 aa4.31□□□□□ -1.72
RNU6-28P-201ENST00000362378 CUL4BQ13620 913 aa4.31□□□□□ -1.72
RNU6-28P-201ENST00000362378 MAPRE1Q15691 268 aaKnown RBP4.31□□□□□ -1.72
RNU6-28P-201ENST00000362378 LY6KQ17RY6 165 aa4.31□□□□□ -1.72
RNU6-28P-201ENST00000362378 TTC22Q5TAA0 569 aa4.31□□□□□ -1.72
RNU6-28P-201ENST00000362378 ANKRD45Q5TZF3 282 aa4.31□□□□□ -1.72
RNU6-28P-201ENST00000362378 SLC9A4Q6AI14 798 aa4.31□□□□□ -1.72
RNU6-28P-201ENST00000362378 ZNF585AQ6P3V2 769 aa4.31□□□□□ -1.72
RNU6-28P-201ENST00000362378 RINLQ6ZS11 566 aa4.31□□□□□ -1.72
RNU6-28P-201ENST00000362378 LRRTM4Q86VH4 590 aa4.31□□□□□ -1.72
RNU6-28P-201ENST00000362378 TTC30AQ86WT1 665 aa4.31□□□□□ -1.72
RNU6-28P-201ENST00000362378 SLC30A5Q8TAD4 765 aa4.31□□□□□ -1.72
RNU6-28P-201ENST00000362378 HERVK_113Q902F9 699 aa4.31□□□□□ -1.72
RNU6-28P-201ENST00000362378 RSPRY1Q96DX4 576 aa4.31□□□□□ -1.72
RNU6-28P-201ENST00000362378 LOXL4Q96JB6 756 aa4.31□□□□□ -1.72
RNU6-28P-201ENST00000362378 MPP4Q96JB8 637 aa4.31□□□□□ -1.72
RNU6-28P-201ENST00000362378 TRAPPC9Q96Q05 1148 aa4.31□□□□□ -1.72
RNU6-28P-201ENST00000362378 HAPLN3Q96S86 360 aa4.31□□□□□ -1.72
RNU6-28P-201ENST00000362378 EIF2AK1Q9BQI3 630 aaKnown RBP4.31□□□□□ -1.72
RNU6-28P-201ENST00000362378 PAAF1Q9BRP4 392 aa4.31□□□□□ -1.72
RNU6-28P-201ENST00000362378 TTPALQ9BTX7 342 aa4.31□□□□□ -1.72
RNU6-28P-201ENST00000362378 ACTRT3Q9BYD9 372 aa4.31□□□□□ -1.72
RNU6-28P-201ENST00000362378 TPSD1Q9BZJ3 242 aa4.31□□□□□ -1.72
RNU6-28P-201ENST00000362378 VPS16Q9H269 839 aa4.31□□□□□ -1.72
RNU6-28P-201ENST00000362378 RIC8AQ9NPQ8 531 aa4.31□□□□□ -1.72
RNU6-28P-201ENST00000362378 RXFP3Q9NSD7 469 aa4.31□□□□□ -1.72
RNU6-28P-201ENST00000362378 PARPBPQ9NWS1 579 aa4.31□□□□□ -1.72
RNU6-28P-201ENST00000362378 ST6GALNAC2Q9UJ37 374 aa4.31□□□□□ -1.72
RNU6-28P-201ENST00000362378 NFU1Q9UMS0 254 aa4.31□□□□□ -1.72
RNU6-28P-201ENST00000362378 C19orf53Q9UNZ5 99 aaPredicted RBP4.31□□□□□ -1.72
RNU6-28P-201ENST00000362378 DRG1Q9Y295 367 aaKnown RBP4.31□□□□□ -1.72
RNU6-28P-201ENST00000362378 FER1L4A9Z1Z3 1794 aa4.31□□□□□ -1.72
RNU6-28P-201ENST00000362378 GXYLT2A0PJZ3 443 aa4.3□□□□□ -1.72
RNU6-28P-201ENST00000362378 EFCAB8A8MWE9 144 aa4.3□□□□□ -1.72
RNU6-28P-201ENST00000362378 HMGB1P1B2RPK0 211 aaPredicted RBP4.3□□□□□ -1.72
RNU6-28P-201ENST00000362378 SLC16A3O15427 465 aaKnown RBP4.3□□□□□ -1.72
RNU6-28P-201ENST00000362378 SPDEFO95238 335 aa4.3□□□□□ -1.72
RNU6-28P-201ENST00000362378 LMNAP02545 664 aaKnown RBP4.3□□□□□ -1.72
RNU6-28P-201ENST00000362378 CD19P15391 556 aa4.3□□□□□ -1.72
RNU6-28P-201ENST00000362378 LAG3P18627 525 aa4.3□□□□□ -1.72
RNU6-28P-201ENST00000362378 AARSP49588 968 aaKnown RBP eCLIP4.3□□□□□ -1.72
RNU6-28P-201ENST00000362378 NXPH1P58417 271 aa4.3□□□□□ -1.72
RNU6-28P-201ENST00000362378 ACTR2P61160 394 aa4.3□□□□□ -1.72
RNU6-28P-201ENST00000362378 TLE2Q04725 743 aa4.3□□□□□ -1.72
RNU6-28P-201ENST00000362378 MTAPQ13126 283 aa4.3□□□□□ -1.72
RNU6-28P-201ENST00000362378 CSHL1Q14406 222 aa4.3□□□□□ -1.72
RNU6-28P-201ENST00000362378 BTBD16Q32M84 506 aa4.3□□□□□ -1.72
RNU6-28P-201ENST00000362378 MSANTD2Q6P1R3 559 aa4.3□□□□□ -1.72
RNU6-28P-201ENST00000362378 CLEC9AQ6UXN8 241 aa4.3□□□□□ -1.72
RNU6-28P-201ENST00000362378 ANKS1BQ7Z6G8 1248 aa4.3□□□□□ -1.72
RNU6-28P-201ENST00000362378 GPR149Q86SP6 731 aa4.3□□□□□ -1.72
RNU6-28P-201ENST00000362378 TRABD2AQ86V40 505 aa4.3□□□□□ -1.72
RNU6-28P-201ENST00000362378 RAB11FIP4Q86YS3 637 aa4.3□□□□□ -1.72
RNU6-28P-201ENST00000362378 C2CD5Q86YS7 1000 aa4.3□□□□□ -1.72
RNU6-28P-201ENST00000362378 CPOQ8IVL8 374 aa4.3□□□□□ -1.72
RNU6-28P-201ENST00000362378 LNX2Q8N448 690 aa4.3□□□□□ -1.72
RNU6-28P-201ENST00000362378 ZNF276Q8N554 614 aa4.3□□□□□ -1.72
RNU6-28P-201ENST00000362378 METTL25Q8N6Q8 603 aa4.3□□□□□ -1.72
RNU6-28P-201ENST00000362378 B3GALNT2Q8NCR0 500 aa4.3□□□□□ -1.72
RNU6-28P-201ENST00000362378 IL17DQ8TAD2 202 aa4.3□□□□□ -1.72
RNU6-28P-201ENST00000362378 SOCS4Q8WXH5 440 aa4.3□□□□□ -1.72
RNU6-28P-201ENST00000362378 ASB12Q8WXK4 309 aa4.3□□□□□ -1.72
RNU6-28P-201ENST00000362378 LPIN2Q92539 896 aa4.3□□□□□ -1.72
RNU6-28P-201ENST00000362378 BDH2Q9BUT1 245 aa4.3□□□□□ -1.72
RNU6-28P-201ENST00000362378 KLC2Q9H0B6 622 aa4.3□□□□□ -1.72
RNU6-28P-201ENST00000362378 TAF1DQ9H5J8 278 aaPredicted RBP4.3□□□□□ -1.72
RNU6-28P-201ENST00000362378 SEPSECSQ9HD40 501 aaKnown RBP4.3□□□□□ -1.72
RNU6-28P-201ENST00000362378 G6PC2Q9NQR9 355 aa4.3□□□□□ -1.72
RNU6-28P-201ENST00000362378 RASSF1Q9NS23 344 aa4.3□□□□□ -1.72
RNU6-28P-201ENST00000362378 GGA3Q9NZ52 723 aa4.3□□□□□ -1.72
RNU6-28P-201ENST00000362378 STEAP1Q9UHE8 339 aa4.3□□□□□ -1.72
RNU6-28P-201ENST00000362378 CNTN6Q9UQ52 1028 aa4.3□□□□□ -1.72
RNU6-28P-201ENST00000362378 CRYL1Q9Y2S2 319 aa4.3□□□□□ -1.72
RNU6-28P-201ENST00000362378 A1L4Q6 167 aa4.29□□□□□ -1.72
RNU6-28P-201ENST00000362378 J3KRW8 73 aa4.29□□□□□ -1.72
RNU6-28P-201ENST00000362378 EXOC5O00471 708 aa4.29□□□□□ -1.72
RNU6-28P-201ENST00000362378 KIAA0355O15063 1070 aa4.29□□□□□ -1.72
RNU6-28P-201ENST00000362378 MUSKO15146 869 aa4.29□□□□□ -1.72
RNU6-28P-201ENST00000362378 EPB41L2O43491 1005 aaKnown RBP4.29□□□□□ -1.72
RNU6-28P-201ENST00000362378 LPXNO60711 386 aa4.29□□□□□ -1.72
RNU6-28P-201ENST00000362378 RPP40O75818 363 aaKnown RBP4.29□□□□□ -1.72
RNU6-28P-201ENST00000362378 WDR47O94967 919 aa4.29□□□□□ -1.72
RNU6-28P-201ENST00000362378 PEX11BO96011 259 aa4.29□□□□□ -1.72
RNU6-28P-201ENST00000362378 ERBB2P04626 1255 aa4.29□□□□□ -1.72
RNU6-28P-201ENST00000362378 PDHA1P08559 390 aa4.29□□□□□ -1.72
RNU6-28P-201ENST00000362378 AKT1P31749 480 aa4.29□□□□□ -1.72
RNU6-28P-201ENST00000362378 MTHFSP49914 203 aa4.29□□□□□ -1.72
RNU6-28P-201ENST00000362378 GUCY1B3Q02153 619 aa4.29□□□□□ -1.72
RNU6-28P-201ENST00000362378 SMAD1Q15797 465 aaKnown RBP4.29□□□□□ -1.72
RNU6-28P-201ENST00000362378 SLC4A8Q2Y0W8 1093 aa4.29□□□□□ -1.72
RNU6-28P-201ENST00000362378 TEDDM1Q5T9Z0 273 aa4.29□□□□□ -1.72
RNU6-28P-201ENST00000362378 VWA1Q6PCB0 445 aa4.29□□□□□ -1.72
RNU6-28P-201ENST00000362378 PIK3AP1Q6ZUJ8 805 aa4.29□□□□□ -1.72
RNU6-28P-201ENST00000362378 MAVSQ7Z434 540 aa4.29□□□□□ -1.72
RNU6-28P-201ENST00000362378 TMTC1Q8IUR5 882 aa4.29□□□□□ -1.72
RNU6-28P-201ENST00000362378 C1orf210Q8IVY1 113 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms