RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 PPP2R3CQ969Q6 453 aa14.39□□□□□ -0.11
COL6A1-201ENST00000361866 NKX1-2Q9UD57 310 aaPredicted RBP14.39□□□□□ -0.11
COL6A1-201ENST00000361866 SNX13Q9Y5W8 968 aa14.39□□□□□ -0.11
COL6A1-201ENST00000361866 GOLGA4Q13439 2230 aaKnown RBP14.38□□□□□ -0.11
COL6A1-201ENST00000361866 COL1A1P02452 1464 aaPredicted RBP14.38□□□□□ -0.11
COL6A1-201ENST00000361866 RBP5P82980 135 aa14.38□□□□□ -0.11
COL6A1-201ENST00000361866 BLMHQ13867 455 aa14.38□□□□□ -0.11
COL6A1-201ENST00000361866 EFCAB12Q6NXP0 572 aa14.38□□□□□ -0.11
COL6A1-201ENST00000361866 CCDC60Q8IWA6 550 aaPredicted RBP14.38□□□□□ -0.11
COL6A1-201ENST00000361866 GSTCDQ8NEC7 633 aa14.38□□□□□ -0.11
COL6A1-201ENST00000361866 HELQQ8TDG4 1101 aa14.38□□□□□ -0.11
COL6A1-201ENST00000361866 VCPIP1Q96JH7 1222 aa14.38□□□□□ -0.11
COL6A1-201ENST00000361866 ARHGEF3Q9NR81 526 aa14.38□□□□□ -0.11
COL6A1-201ENST00000361866 WRAP73Q9P2S5 460 aaPredicted RBP14.38□□□□□ -0.11
COL6A1-201ENST00000361866 IPO11Q9UI26 975 aaKnown RBP14.38□□□□□ -0.11
COL6A1-201ENST00000361866 TTC36A6NLP5 189 aa14.38□□□□□ -0.11
COL6A1-201ENST00000361866 E7ENQ6 273 aa14.38□□□□□ -0.11
COL6A1-201ENST00000361866 M0QZ92 97 aa14.38□□□□□ -0.11
COL6A1-201ENST00000361866 SH3BP5O60239 455 aa14.38□□□□□ -0.11
COL6A1-201ENST00000361866 GLRA3O75311 464 aa14.38□□□□□ -0.11
COL6A1-201ENST00000361866 NPTXRO95502 500 aa14.38□□□□□ -0.11
COL6A1-201ENST00000361866 MAPTP10636 758 aaKnown RBP14.38□□□□□ -0.11
COL6A1-201ENST00000361866 KDELR1P24390 212 aa14.38□□□□□ -0.11
COL6A1-201ENST00000361866 SKIV2L2P42285 1042 aaKnown RBP14.38□□□□□ -0.11
COL6A1-201ENST00000361866 PKNOX1P55347 436 aa14.38□□□□□ -0.11
COL6A1-201ENST00000361866 CYLC2Q14093 348 aaPredicted RBP14.38□□□□□ -0.11
COL6A1-201ENST00000361866 MXD4Q14582 209 aaPredicted RBP14.38□□□□□ -0.11
COL6A1-201ENST00000361866 DENND1BQ6P3S1 775 aa14.38□□□□□ -0.11
COL6A1-201ENST00000361866 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.38□□□□□ -0.11
COL6A1-201ENST00000361866 HACE1Q8IYU2 909 aa14.38□□□□□ -0.11
COL6A1-201ENST00000361866 MPP4Q96JB8 637 aa14.38□□□□□ -0.11
COL6A1-201ENST00000361866 CNPY3Q9BT09 278 aa14.38□□□□□ -0.11
COL6A1-201ENST00000361866 ILKAPQ9H0C8 392 aaPredicted RBP14.38□□□□□ -0.11
COL6A1-201ENST00000361866 TCRBV9S1A1TA0A576 114 aa14.38□□□□□ -0.11
COL6A1-201ENST00000361866 SPDYE16A6NNV3 312 aaPredicted RBP14.38□□□□□ -0.11
COL6A1-201ENST00000361866 KCNK1O00180 336 aa14.38□□□□□ -0.11
COL6A1-201ENST00000361866 ALOX15BO15296 676 aa14.38□□□□□ -0.11
COL6A1-201ENST00000361866 FKBP6O75344 327 aa14.38□□□□□ -0.11
COL6A1-201ENST00000361866 CPA3P15088 417 aa14.38□□□□□ -0.11
COL6A1-201ENST00000361866 TGM2P21980 687 aa14.38□□□□□ -0.11
COL6A1-201ENST00000361866 SLC1A6P48664 564 aa14.38□□□□□ -0.11
COL6A1-201ENST00000361866 TPI1P60174 286 aa14.38□□□□□ -0.11
COL6A1-201ENST00000361866 NSUN2Q08J23 767 aaKnown RBP eCLIP14.38□□□□□ -0.11
COL6A1-201ENST00000361866 PARP6Q2NL67 630 aa14.38□□□□□ -0.11
COL6A1-201ENST00000361866 SPDYE2Q495Y8 402 aa14.38□□□□□ -0.11
COL6A1-201ENST00000361866 SCUBE3Q8IX30 993 aa14.38□□□□□ -0.11
COL6A1-201ENST00000361866 SKA2Q8WVK7 121 aaPredicted RBP14.38□□□□□ -0.11
COL6A1-201ENST00000361866 CCDC134Q9H6E4 229 aa14.38□□□□□ -0.11
COL6A1-201ENST00000361866 CYP4F12Q9HCS2 524 aa14.38□□□□□ -0.11
COL6A1-201ENST00000361866 SPDYE2BA6NHP3 402 aa14.37□□□□□ -0.11
COL6A1-201ENST00000361866 PRR5-ARHGAP8B1AHC4 643 aa14.37□□□□□ -0.11
COL6A1-201ENST00000361866 CYB561D2O14569 222 aa14.37□□□□□ -0.11
COL6A1-201ENST00000361866 SPDYE6P0CI01 402 aa14.37□□□□□ -0.11
COL6A1-201ENST00000361866 PTGER2P43116 358 aa14.37□□□□□ -0.11
COL6A1-201ENST00000361866 NAMPTP43490 491 aa14.37□□□□□ -0.11
COL6A1-201ENST00000361866 HIRAP54198 1017 aaPredicted RBP14.37□□□□□ -0.11
COL6A1-201ENST00000361866 NRLP54845 237 aa14.37□□□□□ -0.11
COL6A1-201ENST00000361866 NME5P56597 212 aa14.37□□□□□ -0.11
COL6A1-201ENST00000361866 ARHGAP8P85298 464 aa14.37□□□□□ -0.11
COL6A1-201ENST00000361866 CACNB2Q08289 660 aaPredicted RBP14.37□□□□□ -0.11
COL6A1-201ENST00000361866 OASLQ15646 514 aaKnown RBP14.37□□□□□ -0.11
COL6A1-201ENST00000361866 MTHFD1LQ6UB35 978 aa14.37□□□□□ -0.11
COL6A1-201ENST00000361866 CCNJLQ8IV13 435 aa14.37□□□□□ -0.11
COL6A1-201ENST00000361866 STKLD1Q8NE28 680 aa14.37□□□□□ -0.11
COL6A1-201ENST00000361866 BEST2Q8NFU1 509 aa14.37□□□□□ -0.11
COL6A1-201ENST00000361866 CYGBQ8WWM9 190 aa14.37□□□□□ -0.11
COL6A1-201ENST00000361866 GPRASP2Q96D09 838 aa14.37□□□□□ -0.11
COL6A1-201ENST00000361866 PRPF18Q99633 342 aaKnown RBP14.37□□□□□ -0.11
COL6A1-201ENST00000361866 TMEM109Q9BVC6 243 aa14.37□□□□□ -0.11
COL6A1-201ENST00000361866 ZNF212Q9UDV6 495 aa14.37□□□□□ -0.11
COL6A1-201ENST00000361866 BAG5Q9UL15 447 aa14.37□□□□□ -0.11
COL6A1-201ENST00000361866 DISP2A7MBM2 1401 aa14.37□□□□□ -0.11
COL6A1-201ENST00000361866 NALCNQ8IZF0 1738 aa14.37□□□□□ -0.11
COL6A1-201ENST00000361866 WDR27A2RRH5 827 aa14.37□□□□□ -0.11
COL6A1-201ENST00000361866 MAFGO15525 162 aa14.37□□□□□ -0.11
COL6A1-201ENST00000361866 HMGCRP04035 888 aa14.37□□□□□ -0.11
COL6A1-201ENST00000361866 C6orf222P0C671 652 aaPredicted RBP14.37□□□□□ -0.11
COL6A1-201ENST00000361866 MLH1P40692 756 aa14.37□□□□□ -0.11
COL6A1-201ENST00000361866 MRPS22P82650 360 aaKnown RBP14.37□□□□□ -0.11
COL6A1-201ENST00000361866 PLOD1Q02809 727 aaPredicted RBP14.37□□□□□ -0.11
COL6A1-201ENST00000361866 MPP2Q14168 576 aa14.37□□□□□ -0.11
COL6A1-201ENST00000361866 SUPT20HL1Q3ZLR7 823 aa14.37□□□□□ -0.11
COL6A1-201ENST00000361866 ZNF280CQ8ND82 737 aa14.37□□□□□ -0.11
COL6A1-201ENST00000361866 DIS3LQ8TF46 1054 aaKnown RBP14.37□□□□□ -0.11
COL6A1-201ENST00000361866 UCMAQ8WVF2 138 aa14.37□□□□□ -0.11
COL6A1-201ENST00000361866 TRAPPC12Q8WVT3 735 aa14.37□□□□□ -0.11
COL6A1-201ENST00000361866 PTPRN2Q92932 1015 aa14.37□□□□□ -0.11
COL6A1-201ENST00000361866 FAM136AQ96C01 138 aa14.37□□□□□ -0.11
COL6A1-201ENST00000361866 ACSS3Q9H6R3 686 aa14.37□□□□□ -0.11
COL6A1-201ENST00000361866 NOCTQ9UK39 431 aaKnown RBP14.37□□□□□ -0.11
COL6A1-201ENST00000361866 FZD1Q9UP38 647 aa14.37□□□□□ -0.11
COL6A1-201ENST00000361866 ZMYM2Q9UBW7 1377 aa14.37□□□□□ -0.11
COL6A1-201ENST00000361866 ADGRA3Q8IWK6 1321 aa14.37□□□□□ -0.11
COL6A1-201ENST00000361866 TPBGLP0DKB5 382 aa14.37□□□□□ -0.11
COL6A1-201ENST00000361866 ZACNQ401N2 412 aa14.37□□□□□ -0.11
COL6A1-201ENST00000361866 ANKRD22Q5VYY1 191 aa14.37□□□□□ -0.11
COL6A1-201ENST00000361866 C16orf89Q6UX73 402 aa14.37□□□□□ -0.11
COL6A1-201ENST00000361866 ZNF570Q96NI8 536 aa14.37□□□□□ -0.11
COL6A1-201ENST00000361866 ZMYND8Q9ULU4 1186 aaPredicted RBP14.37□□□□□ -0.11
COL6A1-201ENST00000361866 SDR42E2A6NKP2 422 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms