RNA–Protein interactions for RNA: ENST00000361575.3

RPL39-201, Transcript of ribosomal protein L39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL39, Length 401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39-201ENST00000361575 OTOL1A6NHN0 477 aaPredicted RBP5.63□□□□□ -1.51
RPL39-201ENST00000361575 B4E171 279 aa5.63□□□□□ -1.51
RPL39-201ENST00000361575 E7EVH7 732 aa5.63□□□□□ -1.51
RPL39-201ENST00000361575 MAN1A1P33908 653 aa5.63□□□□□ -1.51
RPL39-201ENST00000361575 TSPAN7P41732 249 aa5.63□□□□□ -1.51
RPL39-201ENST00000361575 AARSP49588 968 aaKnown RBP eCLIP5.63□□□□□ -1.51
RPL39-201ENST00000361575 HHEXQ03014 270 aa5.63□□□□□ -1.51
RPL39-201ENST00000361575 UBE3AQ05086 875 aa5.63□□□□□ -1.51
RPL39-201ENST00000361575 CHRNDQ07001 517 aa5.63□□□□□ -1.51
RPL39-201ENST00000361575 ACOX1Q15067 660 aa5.63□□□□□ -1.51
RPL39-201ENST00000361575 DLGAP5Q15398 846 aa5.63□□□□□ -1.51
RPL39-201ENST00000361575 MAP3K21Q5TCX8 1036 aa5.63□□□□□ -1.51
RPL39-201ENST00000361575 SLC9A4Q6AI14 798 aa5.63□□□□□ -1.51
RPL39-201ENST00000361575 SFRP4Q6FHJ7 346 aaPredicted RBP5.63□□□□□ -1.51
RPL39-201ENST00000361575 FOXR2Q6PJQ5 311 aa5.63□□□□□ -1.51
RPL39-201ENST00000361575 CLEC9AQ6UXN8 241 aa5.63□□□□□ -1.51
RPL39-201ENST00000361575 C11orf44Q8N8P7 122 aa5.63□□□□□ -1.51
RPL39-201ENST00000361575 PCYOX1LQ8NBM8 494 aa5.63□□□□□ -1.51
RPL39-201ENST00000361575 C3orf49Q96BT1 292 aa5.63□□□□□ -1.51
RPL39-201ENST00000361575 ADAM2Q99965 735 aa5.63□□□□□ -1.51
RPL39-201ENST00000361575 UNC45AQ9H3U1 944 aa5.63□□□□□ -1.51
RPL39-201ENST00000361575 UNKLQ9H9P5 680 aaKnown RBP5.63□□□□□ -1.51
RPL39-201ENST00000361575 SMC4Q9NTJ3 1288 aa5.63□□□□□ -1.51
RPL39-201ENST00000361575 SCINQ9Y6U3 715 aa5.63□□□□□ -1.51
RPL39-201ENST00000361575 GXYLT2A0PJZ3 443 aa5.62□□□□□ -1.51
RPL39-201ENST00000361575 M0QZQ0 153 aa5.62□□□□□ -1.51
RPL39-201ENST00000361575 PPM1DO15297 605 aa5.62□□□□□ -1.51
RPL39-201ENST00000361575 KRT38O76015 456 aa5.62□□□□□ -1.51
RPL39-201ENST00000361575 NCR1O76036 304 aa5.62□□□□□ -1.51
RPL39-201ENST00000361575 RECQL4O94761 1208 aa5.62□□□□□ -1.51
RPL39-201ENST00000361575 SCAF4O95104 1147 aaKnown RBP5.62□□□□□ -1.51
RPL39-201ENST00000361575 TBX18O95935 607 aa5.62□□□□□ -1.51
RPL39-201ENST00000361575 LDHCP07864 332 aa5.62□□□□□ -1.51
RPL39-201ENST00000361575 CNPP09543 421 aaKnown RBP5.62□□□□□ -1.51
RPL39-201ENST00000361575 YY1P25490 414 aa5.62□□□□□ -1.51
RPL39-201ENST00000361575 ZEB1P37275 1124 aaPredicted RBP5.62□□□□□ -1.51
RPL39-201ENST00000361575 PBX1P40424 430 aa5.62□□□□□ -1.51
RPL39-201ENST00000361575 CDK7P50613 346 aa5.62□□□□□ -1.51
RPL39-201ENST00000361575 VAV2P52735 878 aa5.62□□□□□ -1.51
RPL39-201ENST00000361575 ATXN1P54253 815 aaKnown RBP5.62□□□□□ -1.51
RPL39-201ENST00000361575 TIRAPP58753 221 aa5.62□□□□□ -1.51
RPL39-201ENST00000361575 ADAM17P78536 824 aa5.62□□□□□ -1.51
RPL39-201ENST00000361575 FPGSQ05932 587 aa5.62□□□□□ -1.51
RPL39-201ENST00000361575 SLC12A1Q13621 1099 aa5.62□□□□□ -1.51
RPL39-201ENST00000361575 TOB2Q14106 344 aaPredicted RBP5.62□□□□□ -1.51
RPL39-201ENST00000361575 ICAM4Q14773 271 aa5.62□□□□□ -1.51
RPL39-201ENST00000361575 NBPF8Q3BBV2 869 aa5.62□□□□□ -1.51
RPL39-201ENST00000361575 PREPLQ4J6C6 727 aaPredicted RBP5.62□□□□□ -1.51
RPL39-201ENST00000361575 SP5Q6BEB4 398 aaPredicted RBP5.62□□□□□ -1.51
RPL39-201ENST00000361575 SYT13Q7L8C5 426 aa5.62□□□□□ -1.51
RPL39-201ENST00000361575 TRABD2AQ86V40 505 aa5.62□□□□□ -1.51
RPL39-201ENST00000361575 IZUMO1Q8IYV9 350 aa5.62□□□□□ -1.51
RPL39-201ENST00000361575 CEP70Q8NHQ1 597 aa5.62□□□□□ -1.51
RPL39-201ENST00000361575 FAM136AQ96C01 138 aa5.62□□□□□ -1.51
RPL39-201ENST00000361575 RRP36Q96EU6 259 aaKnown RBP5.62□□□□□ -1.51
RPL39-201ENST00000361575 WDYHV1Q96HA8 205 aa5.62□□□□□ -1.51
RPL39-201ENST00000361575 FMNL2Q96PY5 1086 aa5.62□□□□□ -1.51
RPL39-201ENST00000361575 VN1R3Q9BXE9 311 aa5.62□□□□□ -1.51
RPL39-201ENST00000361575 CD248Q9HCU0 757 aa5.62□□□□□ -1.51
RPL39-201ENST00000361575 TMEM74BQ9NUR3 256 aa5.62□□□□□ -1.51
RPL39-201ENST00000361575 DKK2Q9UBU2 259 aa5.62□□□□□ -1.51
RPL39-201ENST00000361575 USP22Q9UPT9 525 aa5.62□□□□□ -1.51
RPL39-201ENST00000361575 LOC105369274A0A096LPK9 316 aa5.61□□□□□ -1.51
RPL39-201ENST00000361575 LOC102723532A0A0G2JNH3 316 aa5.61□□□□□ -1.51
RPL39-201ENST00000361575 M0QYT0 321 aa5.61□□□□□ -1.51
RPL39-201ENST00000361575 TRIAP1O43715 76 aa5.61□□□□□ -1.51
RPL39-201ENST00000361575 HLA-DOAP06340 250 aa5.61□□□□□ -1.51
RPL39-201ENST00000361575 C8AP07357 584 aa5.61□□□□□ -1.51
RPL39-201ENST00000361575 PPP3CBP16298 524 aa5.61□□□□□ -1.51
RPL39-201ENST00000361575 NR4A1P22736 598 aa5.61□□□□□ -1.51
RPL39-201ENST00000361575 EPHA3P29320 983 aa5.61□□□□□ -1.51
RPL39-201ENST00000361575 SERPINA4P29622 427 aa5.61□□□□□ -1.51
RPL39-201ENST00000361575 PRKAR1BP31321 381 aa5.61□□□□□ -1.51
RPL39-201ENST00000361575 HIBADHP31937 336 aaKnown RBP5.61□□□□□ -1.51
RPL39-201ENST00000361575 ELF1P32519 619 aa5.61□□□□□ -1.51
RPL39-201ENST00000361575 CASP2P42575 452 aa5.61□□□□□ -1.51
RPL39-201ENST00000361575 FAM3BP58499 235 aaPredicted RBP5.61□□□□□ -1.51
RPL39-201ENST00000361575 SF3A3Q12874 501 aaKnown RBP eCLIP5.61□□□□□ -1.51
RPL39-201ENST00000361575 TRPC3Q13507 836 aa5.61□□□□□ -1.51
RPL39-201ENST00000361575 CLCA4Q14CN2 919 aa5.61□□□□□ -1.51
RPL39-201ENST00000361575 PKN1Q16512 942 aa5.61□□□□□ -1.51
RPL39-201ENST00000361575 BEAN1Q3B7T3 259 aa5.61□□□□□ -1.51
RPL39-201ENST00000361575 TMEM196Q5HYL7 178 aa5.61□□□□□ -1.51
RPL39-201ENST00000361575 SLC9C2Q5TAH2 1124 aa5.61□□□□□ -1.51
RPL39-201ENST00000361575 FAM90A2PQ658T7 463 aa5.61□□□□□ -1.51
RPL39-201ENST00000361575 MAVSQ7Z434 540 aa5.61□□□□□ -1.51
RPL39-201ENST00000361575 OR4N4Q8N0Y3 316 aa5.61□□□□□ -1.51
RPL39-201ENST00000361575 SUPT20HQ8NEM7 779 aa5.61□□□□□ -1.51
RPL39-201ENST00000361575 OSCP1Q8WVF1 389 aa5.61□□□□□ -1.51
RPL39-201ENST00000361575 ATRIPQ8WXE1 791 aa5.61□□□□□ -1.51
RPL39-201ENST00000361575 FUBP1Q96AE4 644 aaKnown RBP5.61□□□□□ -1.51
RPL39-201ENST00000361575 RNF31Q96EP0 1072 aa5.61□□□□□ -1.51
RPL39-201ENST00000361575 BOD1Q96IK1 185 aa5.61□□□□□ -1.51
RPL39-201ENST00000361575 PAAF1Q9BRP4 392 aa5.61□□□□□ -1.51
RPL39-201ENST00000361575 ALOXE3Q9BYJ1 711 aa5.61□□□□□ -1.51
RPL39-201ENST00000361575 INO80BQ9C086 356 aaPredicted RBP5.61□□□□□ -1.51
RPL39-201ENST00000361575 CHODLQ9H9P2 273 aa5.61□□□□□ -1.51
RPL39-201ENST00000361575 DRG1Q9Y295 367 aaKnown RBP5.61□□□□□ -1.51
RPL39-201ENST00000361575 DNAJC16Q9Y2G8 782 aa5.61□□□□□ -1.51
RPL39-201ENST00000361575 SLC38A8A6NNN8 435 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms