RNA–Protein interactions for RNA: ENST00000361490.8

HPS1-204, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS1, Length 3,678 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-204ENST00000361490 KATNAL2Q8IYT4 538 aa12.13□□□□□ -0.47
HPS1-204ENST00000361490 GDAP1Q8TB36 358 aa12.13□□□□□ -0.47
HPS1-204ENST00000361490 DEPDC1BQ8WUY9 529 aa12.13□□□□□ -0.47
HPS1-204ENST00000361490 THOC1Q96FV9 657 aaKnown RBP12.13□□□□□ -0.47
HPS1-204ENST00000361490 GOLGA8RI6L899 631 aa12.12□□□□□ -0.47
HPS1-204ENST00000361490 FSCN2O14926 492 aa12.12□□□□□ -0.47
HPS1-204ENST00000361490 CKBP12277 381 aa12.12□□□□□ -0.47
HPS1-204ENST00000361490 CYP2C18P33260 490 aa12.12□□□□□ -0.47
HPS1-204ENST00000361490 ZNF143P52747 638 aaPredicted RBP12.12□□□□□ -0.47
HPS1-204ENST00000361490 GABPB1Q06547 395 aaPredicted RBP12.12□□□□□ -0.47
HPS1-204ENST00000361490 CTXN3Q4LDR2 81 aa12.12□□□□□ -0.47
HPS1-204ENST00000361490 EFHC2Q5JST6 749 aa12.12□□□□□ -0.47
HPS1-204ENST00000361490 CCDC13Q8IYE1 715 aa12.12□□□□□ -0.47
HPS1-204ENST00000361490 ATAD1Q8NBU5 361 aa12.12□□□□□ -0.47
HPS1-204ENST00000361490 C3orf58Q8NDZ4 430 aa12.12□□□□□ -0.47
HPS1-204ENST00000361490 OLIG1Q8TAK6 271 aa12.12□□□□□ -0.47
HPS1-204ENST00000361490 MYLPFQ96A32 169 aa12.12□□□□□ -0.47
HPS1-204ENST00000361490 CELF6Q96J87 481 aaKnown RBP12.12□□□□□ -0.47
HPS1-204ENST00000361490 TMEM209Q96SK2 561 aa12.12□□□□□ -0.47
HPS1-204ENST00000361490 LHX5Q9H2C1 402 aa12.12□□□□□ -0.47
HPS1-204ENST00000361490 HCSTQ9UBK5 93 aa12.12□□□□□ -0.47
HPS1-204ENST00000361490 RLFQ13129 1914 aa12.12□□□□□ -0.47
HPS1-204ENST00000361490 KCNK1O00180 336 aa12.12□□□□□ -0.47
HPS1-204ENST00000361490 PECAM1P16284 738 aaPredicted RBP12.12□□□□□ -0.47
HPS1-204ENST00000361490 SAT1P21673 171 aa12.12□□□□□ -0.47
HPS1-204ENST00000361490 EPHB2P29323 1055 aa12.12□□□□□ -0.47
HPS1-204ENST00000361490 FNTAP49354 379 aa12.12□□□□□ -0.47
HPS1-204ENST00000361490 CTCFP49711 727 aaPredicted RBP12.12□□□□□ -0.47
HPS1-204ENST00000361490 ZNF252P-AS1Q0IIN9 211 aa12.12□□□□□ -0.47
HPS1-204ENST00000361490 SLMAPQ14BN4 828 aa12.12□□□□□ -0.47
HPS1-204ENST00000361490 ZKSCAN8Q15776 578 aaPredicted RBP12.12□□□□□ -0.47
HPS1-204ENST00000361490 EFHC1Q5JVL4 640 aa12.12□□□□□ -0.47
HPS1-204ENST00000361490 TMC3Q7Z5M5 1100 aa12.12□□□□□ -0.47
HPS1-204ENST00000361490 IFNLR1Q8IU57 520 aaPredicted RBP12.12□□□□□ -0.47
HPS1-204ENST00000361490 SCAMP5Q8TAC9 235 aa12.12□□□□□ -0.47
HPS1-204ENST00000361490 KLF6Q99612 283 aaPredicted RBP12.12□□□□□ -0.47
HPS1-204ENST00000361490 ZBED2Q9BTP6 218 aa12.12□□□□□ -0.47
HPS1-204ENST00000361490 CNTN3Q9P232 1028 aa12.12□□□□□ -0.47
HPS1-204ENST00000361490 NENFQ9UMX5 172 aa12.12□□□□□ -0.47
HPS1-204ENST00000361490 CHMP2BQ9UQN3 213 aa12.12□□□□□ -0.47
HPS1-204ENST00000361490 Q9Y3F1 56 aa12.12□□□□□ -0.47
HPS1-204ENST00000361490 A0A1W2PQ45 241 aaPredicted RBP12.12□□□□□ -0.47
HPS1-204ENST00000361490 A0A1W2PQY0 241 aa12.12□□□□□ -0.47
HPS1-204ENST00000361490 WDR91A4D1P6 747 aa12.12□□□□□ -0.47
HPS1-204ENST00000361490 HAS3O00219 553 aa12.12□□□□□ -0.47
HPS1-204ENST00000361490 CES2O00748 559 aa12.12□□□□□ -0.47
HPS1-204ENST00000361490 CAND2O75155 1236 aa12.12□□□□□ -0.47
HPS1-204ENST00000361490 SYF2O95926 243 aaKnown RBP12.12□□□□□ -0.47
HPS1-204ENST00000361490 LHX1P48742 406 aa12.12□□□□□ -0.47
HPS1-204ENST00000361490 CCNG2Q16589 344 aa12.12□□□□□ -0.47
HPS1-204ENST00000361490 BOLA3Q53S33 107 aa12.12□□□□□ -0.47
HPS1-204ENST00000361490 HEATR6Q6AI08 1181 aaKnown RBP12.12□□□□□ -0.47
HPS1-204ENST00000361490 HFE2Q6ZVN8 426 aa12.12□□□□□ -0.47
HPS1-204ENST00000361490 UNC93AQ86WB7 457 aa12.12□□□□□ -0.47
HPS1-204ENST00000361490 FUKQ8N0W3 1084 aa12.12□□□□□ -0.47
HPS1-204ENST00000361490 PDIK1LQ8N165 341 aa12.12□□□□□ -0.47
HPS1-204ENST00000361490 DNAAF3Q8N9W5 541 aa12.12□□□□□ -0.47
HPS1-204ENST00000361490 USP6NLQ92738 828 aa12.12□□□□□ -0.47
HPS1-204ENST00000361490 TRAIPQ9BWF2 469 aa12.12□□□□□ -0.47
HPS1-204ENST00000361490 CDC42EP4Q9H3Q1 356 aaKnown RBP12.12□□□□□ -0.47
HPS1-204ENST00000361490 SNX10Q9Y5X0 201 aa12.12□□□□□ -0.47
HPS1-204ENST00000361490 DFFAO00273 331 aa12.11□□□□□ -0.47
HPS1-204ENST00000361490 TRUB2O95900 331 aaKnown RBP12.11□□□□□ -0.47
HPS1-204ENST00000361490 SESN2P58004 480 aaPredicted RBP12.11□□□□□ -0.47
HPS1-204ENST00000361490 PID1Q7Z2X4 250 aa12.11□□□□□ -0.47
HPS1-204ENST00000361490 GIPC2Q8TF65 315 aa12.11□□□□□ -0.47
HPS1-204ENST00000361490 RUNDC3BQ96NL0 473 aa12.11□□□□□ -0.47
HPS1-204ENST00000361490 UBP1Q9NZI7 540 aa12.11□□□□□ -0.47
HPS1-204ENST00000361490 KLHL8Q9P2G9 620 aaPredicted RBP12.11□□□□□ -0.47
HPS1-204ENST00000361490 DNAJB4Q9UDY4 337 aa12.11□□□□□ -0.47
HPS1-204ENST00000361490 hCG_1818297A0A087WSY0 165 aa12.11□□□□□ -0.47
HPS1-204ENST00000361490 ADAMTS4O75173 837 aa12.11□□□□□ -0.47
HPS1-204ENST00000361490 GOT1P17174 413 aa12.11□□□□□ -0.47
HPS1-204ENST00000361490 PTP4A2Q12974 167 aa12.11□□□□□ -0.47
HPS1-204ENST00000361490 CCDC14Q49A88 953 aa12.11□□□□□ -0.47
HPS1-204ENST00000361490 SYPL2Q5VXT5 272 aa12.11□□□□□ -0.47
HPS1-204ENST00000361490 DUPD1Q68J44 220 aa12.11□□□□□ -0.47
HPS1-204ENST00000361490 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.11□□□□□ -0.47
HPS1-204ENST00000361490 UNC45BQ8IWX7 931 aa12.11□□□□□ -0.47
HPS1-204ENST00000361490 ARFGAP2Q8N6H7 521 aa12.11□□□□□ -0.47
HPS1-204ENST00000361490 OTUD6BQ8N6M0 293 aa12.11□□□□□ -0.47
HPS1-204ENST00000361490 FNDC3AQ9Y2H6 1198 aaKnown RBP12.11□□□□□ -0.47
HPS1-204ENST00000361490 DCDC2CA8MYV0 355 aa12.1□□□□□ -0.47
HPS1-204ENST00000361490 ALDH2P05091 517 aa12.1□□□□□ -0.47
HPS1-204ENST00000361490 RPL17P18621 184 aaKnown RBP12.1□□□□□ -0.47
HPS1-204ENST00000361490 ITIH2P19823 946 aa12.1□□□□□ -0.47
HPS1-204ENST00000361490 RBL1P28749 1068 aa12.1□□□□□ -0.47
HPS1-204ENST00000361490 CCT5P48643 541 aa12.1□□□□□ -0.47
HPS1-204ENST00000361490 ALDH7A1P49419 539 aaKnown RBP12.1□□□□□ -0.47
HPS1-204ENST00000361490 SEC24CP53992 1094 aa12.1□□□□□ -0.47
HPS1-204ENST00000361490 TPI1P60174 286 aa12.1□□□□□ -0.47
HPS1-204ENST00000361490 NOMO2Q5JPE7 1267 aa12.1□□□□□ -0.47
HPS1-204ENST00000361490 FAM35AQ86V20 835 aa12.1□□□□□ -0.47
HPS1-204ENST00000361490 TTC13Q8NBP0 860 aa12.1□□□□□ -0.47
HPS1-204ENST00000361490 CD101Q93033 1021 aa12.1□□□□□ -0.47
HPS1-204ENST00000361490 APOL2Q9BQE5 337 aa12.1□□□□□ -0.47
HPS1-204ENST00000361490 WDCPQ9H6R7 721 aa12.1□□□□□ -0.47
HPS1-204ENST00000361490 CTNNAL1Q9UBT7 734 aa12.1□□□□□ -0.47
HPS1-204ENST00000361490 SFMBT1Q9UHJ3 866 aa12.1□□□□□ -0.47
HPS1-204ENST00000361490 XPO7Q9UIA9 1087 aaKnown RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms